| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113476057
Identifier: 113476057
GI number: 113476057
Start: 3745829
End: 3745996
Strand: Direct
Name: 113476057
Synonym: Tery_2428
Alternate gene names: NA
Gene position: 3745829-3745996 (Clockwise)
Preceding gene: 113476056
Following gene: 113476058
Centisome position: 48.33
GC content: 33.93
Gene sequence:
>168_bases ATGAACACCAAGAAAAAAGTGGGCTACAAACAAAACTTATCTATGCTGAAGAACTGGAAAAAGCAGGAATATTTAGATTT TTTGACTAAAGTAATTATTATACCACTCCAGCAAGGCTTAAGACATTTACAAGCTACTTTCACCAACTTTTTTTGGGGGA CAGACTAA
Upstream 100 bases:
>100_bases AAAGCGTACACAAATTTAGATTTTATCCAACTCCTCAGCACTGTTAGTATGCTTTGTTACATCTACAACAAAGCCTTAGC TTCCAGGACTTAAATTTGGT
Downstream 100 bases:
>100_bases ATATCCTAATTTCAAGAAAAAGCCTAATGGTCGAAGTTCTGGTTTGCGAAGGCAGCATTCAAGTGTAAAGATACTCAAGT ATATCTAGCTAAATGTGCAG
Product: transposase, IS891/IS1136/IS1341
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 55; Mature: 55
Protein sequence:
>55_residues MNTKKKVGYKQNLSMLKNWKKQEYLDFLTKVIIIPLQQGLRHLQATFTNFFWGTD
Sequences:
>Translated_55_residues MNTKKKVGYKQNLSMLKNWKKQEYLDFLTKVIIIPLQQGLRHLQATFTNFFWGTD >Mature_55_residues MNTKKKVGYKQNLSMLKNWKKQEYLDFLTKVIIIPLQQGLRHLQATFTNFFWGTD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6605; Mature: 6605
Theoretical pI: Translated: 10.67; Mature: 10.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTKKKVGYKQNLSMLKNWKKQEYLDFLTKVIIIPLQQGLRHLQATFTNFFWGTD CCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MNTKKKVGYKQNLSMLKNWKKQEYLDFLTKVIIIPLQQGLRHLQATFTNFFWGTD CCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA