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The map label for this gene is hsdS [C]

Identifier: 113476050

GI number: 113476050

Start: 3735023

End: 3736231

Strand: Direct

Name: hsdS [C]

Synonym: Tery_2421

Alternate gene names: 113476050

Gene position: 3735023-3736231 (Clockwise)

Preceding gene: 113476049

Following gene: 113476051

Centisome position: 48.19

GC content: 38.13

Gene sequence:

>1209_bases
ATGAAATGGCAGCGTGTTTTTGTTGAAGATGTAGCTAAAATTGTAACTAAGGGAACTACTCCTACTTCTATAGGTTTTAG
CTTTTCTAAAGAAGGTATCCCTTTTCTACGAGTCAATAATATCCAAGATGGTAAAATCAATCTTGGTGATGTTTTATTTA
TTGACTCAAAAACGGATCAAGCTCTTGCGCGTTCTCGAATTTTAAAAAAAGATGTAATAATTTCAATTGCTGGTACAATT
GGAAAAACCGCAGTTATTCCTACTAATGCTCCAGCAATGAACTGCAACCAGGCACTTGCAATAATAAGGCTTCACAATAA
TGTAGACCCCTACTATTTTAACCATTGGCTGAATACAGGAGATGCGTTTCGACAAATTACAGGTTCAAAAGTGACAGCAA
CTATTTCTAACCTAAGTCTTGGTTGTATCAAAAAGCTCAAAATCCCCCTCCCCCCAATAGAAGAACAGCGCCGAATAGCT
GCAATACTCGACCAAGCTGATGCTATCAGACGAAAGAGACAACAAGCGATCGCTCTAACAGATGAATTATTGCGTTCTAC
ATTCCTGGAGATGTTCGGCGACCCTGTTATTAATCCGAAGGGGTGGGAGGTAAAAAAATTAGAGGAAGTTGCATTAAAAC
GCAAGGGGGCTATAAAATGCGGACCTTTTGGTAGCCAACTACTTATAAGCGAGTTTGTCAAAGATGGTATTCCAGTATAC
GGAATAGACAATGTTCAAAAAAATGAGTTTGTTTGGGCCAAACCCAAGTATATTACTACTGAAAAGTACGAGCAATTAAA
AAGCTTTTCTATCCAGGATGAGGACGTTCTGATTTCAAGAACTGGAACAGTTGGAAGAACTTGTGTCGCACCACCTGATA
TCCCTAGAAGTATCCTTGGACCTAACTTGCTGAAAGTTTCCTTAAATACTAACAAAATGCTTCCTAAATATTTGTCCTAT
GCTTTAAATCACTCTAATCCCCTGATTGAAGAGATAAAAAGAATGTCACCAGGTGCTACAGTTGCAGTTTTTAACACAAC
AAACCTTAAAGCTTTGAGGTTAACAATTCCCCATATAAACCTGCAATCCCAGTTTGTCAACTTTACTGAAAATGTTGAAT
TGACAAAGCAAAAAGAGTCTAACTACCTCACAGAATCCAACAACCTATTTAACTCCCTGTTACAACGCGCATTCAAAGGC
CAACTATAA

Upstream 100 bases:

>100_bases
TTTTGTTTTGAAAAATGTTTGTAATTTTGAGGTGGATAAGTAGGATGGGGAAGGAGTTAGGAATTGAGTTTTTTTTTGTT
GAGTTGAAGGGATTAATTGG

Downstream 100 bases:

>100_bases
TAAAAGGAAAAAACCCATGACCTCAAACTTTGACTTTCTCAAACCCCACTACCCCAAACTACACCAAACCGCCACCCAGG
CAGAAACATTAATCAACAAC

Product: restriction modification system DNA specificity subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 402; Mature: 402

Protein sequence:

>402_residues
MKWQRVFVEDVAKIVTKGTTPTSIGFSFSKEGIPFLRVNNIQDGKINLGDVLFIDSKTDQALARSRILKKDVIISIAGTI
GKTAVIPTNAPAMNCNQALAIIRLHNNVDPYYFNHWLNTGDAFRQITGSKVTATISNLSLGCIKKLKIPLPPIEEQRRIA
AILDQADAIRRKRQQAIALTDELLRSTFLEMFGDPVINPKGWEVKKLEEVALKRKGAIKCGPFGSQLLISEFVKDGIPVY
GIDNVQKNEFVWAKPKYITTEKYEQLKSFSIQDEDVLISRTGTVGRTCVAPPDIPRSILGPNLLKVSLNTNKMLPKYLSY
ALNHSNPLIEEIKRMSPGATVAVFNTTNLKALRLTIPHINLQSQFVNFTENVELTKQKESNYLTESNNLFNSLLQRAFKG
QL

Sequences:

>Translated_402_residues
MKWQRVFVEDVAKIVTKGTTPTSIGFSFSKEGIPFLRVNNIQDGKINLGDVLFIDSKTDQALARSRILKKDVIISIAGTI
GKTAVIPTNAPAMNCNQALAIIRLHNNVDPYYFNHWLNTGDAFRQITGSKVTATISNLSLGCIKKLKIPLPPIEEQRRIA
AILDQADAIRRKRQQAIALTDELLRSTFLEMFGDPVINPKGWEVKKLEEVALKRKGAIKCGPFGSQLLISEFVKDGIPVY
GIDNVQKNEFVWAKPKYITTEKYEQLKSFSIQDEDVLISRTGTVGRTCVAPPDIPRSILGPNLLKVSLNTNKMLPKYLSY
ALNHSNPLIEEIKRMSPGATVAVFNTTNLKALRLTIPHINLQSQFVNFTENVELTKQKESNYLTESNNLFNSLLQRAFKG
QL
>Mature_402_residues
MKWQRVFVEDVAKIVTKGTTPTSIGFSFSKEGIPFLRVNNIQDGKINLGDVLFIDSKTDQALARSRILKKDVIISIAGTI
GKTAVIPTNAPAMNCNQALAIIRLHNNVDPYYFNHWLNTGDAFRQITGSKVTATISNLSLGCIKKLKIPLPPIEEQRRIA
AILDQADAIRRKRQQAIALTDELLRSTFLEMFGDPVINPKGWEVKKLEEVALKRKGAIKCGPFGSQLLISEFVKDGIPVY
GIDNVQKNEFVWAKPKYITTEKYEQLKSFSIQDEDVLISRTGTVGRTCVAPPDIPRSILGPNLLKVSLNTNKMLPKYLSY
ALNHSNPLIEEIKRMSPGATVAVFNTTNLKALRLTIPHINLQSQFVNFTENVELTKQKESNYLTESNNLFNSLLQRAFKG
QL

Specific function: The M And S Subunits Together Form A Methyltransferase (Mtase) That Methylates Two Adenine Residues In Complementary Strands Of A Bipartite DNA Recognition Sequence. In The Presence Of The R Subunit The Complex Can Also Act As An Endonuclease, Binding To

COG id: COG0732

COG function: function code V; Restriction endonuclease S subunits

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To M.jannaschii MJ0130 and MJ1218 [H]

Homologues:

Organism=Escherichia coli, GI1790807, Length=411, Percent_Identity=21.8978102189781, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000055 [H]

Pfam domain/function: PF01420 Methylase_S [H]

EC number: NA

Molecular weight: Translated: 44968; Mature: 44968

Theoretical pI: Translated: 10.18; Mature: 10.18

Prosite motif: PS00189 LIPOYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKWQRVFVEDVAKIVTKGTTPTSIGFSFSKEGIPFLRVNNIQDGKINLGDVLFIDSKTDQ
CCCHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCEEEECCCCCCCCCCCEEEEEECCCHH
ALARSRILKKDVIISIAGTIGKTAVIPTNAPAMNCNQALAIIRLHNNVDPYYFNHWLNTG
HHHHHHHHHHHHEEEEECCCCCEEEECCCCCCCCCCCEEEEEEEECCCCCEEHHHHCCCC
DAFRQITGSKVTATISNLSLGCIKKLKIPLPPIEEQRRIAAILDQADAIRRKRQQAIALT
HHHHHHCCCEEEEEECCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
DELLRSTFLEMFGDPVINPKGWEVKKLEEVALKRKGAIKCGPFGSQLLISEFVKDGIPVY
HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHCCCCEE
GIDNVQKNEFVWAKPKYITTEKYEQLKSFSIQDEDVLISRTGTVGRTCVAPPDIPRSILG
ECCCCCCCCEEEECCCEECHHHHHHHHHCCCCCCCEEEEECCCCCCEECCCCCCCHHHCC
PNLLKVSLNTNKMLPKYLSYALNHSNPLIEEIKRMSPGATVAVFNTTNLKALRLTIPHIN
CCEEEEEECCCCCCHHHHHHHHCCCCHHHHHHHHCCCCCEEEEEECCCEEEEEEEECCCC
LQSQFVNFTENVELTKQKESNYLTESNNLFNSLLQRAFKGQL
HHHHHHCCCCCCEEEEHHCCCCCCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKWQRVFVEDVAKIVTKGTTPTSIGFSFSKEGIPFLRVNNIQDGKINLGDVLFIDSKTDQ
CCCHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCEEEECCCCCCCCCCCEEEEEECCCHH
ALARSRILKKDVIISIAGTIGKTAVIPTNAPAMNCNQALAIIRLHNNVDPYYFNHWLNTG
HHHHHHHHHHHHEEEEECCCCCEEEECCCCCCCCCCCEEEEEEEECCCCCEEHHHHCCCC
DAFRQITGSKVTATISNLSLGCIKKLKIPLPPIEEQRRIAAILDQADAIRRKRQQAIALT
HHHHHHCCCEEEEEECCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
DELLRSTFLEMFGDPVINPKGWEVKKLEEVALKRKGAIKCGPFGSQLLISEFVKDGIPVY
HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHCCCCEE
GIDNVQKNEFVWAKPKYITTEKYEQLKSFSIQDEDVLISRTGTVGRTCVAPPDIPRSILG
ECCCCCCCCEEEECCCEECHHHHHHHHHCCCCCCCEEEEECCCCCCEECCCCCCCHHHCC
PNLLKVSLNTNKMLPKYLSYALNHSNPLIEEIKRMSPGATVAVFNTTNLKALRLTIPHIN
CCEEEEEECCCCCCHHHHHHHHCCCCHHHHHHHHCCCCCEEEEEECCCEEEEEEEECCCC
LQSQFVNFTENVELTKQKESNYLTESNNLFNSLLQRAFKGQL
HHHHHHCCCCCCEEEEHHCCCCCCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: Hydrolase; Acting on ester bonds [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]