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The map label for this gene is gvpA [H]

Identifier: 113475957

GI number: 113475957

Start: 3597655

End: 3597819

Strand: Direct

Name: gvpA [H]

Synonym: Tery_2323

Alternate gene names: 113475957

Gene position: 3597655-3597819 (Clockwise)

Preceding gene: 113475956

Following gene: 113475958

Centisome position: 46.42

GC content: 32.12

Gene sequence:

>165_bases
ATGTTTATCAGGGTTGACTTCCTTTTAGACAAAGGTGTAATTGTAGATGCTTGGGTACGTCTTTCTTTAGTAGTTATTGA
GCTACTAACAATTGAAGCAAAAATAGTTATTGCATCAGTAGAAGCTTACCTAAAGTATTCAGAAGCATTTTGTTTTAACT
ACTAA

Upstream 100 bases:

>100_bases
TACTGGCAATAGCAATAAGTTCAACACAAATTAAGTTAAAATTGAAGAATGTTGTTGAGAAAAAATATCAATAAGTTAAA
TATTTTTAGCATTATCAGTA

Downstream 100 bases:

>100_bases
CAATTGAAGCAAAAATAGTTATTGCATCAGTAGAAGCTTACCTAAAGTATTCAGAAGCATTTTGTTTTAACTACTTTAGC
AGCAGCAACAGGAAAAACAG

Product: gas vesicle synthesis protein GvpA

Products: NA

Alternate protein names: GVP [H]

Number of amino acids: Translated: 54; Mature: 54

Protein sequence:

>54_residues
MFIRVDFLLDKGVIVDAWVRLSLVVIELLTIEAKIVIASVEAYLKYSEAFCFNY

Sequences:

>Translated_54_residues
MFIRVDFLLDKGVIVDAWVRLSLVVIELLTIEAKIVIASVEAYLKYSEAFCFNY
>Mature_54_residues
MFIRVDFLLDKGVIVDAWVRLSLVVIELLTIEAKIVIASVEAYLKYSEAFCFNY

Specific function: Gas vesicles are small, hollow, gas filled protein structures that are found in several microbial planktonic microorganisms. They allow the positioning of the organism at the favorable depth for growth. GvpA type proteins form the essential core of the st

COG id: NA

COG function: NA

Gene ontology:

Cell location: Vacuole, gas vesicle membrane [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gas vesicle protein type A family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000638
- InterPro:   IPR018493 [H]

Pfam domain/function: PF00741 Gas_vesicle [H]

EC number: NA

Molecular weight: Translated: 6229; Mature: 6229

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFIRVDFLLDKGVIVDAWVRLSLVVIELLTIEAKIVIASVEAYLKYSEAFCFNY
CEEEEEEEECCCEEEHHHHHHHHHHHHHHHHHHEEEEEEHHHHHHHHHEEEECC
>Mature Secondary Structure
MFIRVDFLLDKGVIVDAWVRLSLVVIELLTIEAKIVIASVEAYLKYSEAFCFNY
CEEEEEEEECCCEEEHHHHHHHHHHHHHHHHHHEEEEEEHHHHHHHHHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA