| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113476238
Identifier: 113476238
GI number: 113476238
Start: 4072395
End: 4074116
Strand: Reverse
Name: 113476238
Synonym: Tery_2631
Alternate gene names: NA
Gene position: 4074116-4072395 (Counterclockwise)
Preceding gene: 113476239
Following gene: 113476237
Centisome position: 52.57
GC content: 37.11
Gene sequence:
>1722_bases ATGAACCCAGCCAAAACTTTAACCACATTAACCCCAGTCAAACTCTGGTTTTATCTCAGCCTCACCCTAGCCATAACCTG TGGAATTTTAGGAATAATTCCCGCCCTTAGTCATCAATATATAGTCCAAGACGACGCCCGGTCCCACATCTTTTGGATGG CAAAATTTCTCAACCCCGAACTTTTTCCCAACGACATTATTGCCGACTATTTTCAATCAGTAGCCCCCCAAGGATATACC CACCTTTATAAACTATTTTCCCTCATCAAAATTCCACCCTTATTACTAAATAAAATCCTGCCAATAATATTAGGATTAAT CACAACCGCCTACTGTTTCAAAGTAGCAATACAAATATTACCCATCCCACTCGCAGGATTTCTCAGTACATTATTTTTAA ATCAAAATCTTTGGCTAAAAGACGACCTCATCTCCGGCACCCCCAGAGCATTTTTCTATCCCTTATTCCTAGGATTTCTC CATTACTTCCTCAAAAAATCCTCCCTAGGAATAATCATAACAATTACCCTTCTAGGATTATTTTATCCCCAAGGAGTTTT CCTCAGTGCCGCCCTCCTAACCTTAGACTTTCTCCACCTCCCAAACCAACAAAAACTCACCATATTAACCATAGGTTTAA CCACAGCATTCCTCATACTTTTACCCTACGCTTTAAACACCTCCGAATATAGCCCAATCATTACATTAACCCAAGCCAAA AAACTACCAGAATTTTTCCCCGGTGGTAGAGCATCCTTCTTTTCAAACAACAACTTTGACTTTTGGTTAACAGGCGATCG CTCCGGCATTATTCCTCCAGAATGGCTATCCCAATCTTTTCTTCCCCCCCAAGTTTGGGCAGGATTATTATTATTCATTT TCTTAAGCTTCAACAAAAAAAATATAACCCAAAAAATCACCAACAAAATAATCCTTTTACCAGAATTAGCCTTAGCATCA ACCGGAATATTTATAGCCGCCCACCTATTATTATTTCGACTACATCATCCCAGTCGTTACAGTCAACATAGCCTCAGAAT AATCATGGCTTTAGCAGGAGGAATAGCCTTCACATTAATCATAGAATTAATCAGAAAAAAGCTCCATCTCCTCAACAATT CATCCAAAAACCAACCACTCCAAAAAATAAGAGCTATCTCCATATCTACATCTATATATATAGTATTAACCTTAATTATT ATATATCCAGCCCTAACCAACAACTTTCCCGTAACCAATTATGTAGTCGGAAAAGCACCCCAACTTTATGAATATTTAGC CCAACAACCCTCAGATATTCGCATCGCCTCCTTAGCATTAGAAGCTAATAATATTCCCACATTTGCCAAACGTTCAATAT TAGTAAGTTCCGAATATGCTTTACCTTATCACCAAGGATATTATAATCAAATCAAACAACGAGCCAAAGATTTAATCCAA GCCCAATATAGTCCGAACCTAGAAGAAGTCAAAAAAATTATCCACAAATATAAAATTGACTTTTGGTTATTAGATTCTCA AGCATTAACCTTAGAATATGTCAGAAAAAACCATCGTCTTCAACAATTAAATTATACCGCCGCCAACCTAGTTAAAAGTC AGATGGAAAATGGCATAACTCCCACCTTATTAAATGTGCCAGAAAAATGTCGAGTTCTAGATATTCATAACTTAGTTTTA CTAGAAGCAAAATGTATTTTAGGAGTAACTTCTAGTAATTAA
Upstream 100 bases:
>100_bases CAGTCTTAATATCCAACCTAAAAGATCATGTAAAACCATAACTACTCAAAAAACAGCCCCAACCCCATACCTCCAGCCGC CCACCTCCCCATTTACCAAA
Downstream 100 bases:
>100_bases CTTATCAAGGAAGCTCAGTCAGGAGAGGAAGCGAGAAAAAATAATTTTGCAGATCAATTACTGCCTTTAGCTAATAGCTG AAGATTCAAAATTTACAGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 573; Mature: 573
Protein sequence:
>573_residues MNPAKTLTTLTPVKLWFYLSLTLAITCGILGIIPALSHQYIVQDDARSHIFWMAKFLNPELFPNDIIADYFQSVAPQGYT HLYKLFSLIKIPPLLLNKILPIILGLITTAYCFKVAIQILPIPLAGFLSTLFLNQNLWLKDDLISGTPRAFFYPLFLGFL HYFLKKSSLGIIITITLLGLFYPQGVFLSAALLTLDFLHLPNQQKLTILTIGLTTAFLILLPYALNTSEYSPIITLTQAK KLPEFFPGGRASFFSNNNFDFWLTGDRSGIIPPEWLSQSFLPPQVWAGLLLFIFLSFNKKNITQKITNKIILLPELALAS TGIFIAAHLLLFRLHHPSRYSQHSLRIIMALAGGIAFTLIIELIRKKLHLLNNSSKNQPLQKIRAISISTSIYIVLTLII IYPALTNNFPVTNYVVGKAPQLYEYLAQQPSDIRIASLALEANNIPTFAKRSILVSSEYALPYHQGYYNQIKQRAKDLIQ AQYSPNLEEVKKIIHKYKIDFWLLDSQALTLEYVRKNHRLQQLNYTAANLVKSQMENGITPTLLNVPEKCRVLDIHNLVL LEAKCILGVTSSN
Sequences:
>Translated_573_residues MNPAKTLTTLTPVKLWFYLSLTLAITCGILGIIPALSHQYIVQDDARSHIFWMAKFLNPELFPNDIIADYFQSVAPQGYT HLYKLFSLIKIPPLLLNKILPIILGLITTAYCFKVAIQILPIPLAGFLSTLFLNQNLWLKDDLISGTPRAFFYPLFLGFL HYFLKKSSLGIIITITLLGLFYPQGVFLSAALLTLDFLHLPNQQKLTILTIGLTTAFLILLPYALNTSEYSPIITLTQAK KLPEFFPGGRASFFSNNNFDFWLTGDRSGIIPPEWLSQSFLPPQVWAGLLLFIFLSFNKKNITQKITNKIILLPELALAS TGIFIAAHLLLFRLHHPSRYSQHSLRIIMALAGGIAFTLIIELIRKKLHLLNNSSKNQPLQKIRAISISTSIYIVLTLII IYPALTNNFPVTNYVVGKAPQLYEYLAQQPSDIRIASLALEANNIPTFAKRSILVSSEYALPYHQGYYNQIKQRAKDLIQ AQYSPNLEEVKKIIHKYKIDFWLLDSQALTLEYVRKNHRLQQLNYTAANLVKSQMENGITPTLLNVPEKCRVLDIHNLVL LEAKCILGVTSSN >Mature_573_residues MNPAKTLTTLTPVKLWFYLSLTLAITCGILGIIPALSHQYIVQDDARSHIFWMAKFLNPELFPNDIIADYFQSVAPQGYT HLYKLFSLIKIPPLLLNKILPIILGLITTAYCFKVAIQILPIPLAGFLSTLFLNQNLWLKDDLISGTPRAFFYPLFLGFL HYFLKKSSLGIIITITLLGLFYPQGVFLSAALLTLDFLHLPNQQKLTILTIGLTTAFLILLPYALNTSEYSPIITLTQAK KLPEFFPGGRASFFSNNNFDFWLTGDRSGIIPPEWLSQSFLPPQVWAGLLLFIFLSFNKKNITQKITNKIILLPELALAS TGIFIAAHLLLFRLHHPSRYSQHSLRIIMALAGGIAFTLIIELIRKKLHLLNNSSKNQPLQKIRAISISTSIYIVLTLII IYPALTNNFPVTNYVVGKAPQLYEYLAQQPSDIRIASLALEANNIPTFAKRSILVSSEYALPYHQGYYNQIKQRAKDLIQ AQYSPNLEEVKKIIHKYKIDFWLLDSQALTLEYVRKNHRLQQLNYTAANLVKSQMENGITPTLLNVPEKCRVLDIHNLVL LEAKCILGVTSSN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 64814; Mature: 64814
Theoretical pI: Translated: 9.94; Mature: 9.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPAKTLTTLTPVKLWFYLSLTLAITCGILGIIPALSHQYIVQDDARSHIFWMAKFLNPE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHCCCC LFPNDIIADYFQSVAPQGYTHLYKLFSLIKIPPLLLNKILPIILGLITTAYCFKVAIQIL CCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH PIPLAGFLSTLFLNQNLWLKDDLISGTPRAFFYPLFLGFLHYFLKKSSLGIIITITLLGL CCCHHHHHHHHHHCCCCCEECHHCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHH FYPQGVFLSAALLTLDFLHLPNQQKLTILTIGLTTAFLILLPYALNTSEYSPIITLTQAK HCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHHCCCCCCCCEEEEHHHH KLPEFFPGGRASFFSNNNFDFWLTGDRSGIIPPEWLSQSFLPPQVWAGLLLFIFLSFNKK CCCCCCCCCCEECCCCCCEEEEEECCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHCCCH NITQKITNKIILLPELALASTGIFIAAHLLLFRLHHPSRYSQHSLRIIMALAGGIAFTLI HHHHHHHCCEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH IELIRKKLHLLNNSSKNQPLQKIRAISISTSIYIVLTLIIIYPALTNNFPVTNYVVGKAP HHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCEEECCCH QLYEYLAQQPSDIRIASLALEANNIPTFAKRSILVSSEYALPYHQGYYNQIKQRAKDLIQ HHHHHHHCCCCCCEEEEEEEECCCCCCHHHCEEEEECCCCCCHHCCHHHHHHHHHHHHHH AQYSPNLEEVKKIIHKYKIDFWLLDSQALTLEYVRKNHRLQQLNYTAANLVKSQMENGIT HHCCCCHHHHHHHHHHHCCEEEEECCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCC PTLLNVPEKCRVLDIHNLVLLEAKCILGVTSSN CCCCCCCCCCEEEEECCCCEEEEEEEEEEECCC >Mature Secondary Structure MNPAKTLTTLTPVKLWFYLSLTLAITCGILGIIPALSHQYIVQDDARSHIFWMAKFLNPE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHCCCC LFPNDIIADYFQSVAPQGYTHLYKLFSLIKIPPLLLNKILPIILGLITTAYCFKVAIQIL CCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH PIPLAGFLSTLFLNQNLWLKDDLISGTPRAFFYPLFLGFLHYFLKKSSLGIIITITLLGL CCCHHHHHHHHHHCCCCCEECHHCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHH FYPQGVFLSAALLTLDFLHLPNQQKLTILTIGLTTAFLILLPYALNTSEYSPIITLTQAK HCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHHCCCCCCCCEEEEHHHH KLPEFFPGGRASFFSNNNFDFWLTGDRSGIIPPEWLSQSFLPPQVWAGLLLFIFLSFNKK CCCCCCCCCCEECCCCCCEEEEEECCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHCCCH NITQKITNKIILLPELALASTGIFIAAHLLLFRLHHPSRYSQHSLRIIMALAGGIAFTLI HHHHHHHCCEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH IELIRKKLHLLNNSSKNQPLQKIRAISISTSIYIVLTLIIIYPALTNNFPVTNYVVGKAP HHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCEEECCCH QLYEYLAQQPSDIRIASLALEANNIPTFAKRSILVSSEYALPYHQGYYNQIKQRAKDLIQ HHHHHHHCCCCCCEEEEEEEECCCCCCHHHCEEEEECCCCCCHHCCHHHHHHHHHHHHHH AQYSPNLEEVKKIIHKYKIDFWLLDSQALTLEYVRKNHRLQQLNYTAANLVKSQMENGIT HHCCCCHHHHHHHHHHHCCEEEEECCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCC PTLLNVPEKCRVLDIHNLVLLEAKCILGVTSSN CCCCCCCCCCEEEEECCCCEEEEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA