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The map label for this gene is degT [H]

Identifier: 113476129

GI number: 113476129

Start: 3876821

End: 3878002

Strand: Direct

Name: degT [H]

Synonym: Tery_2511

Alternate gene names: 113476129

Gene position: 3876821-3878002 (Clockwise)

Preceding gene: 113476127

Following gene: 113476130

Centisome position: 50.02

GC content: 35.96

Gene sequence:

>1182_bases
ATGGCTAATGTTCCCCCCCTAGATTTAACACAACAGTATGAAATAATCAAAGAACAAGTAAATACTAGAGTTCAAGAGGT
ACTTAGCTCTGGTCGTTATATTGGCGGTTCTATTGTTGATGAGTTTGAACAAGAATTTGCTAAATACATAGATGTATCTC
ATTGTGTATCCTGTAACTCTGGCACTGATGCTCTGTTTCTAGCTTTACGAGCTATGAATATTGGGCTTGGGGATGAAGTA
ATTACTACTCCTTTCACTTTTTTTGCTACTGCTGAAGTCATTAGTGCAGTAGGAGCAACTCCAATTTTTATTGACATTGA
CCCCCAGACTTTTAACTTAGATCTTCAAAAACTTGAGCTAGCGATAACTGAAAAAACAAAAGCTATTTTGCCAGTACATT
TATTTGGTCAACCTTTAGATATGACACAGTTAATGGCGATCGCTCGTGCCCACAATTTAATAGTTATTGAAGACTGTGCC
CAAGCTACAGGAGCAGAATGGCACCAGAAAAAAGTCGGGAGTTTTGGTGATGTTGGTTGTTTTAGTTTTTTTCCTACTAA
AAATTTAGGAGCTTTTGGAGATGGGGGAGCTCTGACCACAAATAATGCAGCGATCGCTTCTCAAGCGCGAATACTAAAAA
ATCATGGACAGTCTGCCAAATATTTTTCTCAAGACATTGGTATTAACAGTCGTCTAGATACCATACAAGCTGCAATTCTG
CAAATAAAATTACCATTATTAGATAGTTGGAACGAACAACGTCGTAAATTAGCAAATCATTACCATAAATTTTTTAGTAC
TATAACTGCTGTAGTTCCTCCTCAAGAGTTATCTGGAAGTAGATGTGTTTGGAATCAATACACAATTATGCTTAAAAGTA
AACAGTTAGAAACTACGACAAAATCTCATTTTTCTAATTATTTGCGTGATTTAGTTCATGATAATTTACAAAATAGGGGA
ATAGGTTCAGCGGTTTACTATCCTACACCTTTACATTTACAACCTGTTTACAAATCTTTGGTAAACTATCAATTGCCAGT
AGTAGAACAAGTGTGCCATCAGGTTTTGTCCTTGCCTATTTTTCCTGAACTTTCCACTCCACAACAAGAGCAAGTTATAT
ATGCTTTGAAAGATTGTTTGCAAGAACTAATGCCGAATCCACCAAGAAGTCATAAATTATAA

Upstream 100 bases:

>100_bases
AAAATTATCTTTCCCCGTTACTACTTTATTTAAAACTTAGATTATTGATAATTTCGCCAATTATTACTATAATTTAATAC
TATAATTCATTACTTTTGAT

Downstream 100 bases:

>100_bases
GTTGTTTTTATTATGTGTATATTGAGCAACTTTTGTGATCATAGTTTTAAATTTAATATTTACTTGAGTACCATTACAAA
ATTATTTTACTTTAAAAATT

Product: DegT/DnrJ/EryC1/StrS aminotransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 393; Mature: 392

Protein sequence:

>393_residues
MANVPPLDLTQQYEIIKEQVNTRVQEVLSSGRYIGGSIVDEFEQEFAKYIDVSHCVSCNSGTDALFLALRAMNIGLGDEV
ITTPFTFFATAEVISAVGATPIFIDIDPQTFNLDLQKLELAITEKTKAILPVHLFGQPLDMTQLMAIARAHNLIVIEDCA
QATGAEWHQKKVGSFGDVGCFSFFPTKNLGAFGDGGALTTNNAAIASQARILKNHGQSAKYFSQDIGINSRLDTIQAAIL
QIKLPLLDSWNEQRRKLANHYHKFFSTITAVVPPQELSGSRCVWNQYTIMLKSKQLETTTKSHFSNYLRDLVHDNLQNRG
IGSAVYYPTPLHLQPVYKSLVNYQLPVVEQVCHQVLSLPIFPELSTPQQEQVIYALKDCLQELMPNPPRSHKL

Sequences:

>Translated_393_residues
MANVPPLDLTQQYEIIKEQVNTRVQEVLSSGRYIGGSIVDEFEQEFAKYIDVSHCVSCNSGTDALFLALRAMNIGLGDEV
ITTPFTFFATAEVISAVGATPIFIDIDPQTFNLDLQKLELAITEKTKAILPVHLFGQPLDMTQLMAIARAHNLIVIEDCA
QATGAEWHQKKVGSFGDVGCFSFFPTKNLGAFGDGGALTTNNAAIASQARILKNHGQSAKYFSQDIGINSRLDTIQAAIL
QIKLPLLDSWNEQRRKLANHYHKFFSTITAVVPPQELSGSRCVWNQYTIMLKSKQLETTTKSHFSNYLRDLVHDNLQNRG
IGSAVYYPTPLHLQPVYKSLVNYQLPVVEQVCHQVLSLPIFPELSTPQQEQVIYALKDCLQELMPNPPRSHKL
>Mature_392_residues
ANVPPLDLTQQYEIIKEQVNTRVQEVLSSGRYIGGSIVDEFEQEFAKYIDVSHCVSCNSGTDALFLALRAMNIGLGDEVI
TTPFTFFATAEVISAVGATPIFIDIDPQTFNLDLQKLELAITEKTKAILPVHLFGQPLDMTQLMAIARAHNLIVIEDCAQ
ATGAEWHQKKVGSFGDVGCFSFFPTKNLGAFGDGGALTTNNAAIASQARILKNHGQSAKYFSQDIGINSRLDTIQAAILQ
IKLPLLDSWNEQRRKLANHYHKFFSTITAVVPPQELSGSRCVWNQYTIMLKSKQLETTTKSHFSNYLRDLVHDNLQNRGI
GSAVYYPTPLHLQPVYKSLVNYQLPVVEQVCHQVLSLPIFPELSTPQQEQVIYALKDCLQELMPNPPRSHKL

Specific function: This membrane protein may function as a sensor protein and may transfer the signal of environmental stimuli to the regulatory region of target genes to activate or repress transcription of the genes [H]

COG id: COG0399

COG function: function code M; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the degT/dnrJ/eryC1 family [H]

Homologues:

Organism=Escherichia coli, GI145693159, Length=371, Percent_Identity=31.5363881401617, Blast_Score=169, Evalue=2e-43,
Organism=Escherichia coli, GI2367285, Length=368, Percent_Identity=30.7065217391304, Blast_Score=164, Evalue=7e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000653
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF01041 DegT_DnrJ_EryC1 [H]

EC number: NA

Molecular weight: Translated: 43778; Mature: 43646

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANVPPLDLTQQYEIIKEQVNTRVQEVLSSGRYIGGSIVDEFEQEFAKYIDVSHCVSCNS
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCHHHHCCCCC
GTDALFLALRAMNIGLGDEVITTPFTFFATAEVISAVGATPIFIDIDPQTFNLDLQKLEL
CCHHHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHHHHCCCEEEEEECCCEECCCHHHHHH
AITEKTKAILPVHLFGQPLDMTQLMAIARAHNLIVIEDCAQATGAEWHQKKVGSFGDVGC
HHHHCCCEEEEEHCCCCCCCHHHHHHHHHHCCEEEEECHHHHCCCHHHHHHCCCCCCCCC
FSFFPTKNLGAFGDGGALTTNNAAIASQARILKNHGQSAKYFSQDIGINSRLDTIQAAIL
EEECCCCCCCCCCCCCCEECCCHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHH
QIKLPLLDSWNEQRRKLANHYHKFFSTITAVVPPQELSGSRCVWNQYTIMLKSKQLETTT
HHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCEEEEEEEEEEEECCHHHHHH
KSHFSNYLRDLVHDNLQNRGIGSAVYYPTPLHLQPVYKSLVNYQLPVVEQVCHQVLSLPI
HHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCC
FPELSTPQQEQVIYALKDCLQELMPNPPRSHKL
CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
ANVPPLDLTQQYEIIKEQVNTRVQEVLSSGRYIGGSIVDEFEQEFAKYIDVSHCVSCNS
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCHHHHCCCCC
GTDALFLALRAMNIGLGDEVITTPFTFFATAEVISAVGATPIFIDIDPQTFNLDLQKLEL
CCHHHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHHHHCCCEEEEEECCCEECCCHHHHHH
AITEKTKAILPVHLFGQPLDMTQLMAIARAHNLIVIEDCAQATGAEWHQKKVGSFGDVGC
HHHHCCCEEEEEHCCCCCCCHHHHHHHHHHCCEEEEECHHHHCCCHHHHHHCCCCCCCCC
FSFFPTKNLGAFGDGGALTTNNAAIASQARILKNHGQSAKYFSQDIGINSRLDTIQAAIL
EEECCCCCCCCCCCCCCEECCCHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHH
QIKLPLLDSWNEQRRKLANHYHKFFSTITAVVPPQELSGSRCVWNQYTIMLKSKQLETTT
HHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCEEEEEEEEEEEECCHHHHHH
KSHFSNYLRDLVHDNLQNRGIGSAVYYPTPLHLQPVYKSLVNYQLPVVEQVCHQVLSLPI
HHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCC
FPELSTPQQEQVIYALKDCLQELMPNPPRSHKL
CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2104607 [H]