Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475898

Identifier: 113475898

GI number: 113475898

Start: 3514663

End: 3515331

Strand: Direct

Name: 113475898

Synonym: Tery_2258

Alternate gene names: NA

Gene position: 3514663-3515331 (Clockwise)

Preceding gene: 113475897

Following gene: 113475900

Centisome position: 45.35

GC content: 32.74

Gene sequence:

>669_bases
ATGAGCAAACTCAAAAACAAATGGCTGGAAAATGGGGAAATTATAGTCGTTTTACTATTAGTAGAGGTTTTAAAAAAATT
GGTTTTACTCCTAAAAAAAACATCTGGTTATCAAGAAAGAGATGAATTAGAAATAGAAGAGTTCATGTTGAAACTAAATC
AAATAGACAACAAAAGTATTGTCTATGTAGATGAAGCCGGAATAGATAATCGGGAAGATTATTCCTATGATTATGGAGTT
AAAGGAAAAAGATTACCAGGTATGAAGTTAGGAAAAAGGACTGAGAGAGTAAGTTGGATTGCAGCTATAAATCAAGAAAA
AATGTTTGCTTCTTTAACATTTATAAGAAGTTGTAATCGTGATTTATTTGAGAACTGGTTGGAACATTGTTTACTACCAA
AATTACACCCAGGGCAAGTGATCATAGTGGATAACGCAACGTTTCATAAGTCAGTTGATATTGAAGAATTAGTAGCTAAA
GTCAAGTGTGAAATCTGGTATCTACCACCTTACTCACCAGATTTTAACAAGATAGAACGTTGGTGGTTTGTACTAAAAAA
TTGGATCAGACCAAGACTCAAAGAATTTAAGAATTTTAGAGACTGTGTAGATGCAGCTTTCATAATCCAATCCTCAAGTT
TTTTCCTAGGGAGCAAAGATATGCTATAG

Upstream 100 bases:

>100_bases
TTAACCACAGGCTCAATAGTCCCTAAGGCCAATGTACCTCCTCCTCAAATATCTAAAATTAAAGATTGGGAAGAATTTGA
AAAATTTCTTGAGGCTAATC

Downstream 100 bases:

>100_bases
AAATAATTAGTGTAGTTGCTCTTTGAGACGCTTGCTATCACACAAGAATGTGATTTTTGACTTGTCTGTTAAATCAACAG
GATTTACGCATAACCACTAT

Product: hypothetical protein

Products: NA

Alternate protein names: Transposase Of Insertion Sequence; Transposase And Inactivated Derivatives-Like Protein; Insertion Sequence Transposase Protein; Transposase For Insertion Sequence Element; LOW QUALITY PROTEIN Transposase; Degenerate Transposase; Transposase Family Protein; ISRin2 Transposase OrfB; ISSoc4 Transposase OrfAB; ISHde1 Transposase OrfB; Transposase And Inactivated Derivative; Transposase Fragment

Number of amino acids: Translated: 222; Mature: 221

Protein sequence:

>222_residues
MSKLKNKWLENGEIIVVLLLVEVLKKLVLLLKKTSGYQERDELEIEEFMLKLNQIDNKSIVYVDEAGIDNREDYSYDYGV
KGKRLPGMKLGKRTERVSWIAAINQEKMFASLTFIRSCNRDLFENWLEHCLLPKLHPGQVIIVDNATFHKSVDIEELVAK
VKCEIWYLPPYSPDFNKIERWWFVLKNWIRPRLKEFKNFRDCVDAAFIIQSSSFFLGSKDML

Sequences:

>Translated_222_residues
MSKLKNKWLENGEIIVVLLLVEVLKKLVLLLKKTSGYQERDELEIEEFMLKLNQIDNKSIVYVDEAGIDNREDYSYDYGV
KGKRLPGMKLGKRTERVSWIAAINQEKMFASLTFIRSCNRDLFENWLEHCLLPKLHPGQVIIVDNATFHKSVDIEELVAK
VKCEIWYLPPYSPDFNKIERWWFVLKNWIRPRLKEFKNFRDCVDAAFIIQSSSFFLGSKDML
>Mature_221_residues
SKLKNKWLENGEIIVVLLLVEVLKKLVLLLKKTSGYQERDELEIEEFMLKLNQIDNKSIVYVDEAGIDNREDYSYDYGVK
GKRLPGMKLGKRTERVSWIAAINQEKMFASLTFIRSCNRDLFENWLEHCLLPKLHPGQVIIVDNATFHKSVDIEELVAKV
KCEIWYLPPYSPDFNKIERWWFVLKNWIRPRLKEFKNFRDCVDAAFIIQSSSFFLGSKDML

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26199; Mature: 26068

Theoretical pI: Translated: 8.29; Mature: 8.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKLKNKWLENGEIIVVLLLVEVLKKLVLLLKKTSGYQERDELEIEEFMLKLNQIDNKSI
CCCHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCEE
VYVDEAGIDNREDYSYDYGVKGKRLPGMKLGKRTERVSWIAAINQEKMFASLTFIRSCNR
EEEECCCCCCCCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHCHHHHHHHHHHHHHCCH
DLFENWLEHCLLPKLHPGQVIIVDNATFHKSVDIEELVAKVKCEIWYLPPYSPDFNKIER
HHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHEEEEECCCCCCCHHHHHH
WWFVLKNWIRPRLKEFKNFRDCVDAAFIIQSSSFFLGSKDML
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
SKLKNKWLENGEIIVVLLLVEVLKKLVLLLKKTSGYQERDELEIEEFMLKLNQIDNKSI
CCHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCEE
VYVDEAGIDNREDYSYDYGVKGKRLPGMKLGKRTERVSWIAAINQEKMFASLTFIRSCNR
EEEECCCCCCCCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHCHHHHHHHHHHHHHCCH
DLFENWLEHCLLPKLHPGQVIIVDNATFHKSVDIEELVAKVKCEIWYLPPYSPDFNKIER
HHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHEEEEECCCCCCCHHHHHH
WWFVLKNWIRPRLKEFKNFRDCVDAAFIIQSSSFFLGSKDML
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA