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The map label for this gene is gvpJ [H]

Identifier: 113475964

GI number: 113475964

Start: 3605134

End: 3605445

Strand: Direct

Name: gvpJ [H]

Synonym: Tery_2330

Alternate gene names: 113475964

Gene position: 3605134-3605445 (Clockwise)

Preceding gene: 113475963

Following gene: 113475965

Centisome position: 46.52

GC content: 39.1

Gene sequence:

>312_bases
ATGAAGACAAGCGCTAATATAGCTACATCAGCCAGTGGAAATGGTCTAGCAGATGTACTGGAAAGAGTGCTGGATAAAGG
AGTTGTAATTGCTGGAGATATTTCTGTTTCTATTGCTAGTACAGAACTTCTGAATATTAAAATCCGCCTGTTAATATCCT
CGGTGGAGAGAGCTAAAGAAATTGGAATTAACTGGTGGGAAAGCGATCCCTATTTCAGTAGTCAAAACAATTCTTTGGTG
CAGGCCAATGAAAAACTTCTTGAGCGAGTTGCTTCTCTCGAATCAGAGATAAAAGCACTTCGTAGTAATTAA

Upstream 100 bases:

>100_bases
GGCAGGAAGCTCTGCAGCAACTAGATGAAGTTCTAGAGGAATTTTTCCCCGCTGATCAACCTTCAAGTTCTGATGTTGGG
CTCGAAAAAGAGGGTAGTTT

Downstream 100 bases:

>100_bases
TATTACTCCCTCCCCGGTCGCAAGATTATAATAAGTGTATGATAGTAGCATACACTTAAAATCTAGTTTAGCTAAGTAAT
CTCTTAGTGGGAAGAGAGTA

Product: gas vesicle synthesis protein GvpA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 103; Mature: 103

Protein sequence:

>103_residues
MKTSANIATSASGNGLADVLERVLDKGVVIAGDISVSIASTELLNIKIRLLISSVERAKEIGINWWESDPYFSSQNNSLV
QANEKLLERVASLESEIKALRSN

Sequences:

>Translated_103_residues
MKTSANIATSASGNGLADVLERVLDKGVVIAGDISVSIASTELLNIKIRLLISSVERAKEIGINWWESDPYFSSQNNSLV
QANEKLLERVASLESEIKALRSN
>Mature_103_residues
MKTSANIATSASGNGLADVLERVLDKGVVIAGDISVSIASTELLNIKIRLLISSVERAKEIGINWWESDPYFSSQNNSLV
QANEKLLERVASLESEIKALRSN

Specific function: Gas vesicles are small, hollow, gas filled protein structures that are found in several microbial planktonic microorganisms. They allow the positioning of the organism at the favorable depth for growth. This protein could be important for the shape determ

COG id: NA

COG function: NA

Gene ontology:

Cell location: Vacuole, gas vesicle (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gas vesicle protein type A family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000638
- InterPro:   IPR018493 [H]

Pfam domain/function: PF00741 Gas_vesicle [H]

EC number: NA

Molecular weight: Translated: 11159; Mature: 11159

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: PS00234 GAS_VESICLE_A_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTSANIATSASGNGLADVLERVLDKGVVIAGDISVSIASTELLNIKIRLLISSVERAKE
CCCCCCCCCCCCCCCHHHHHHHHHHCCEEEECCCEEEECCHHHHHHHHHHHHHHHHHHHH
IGINWWESDPYFSSQNNSLVQANEKLLERVASLESEIKALRSN
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKTSANIATSASGNGLADVLERVLDKGVVIAGDISVSIASTELLNIKIRLLISSVERAKE
CCCCCCCCCCCCCCCHHHHHHHHHHCCEEEECCCEEEECCHHHHHHHHHHHHHHHHHHHH
IGINWWESDPYFSSQNNSLVQANEKLLERVASLESEIKALRSN
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11759840 [H]