Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113476694

Identifier: 113476694

GI number: 113476694

Start: 4810705

End: 4811034

Strand: Reverse

Name: 113476694

Synonym: Tery_3152

Alternate gene names: NA

Gene position: 4811034-4810705 (Counterclockwise)

Preceding gene: 113476695

Following gene: 113476693

Centisome position: 62.08

GC content: 40.3

Gene sequence:

>330_bases
ATGATTCTCGACTATTTAGTTAAAGCAGCTTTTGGAATTATCAATACCGTGGCTCCGTCTTTGACTCCACAAAGGTTCCT
TGATGGCATGAGAGATGATTTTGACCCCAATTTATCAGATGAAGAAAACAAGAAAATAATGATGCAAAAAATCCGTGGAG
GTAAATTGGGAACAGGTTTAGCGGAGGTGGCTTCTTACGAACCAGGAACCGATAGAAATTTTGAAGAGGTATTAGCGGAA
GTTGAGTCTTCACAGCTAAAAAAACAGCCTACTTCCGTTGTAGAGGTAGGGGAAGAAAACGAGCAAAAGACACAGAAATT
CCAGTCTTGA

Upstream 100 bases:

>100_bases
AAATTTAAGGGTAAAGCTAGTCAAACTGCTAGTACGCCAAGTAAAGGAGAGGACAGCAGTGCTTTTATCGACTAAACACA
CTAACAGGAGTTAAAAATAC

Downstream 100 bases:

>100_bases
AGTTTCTCAAAATTAATGTTAACTTAAGCAAAACAACTTGATAGTGAGGAGAAAAAATGTCGGTTTGGACTGAATTCTTA
AAGACTGTCGCTAAAGAAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 109; Mature: 109

Protein sequence:

>109_residues
MILDYLVKAAFGIINTVAPSLTPQRFLDGMRDDFDPNLSDEENKKIMMQKIRGGKLGTGLAEVASYEPGTDRNFEEVLAE
VESSQLKKQPTSVVEVGEENEQKTQKFQS

Sequences:

>Translated_109_residues
MILDYLVKAAFGIINTVAPSLTPQRFLDGMRDDFDPNLSDEENKKIMMQKIRGGKLGTGLAEVASYEPGTDRNFEEVLAE
VESSQLKKQPTSVVEVGEENEQKTQKFQS
>Mature_109_residues
MILDYLVKAAFGIINTVAPSLTPQRFLDGMRDDFDPNLSDEENKKIMMQKIRGGKLGTGLAEVASYEPGTDRNFEEVLAE
VESSQLKKQPTSVVEVGEENEQKTQKFQS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12168; Mature: 12168

Theoretical pI: Translated: 4.38; Mature: 4.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILDYLVKAAFGIINTVAPSLTPQRFLDGMRDDFDPNLSDEENKKIMMQKIRGGKLGTGL
CHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCHH
AEVASYEPGTDRNFEEVLAEVESSQLKKQPTSVVEVGEENEQKTQKFQS
HHHHCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHCCC
>Mature Secondary Structure
MILDYLVKAAFGIINTVAPSLTPQRFLDGMRDDFDPNLSDEENKKIMMQKIRGGKLGTGL
CHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCHH
AEVASYEPGTDRNFEEVLAEVESSQLKKQPTSVVEVGEENEQKTQKFQS
HHHHCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA