| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113476059
Identifier: 113476059
GI number: 113476059
Start: 3747165
End: 3747437
Strand: Direct
Name: 113476059
Synonym: Tery_2431
Alternate gene names: NA
Gene position: 3747165-3747437 (Clockwise)
Preceding gene: 113476058
Following gene: 113476063
Centisome position: 48.35
GC content: 38.83
Gene sequence:
>273_bases ATGAACTTACCCAGCCCAGATACTCCCTTATATAACCATCCTCTACCAAAAATTGAGGAATGGCTTCAAGAAAATGGTTG TCAACAAAATCCTGAAAAACTTCACTGTTGGTGGGTTGAAAAACCTAACTGGCAAGCAGAATTATTACTTGATATCGATC AACTGACTATACGTTATGTAAATGCAGGTGTTGATGGTAGTGATATTCAACGCTCTTTTACATATTCCTTAAGTCGCCGG GATATTGAAGAAGCTATTTTTTCCGGCCCCTAG
Upstream 100 bases:
>100_bases TTTATAGTATAAGATTTTGCTCTAGTGAAAATAAATAAGTAGACCCTGCCTGAAAATGAGAGGCATTTAACCTAATTTTT CCTTGTAAGAACACAAATAA
Downstream 100 bases:
>100_bases TTGGACTAGAGTTAATTAAATTTTACCAAATCTACGTTCACGCTTCTGATAAGCACACAAAGCCCGATGAAATTCATAAC GATTAAAGTCAGGCCAAAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 90; Mature: 90
Protein sequence:
>90_residues MNLPSPDTPLYNHPLPKIEEWLQENGCQQNPEKLHCWWVEKPNWQAELLLDIDQLTIRYVNAGVDGSDIQRSFTYSLSRR DIEEAIFSGP
Sequences:
>Translated_90_residues MNLPSPDTPLYNHPLPKIEEWLQENGCQQNPEKLHCWWVEKPNWQAELLLDIDQLTIRYVNAGVDGSDIQRSFTYSLSRR DIEEAIFSGP >Mature_90_residues MNLPSPDTPLYNHPLPKIEEWLQENGCQQNPEKLHCWWVEKPNWQAELLLDIDQLTIRYVNAGVDGSDIQRSFTYSLSRR DIEEAIFSGP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10497; Mature: 10497
Theoretical pI: Translated: 4.29; Mature: 4.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLPSPDTPLYNHPLPKIEEWLQENGCQQNPEKLHCWWVEKPNWQAELLLDIDQLTIRYV CCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEEECCCCCCCEEEEEEHHHHEEEHH NAGVDGSDIQRSFTYSLSRRDIEEAIFSGP CCCCCHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MNLPSPDTPLYNHPLPKIEEWLQENGCQQNPEKLHCWWVEKPNWQAELLLDIDQLTIRYV CCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEEECCCCCCCEEEEEEHHHHEEEHH NAGVDGSDIQRSFTYSLSRRDIEEAIFSGP CCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA