| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is ywrD [H]
Identifier: 113476240
GI number: 113476240
Start: 4080432
End: 4082018
Strand: Reverse
Name: ywrD [H]
Synonym: Tery_2633
Alternate gene names: 113476240
Gene position: 4082018-4080432 (Counterclockwise)
Preceding gene: 113476241
Following gene: 113476239
Centisome position: 52.67
GC content: 39.07
Gene sequence:
>1587_bases ATGCGTAATTTTCATAAACCCGAAAGATCAGAAGTGTTTTCACAGAATGGAATGATAGCAACTTCTCATCCTCTAGCTGC CAAAATTGGTCTTGATACCATGTCCCATGGAGGGAACGCCATAGATGCTGCCATCAGCGCCGCTTTGATGCTCACCTTAT GTGAACCACAAAGTACCGGGCTCTACGGCGATGCCTTTGTCATTTTAAAATCCCAAAAAAGTGATAAACTCATTGGAATA AACGGCTCCGGGAACTCCCCCAAGGCAATATCTAGTGATCTGCTCCTCCAAAAAGGCTTGAATAAAATTCCCATTAACAG CGTGCATTCAATTACACTTCCAGGAGCTGTAGCCTTATTTGAGGAATTAGCTCTTAAATTCAGTAATTTAGGGTTAGCAG AATTATGTAAAGCATCTATTAAATACGCCGAAGAAGGAGTAGTAGTCAGTCCTAGAGTGGCTTTTGACTGGCGCTTAAAT AATTTGAAATTTTCTCAAACCACCAAAAAATTCTACTTGGTTGATGGTAAAGTGCCTGAAACTGGGTCAATTTTTAGAGC TCCAAAGCAAGCGGAAGTTTTGAGAAAAATCCAAAAAAATGGCTCAAAAGGGTTTTATCAGTCTGAGGTTACAGAAGATC TTGTTAAGTCTTTACAAAACTTGGGGGGAGTTCACACTTTAGATGATTTTGCTAACGTGACATTTGAATATGTAGAGCCA ATTTTCTCCAATTTTCAAGATGGAAGTAAATTATTTGAGCTGCCTCCTAATGGGCAAGGTATAACTGCTATCATGATCCG GAAACTCATGGAAATTTGCAACATTCAAGAACATTCTCCATATTCTGCTAACAGGGTACACTTAGAGGCAGAGATCGCAA AGCTTGCATATACTGCCAGAAATGCTTTTATTGGAGATCCTAAGTTTTCCCAAATTAAAGAACACTTCTTTTTAGACTCA GCTTTTCTGGAAAAAATTGCTCAACAAATATCTCTCAACAAACTAATAGATGGAAGCGGCATCCAATATTTTGATGAAAA ACCAAAAGATACCGTTTTAATATCTGCTGCAGATAAAGACGGAAACGCTATCTCTTTAATTTTTTCAAATTTTGATTCGT TTGGTACTGGAAAATGCTCTGAAAAATACGGTCTCATTTTTCATAACCGCGGAGCTAGTTTTGTTCTTGAGAAAAACCAT CCTAATGAACTTGAAGGAAATAAAAGACCCTTGCATACTATCATACCTGCTATTTTTAAAGGTAAAAATGACATGATCAT GGCTTTTGGGGTTATGGGTGGAGACTACCAACCTTATGGTCATGCTCGCATTCTTAGTAATCTTTTTGACTACAGTATGG ACCCGCAGTCAGCAATAAATTTTCCCAGAAGTTTTTTCTTTAACGGGGTTTTAAAACTAGAAGAGGGCTATGACGAAAAC GTAGCGGAAGCTTTGACAAGCATAGGTCACAAGATAGTAAGACCCATCGCACCAATAGGAGGGGCTCAGTTGGTCATTTG TGACCCATCGGGAGTCTTAATAGGGGCTTCAGATCCCAGGAAAGATGGTTGTGCTCTTGGAATTTAG
Upstream 100 bases:
>100_bases TGTTTGAGATGAATTTGCGGAGGGGTCTAATAGAAAAAAATGCATAATTTTTAAATTTAAATGTTTGAGATGAATTTTCA GAGGGGTCTAATAGAAAAAA
Downstream 100 bases:
>100_bases GGTTTTCTGATGCACCCGTTAGCATTCGTATAATTAGATAGTTAATTAGGGGTTATAAATTAGGAGGAAAGAGAATTTAG AAAGTTTGCTCGTTGCTCAA
Product: gamma-glutamyltransferase 2
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 528; Mature: 528
Protein sequence:
>528_residues MRNFHKPERSEVFSQNGMIATSHPLAAKIGLDTMSHGGNAIDAAISAALMLTLCEPQSTGLYGDAFVILKSQKSDKLIGI NGSGNSPKAISSDLLLQKGLNKIPINSVHSITLPGAVALFEELALKFSNLGLAELCKASIKYAEEGVVVSPRVAFDWRLN NLKFSQTTKKFYLVDGKVPETGSIFRAPKQAEVLRKIQKNGSKGFYQSEVTEDLVKSLQNLGGVHTLDDFANVTFEYVEP IFSNFQDGSKLFELPPNGQGITAIMIRKLMEICNIQEHSPYSANRVHLEAEIAKLAYTARNAFIGDPKFSQIKEHFFLDS AFLEKIAQQISLNKLIDGSGIQYFDEKPKDTVLISAADKDGNAISLIFSNFDSFGTGKCSEKYGLIFHNRGASFVLEKNH PNELEGNKRPLHTIIPAIFKGKNDMIMAFGVMGGDYQPYGHARILSNLFDYSMDPQSAINFPRSFFFNGVLKLEEGYDEN VAEALTSIGHKIVRPIAPIGGAQLVICDPSGVLIGASDPRKDGCALGI
Sequences:
>Translated_528_residues MRNFHKPERSEVFSQNGMIATSHPLAAKIGLDTMSHGGNAIDAAISAALMLTLCEPQSTGLYGDAFVILKSQKSDKLIGI NGSGNSPKAISSDLLLQKGLNKIPINSVHSITLPGAVALFEELALKFSNLGLAELCKASIKYAEEGVVVSPRVAFDWRLN NLKFSQTTKKFYLVDGKVPETGSIFRAPKQAEVLRKIQKNGSKGFYQSEVTEDLVKSLQNLGGVHTLDDFANVTFEYVEP IFSNFQDGSKLFELPPNGQGITAIMIRKLMEICNIQEHSPYSANRVHLEAEIAKLAYTARNAFIGDPKFSQIKEHFFLDS AFLEKIAQQISLNKLIDGSGIQYFDEKPKDTVLISAADKDGNAISLIFSNFDSFGTGKCSEKYGLIFHNRGASFVLEKNH PNELEGNKRPLHTIIPAIFKGKNDMIMAFGVMGGDYQPYGHARILSNLFDYSMDPQSAINFPRSFFFNGVLKLEEGYDEN VAEALTSIGHKIVRPIAPIGGAQLVICDPSGVLIGASDPRKDGCALGI >Mature_528_residues MRNFHKPERSEVFSQNGMIATSHPLAAKIGLDTMSHGGNAIDAAISAALMLTLCEPQSTGLYGDAFVILKSQKSDKLIGI NGSGNSPKAISSDLLLQKGLNKIPINSVHSITLPGAVALFEELALKFSNLGLAELCKASIKYAEEGVVVSPRVAFDWRLN NLKFSQTTKKFYLVDGKVPETGSIFRAPKQAEVLRKIQKNGSKGFYQSEVTEDLVKSLQNLGGVHTLDDFANVTFEYVEP IFSNFQDGSKLFELPPNGQGITAIMIRKLMEICNIQEHSPYSANRVHLEAEIAKLAYTARNAFIGDPKFSQIKEHFFLDS AFLEKIAQQISLNKLIDGSGIQYFDEKPKDTVLISAADKDGNAISLIFSNFDSFGTGKCSEKYGLIFHNRGASFVLEKNH PNELEGNKRPLHTIIPAIFKGKNDMIMAFGVMGGDYQPYGHARILSNLFDYSMDPQSAINFPRSFFFNGVLKLEEGYDEN VAEALTSIGHKIVRPIAPIGGAQLVICDPSGVLIGASDPRKDGCALGI
Specific function: GGT PLAYS A KEY ROLE IN THE GAMMA-GLUTAMYL CYCLE, A PATHWAY FOR THE SYNTHESIS AND DEGRADATION OF GLUTATHIONE. [C]
COG id: COG0405
COG function: function code E; Gamma-glutamyltransferase
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gamma-glutamyltransferase family [H]
Homologues:
Organism=Homo sapiens, GI73915092, Length=539, Percent_Identity=25.2319109461967, Blast_Score=114, Evalue=2e-25, Organism=Homo sapiens, GI73915090, Length=539, Percent_Identity=25.2319109461967, Blast_Score=114, Evalue=2e-25, Organism=Homo sapiens, GI73915096, Length=539, Percent_Identity=25.2319109461967, Blast_Score=114, Evalue=2e-25, Organism=Homo sapiens, GI73915094, Length=539, Percent_Identity=25.2319109461967, Blast_Score=114, Evalue=2e-25, Organism=Homo sapiens, GI113429324, Length=548, Percent_Identity=25.3649635036496, Blast_Score=111, Evalue=2e-24, Organism=Homo sapiens, GI113429326, Length=553, Percent_Identity=24.7739602169982, Blast_Score=105, Evalue=7e-23, Organism=Homo sapiens, GI109148539, Length=539, Percent_Identity=22.4489795918367, Blast_Score=73, Evalue=5e-13, Organism=Escherichia coli, GI1789856, Length=531, Percent_Identity=26.9303201506591, Blast_Score=197, Evalue=2e-51, Organism=Caenorhabditis elegans, GI72000294, Length=446, Percent_Identity=24.4394618834081, Blast_Score=105, Evalue=4e-23, Organism=Caenorhabditis elegans, GI212646519, Length=446, Percent_Identity=24.4394618834081, Blast_Score=105, Evalue=6e-23, Organism=Caenorhabditis elegans, GI17506189, Length=485, Percent_Identity=23.7113402061856, Blast_Score=91, Evalue=1e-18, Organism=Caenorhabditis elegans, GI193208245, Length=509, Percent_Identity=22.3968565815324, Blast_Score=83, Evalue=4e-16, Organism=Caenorhabditis elegans, GI193208247, Length=509, Percent_Identity=22.3968565815324, Blast_Score=83, Evalue=5e-16, Organism=Drosophila melanogaster, GI161077878, Length=541, Percent_Identity=24.0295748613678, Blast_Score=119, Evalue=4e-27, Organism=Drosophila melanogaster, GI24642670, Length=541, Percent_Identity=24.0295748613678, Blast_Score=119, Evalue=4e-27, Organism=Drosophila melanogaster, GI24642666, Length=541, Percent_Identity=24.0295748613678, Blast_Score=119, Evalue=4e-27, Organism=Drosophila melanogaster, GI45551474, Length=541, Percent_Identity=24.0295748613678, Blast_Score=119, Evalue=5e-27, Organism=Drosophila melanogaster, GI161077880, Length=541, Percent_Identity=24.0295748613678, Blast_Score=119, Evalue=5e-27, Organism=Drosophila melanogaster, GI18859893, Length=501, Percent_Identity=23.1536926147705, Blast_Score=95, Evalue=1e-19, Organism=Drosophila melanogaster, GI161077496, Length=509, Percent_Identity=22.2003929273084, Blast_Score=82, Evalue=7e-16, Organism=Drosophila melanogaster, GI18859741, Length=509, Percent_Identity=20.8251473477407, Blast_Score=68, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000101 [H]
Pfam domain/function: PF01019 G_glu_transpept [H]
EC number: =2.3.2.2 [H]
Molecular weight: Translated: 57707; Mature: 57707
Theoretical pI: Translated: 6.99; Mature: 6.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRNFHKPERSEVFSQNGMIATSHPLAAKIGLDTMSHGGNAIDAAISAALMLTLCEPQSTG CCCCCCCHHHHHHHCCCEEEECCCCEEEECCHHHCCCCCHHHHHHHHHHHHHEECCCCCC LYGDAFVILKSQKSDKLIGINGSGNSPKAISSDLLLQKGLNKIPINSVHSITLPGAVALF CCCCEEEEEECCCCCCEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEECCHHHHHH EELALKFSNLGLAELCKASIKYAEEGVVVSPRVAFDWRLNNLKFSQTTKKFYLVDGKVPE HHHHHHHHCCCHHHHHHHHHHHHCCCEEECCCEEEEEEECCEEECCCCCEEEEEECCCCC TGSIFRAPKQAEVLRKIQKNGSKGFYQSEVTEDLVKSLQNLGGVHTLDDFANVTFEYVEP CCCHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH IFSNFQDGSKLFELPPNGQGITAIMIRKLMEICNIQEHSPYSANRVHLEAEIAKLAYTAR HHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHH NAFIGDPKFSQIKEHFFLDSAFLEKIAQQISLNKLIDGSGIQYFDEKPKDTVLISAADKD HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCC GNAISLIFSNFDSFGTGKCSEKYGLIFHNRGASFVLEKNHPNELEGNKRPLHTIIPAIFK CCEEEEEEECCCCCCCCCCCCCCCEEEECCCCEEEEECCCCCCCCCCCCCHHHHHHHHHC GKNDMIMAFGVMGGDYQPYGHARILSNLFDYSMDPQSAINFPRSFFFNGVLKLEEGYDEN CCCCEEEEEEECCCCCCCCCHHHHHHHHHCCCCCCHHHHCCCHHHHHCCEEEECCCCCHH VAEALTSIGHKIVRPIAPIGGAQLVICDPSGVLIGASDPRKDGCALGI HHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEECCCCCCCCCCCCC >Mature Secondary Structure MRNFHKPERSEVFSQNGMIATSHPLAAKIGLDTMSHGGNAIDAAISAALMLTLCEPQSTG CCCCCCCHHHHHHHCCCEEEECCCCEEEECCHHHCCCCCHHHHHHHHHHHHHEECCCCCC LYGDAFVILKSQKSDKLIGINGSGNSPKAISSDLLLQKGLNKIPINSVHSITLPGAVALF CCCCEEEEEECCCCCCEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEECCHHHHHH EELALKFSNLGLAELCKASIKYAEEGVVVSPRVAFDWRLNNLKFSQTTKKFYLVDGKVPE HHHHHHHHCCCHHHHHHHHHHHHCCCEEECCCEEEEEEECCEEECCCCCEEEEEECCCCC TGSIFRAPKQAEVLRKIQKNGSKGFYQSEVTEDLVKSLQNLGGVHTLDDFANVTFEYVEP CCCHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH IFSNFQDGSKLFELPPNGQGITAIMIRKLMEICNIQEHSPYSANRVHLEAEIAKLAYTAR HHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHH NAFIGDPKFSQIKEHFFLDSAFLEKIAQQISLNKLIDGSGIQYFDEKPKDTVLISAADKD HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCC GNAISLIFSNFDSFGTGKCSEKYGLIFHNRGASFVLEKNHPNELEGNKRPLHTIIPAIFK CCEEEEEEECCCCCCCCCCCCCCCEEEECCCCEEEEECCCCCCCCCCCCCHHHHHHHHHC GKNDMIMAFGVMGGDYQPYGHARILSNLFDYSMDPQSAINFPRSFFFNGVLKLEEGYDEN CCCCEEEEEEECCCCCCCCCHHHHHHHHHCCCCCCHHHHCCCHHHHHCCEEEECCCCCHH VAEALTSIGHKIVRPIAPIGGAQLVICDPSGVLIGASDPRKDGCALGI HHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9353933; 9384377 [H]