Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475863

Identifier: 113475863

GI number: 113475863

Start: 3464417

End: 3465613

Strand: Direct

Name: 113475863

Synonym: Tery_2222

Alternate gene names: NA

Gene position: 3464417-3465613 (Clockwise)

Preceding gene: 113475859

Following gene: 113475866

Centisome position: 44.7

GC content: 33.17

Gene sequence:

>1197_bases
ATGAAAACAAAAAATATACTTTTTTTAAGTAATGGTCATGGAGAAGATGCCCATAATTGTCAAATTATTAAAGCTTTTAC
AAAAATTTCTCCAGATACAAATATATCAGCTTTACCTATTGTTGGTGTTGGTAATAGTTATGAAAATTTGAATATACCAA
TTATTGGTCCTCGAGTAAATATGCCATCAGGAGGATTTTTATATCTCAGTCCTTTATTATTATTTGAAGATTTGGGAAAA
GGTTTAATTAGTTTAACTTGGCAGAAGTTACAAACTATTTGGACATTTGCGAAAAACTGTGATTTAATTATGGCTACTGG
AGATATTGTAGTGGCAGCTATGGCTTATTCGACAAGGCTTCCTTATATGATATTTCTTTCGGCTGATTCTAGTTATTATG
AAGGTCGGATTAATTTGGGTTTAATATTGCCAAAGTTACTTCATAATTCTCGATGTTTAAAGGTTTTTGCTAGGGATGCT
TTGACGGCTAAAGATTTAAAAAGACAAGGAGTTACAAAAACAGAATTTGTTGGTACTCCAGTGATGGATAATTTAATTTC
AACTGGAAAAAATTTACGGCTTAAAACGGAATTGTTTACTATTGCTATTTTGCCTGGTTCTCGGTTGCCGGAAGCTGGTA
AAAATTTATGTTTGCTGTTGAAACTGGTTAGAGAAATTGTCAAAGTTATGGGAGTAAATGTTTGTCAGTTTCGAGCTGCA
ATTGTTCCTATTTTAATGTTTGAATTAGAGGCGATCGCTATTTCTGAAGGTTGGGAATGTCAAGGAAGTAAGCTAACATT
TTTTACTCAGGAATATACAATAGAAGTAATTTGTTATGAGGATGCTTTTGCAGATATTTTACAACATTCAAGTTTGGTAA
TTGGTATGGCTGGAACTGCAATAGAACAAGCTGTGGGTTTAGGCAAACCTGTAATTACTATTCCTGGTGAAGGTCCTTCA
TTTACCTATCGTTTTGCGGAAGCTCAAACTAGACTTTTAGGTTCTTCTGTACAGGTTATTGGTAAAAGAATGGCTAATAG
TTTTATTCTCCAAGAAGCAGCTAGAAAAGTTAAAGAAATTTTGGCAGATGAAGAGTATTTACAAAGTTGCATTAATAATG
GTTTAGAAAGGATGGGGAAGCCTGGTGCTAGTGAAAAAATAGCTAATTATCTTGTTAAGTATCTGAGTTCAGACTAA

Upstream 100 bases:

>100_bases
CCTAAAAAATCCAAATTACAAGGTGATGAAACTACCACTAATTTTTCGTAAAAACATGGATAATTAATCCTACTCCTAAT
CTTTCCTATTCTCTATTCGT

Downstream 100 bases:

>100_bases
GTTTATAGGGTGAATTACTAAGTTGATATTAAGATGGCTAGAGTATTTAATATTGATGGTTTTGGGAGGGGGATTTTCAG
GTTTTGCTTTCTGATGATTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 398; Mature: 398

Protein sequence:

>398_residues
MKTKNILFLSNGHGEDAHNCQIIKAFTKISPDTNISALPIVGVGNSYENLNIPIIGPRVNMPSGGFLYLSPLLLFEDLGK
GLISLTWQKLQTIWTFAKNCDLIMATGDIVVAAMAYSTRLPYMIFLSADSSYYEGRINLGLILPKLLHNSRCLKVFARDA
LTAKDLKRQGVTKTEFVGTPVMDNLISTGKNLRLKTELFTIAILPGSRLPEAGKNLCLLLKLVREIVKVMGVNVCQFRAA
IVPILMFELEAIAISEGWECQGSKLTFFTQEYTIEVICYEDAFADILQHSSLVIGMAGTAIEQAVGLGKPVITIPGEGPS
FTYRFAEAQTRLLGSSVQVIGKRMANSFILQEAARKVKEILADEEYLQSCINNGLERMGKPGASEKIANYLVKYLSSD

Sequences:

>Translated_398_residues
MKTKNILFLSNGHGEDAHNCQIIKAFTKISPDTNISALPIVGVGNSYENLNIPIIGPRVNMPSGGFLYLSPLLLFEDLGK
GLISLTWQKLQTIWTFAKNCDLIMATGDIVVAAMAYSTRLPYMIFLSADSSYYEGRINLGLILPKLLHNSRCLKVFARDA
LTAKDLKRQGVTKTEFVGTPVMDNLISTGKNLRLKTELFTIAILPGSRLPEAGKNLCLLLKLVREIVKVMGVNVCQFRAA
IVPILMFELEAIAISEGWECQGSKLTFFTQEYTIEVICYEDAFADILQHSSLVIGMAGTAIEQAVGLGKPVITIPGEGPS
FTYRFAEAQTRLLGSSVQVIGKRMANSFILQEAARKVKEILADEEYLQSCINNGLERMGKPGASEKIANYLVKYLSSD
>Mature_398_residues
MKTKNILFLSNGHGEDAHNCQIIKAFTKISPDTNISALPIVGVGNSYENLNIPIIGPRVNMPSGGFLYLSPLLLFEDLGK
GLISLTWQKLQTIWTFAKNCDLIMATGDIVVAAMAYSTRLPYMIFLSADSSYYEGRINLGLILPKLLHNSRCLKVFARDA
LTAKDLKRQGVTKTEFVGTPVMDNLISTGKNLRLKTELFTIAILPGSRLPEAGKNLCLLLKLVREIVKVMGVNVCQFRAA
IVPILMFELEAIAISEGWECQGSKLTFFTQEYTIEVICYEDAFADILQHSSLVIGMAGTAIEQAVGLGKPVITIPGEGPS
FTYRFAEAQTRLLGSSVQVIGKRMANSFILQEAARKVKEILADEEYLQSCINNGLERMGKPGASEKIANYLVKYLSSD

Specific function: Unknown

COG id: COG4370

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43743; Mature: 43743

Theoretical pI: Translated: 8.18; Mature: 8.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTKNILFLSNGHGEDAHNCQIIKAFTKISPDTNISALPIVGVGNSYENLNIPIIGPRVN
CCCCEEEEEECCCCCCCCCHHEEEHHHHCCCCCCCCEEEEEECCCCCCCCCEEEECCCCC
MPSGGFLYLSPLLLFEDLGKGLISLTWQKLQTIWTFAKNCDLIMATGDIVVAAMAYSTRL
CCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHCCC
PYMIFLSADSSYYEGRINLGLILPKLLHNSRCLKVFARDALTAKDLKRQGVTKTEFVGTP
CEEEEEECCCCEECCEEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHCCCH
VMDNLISTGKNLRLKTELFTIAILPGSRLPEAGKNLCLLLKLVREIVKVMGVNVCQFRAA
HHHHHHHCCCCCEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
IVPILMFELEAIAISEGWECQGSKLTFFTQEYTIEVICYEDAFADILQHSSLVIGMAGTA
HHHHHHHHHHHEEECCCCCCCCCEEEEEEEEEEEEEEEECHHHHHHHHCCCEEEEECHHH
IEQAVGLGKPVITIPGEGPSFTYRFAEAQTRLLGSSVQVIGKRMANSFILQEAARKVKEI
HHHHHCCCCCEEEECCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LADEEYLQSCINNGLERMGKPGASEKIANYLVKYLSSD
HCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKTKNILFLSNGHGEDAHNCQIIKAFTKISPDTNISALPIVGVGNSYENLNIPIIGPRVN
CCCCEEEEEECCCCCCCCCHHEEEHHHHCCCCCCCCEEEEEECCCCCCCCCEEEECCCCC
MPSGGFLYLSPLLLFEDLGKGLISLTWQKLQTIWTFAKNCDLIMATGDIVVAAMAYSTRL
CCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHCCC
PYMIFLSADSSYYEGRINLGLILPKLLHNSRCLKVFARDALTAKDLKRQGVTKTEFVGTP
CEEEEEECCCCEECCEEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHCCCH
VMDNLISTGKNLRLKTELFTIAILPGSRLPEAGKNLCLLLKLVREIVKVMGVNVCQFRAA
HHHHHHHCCCCCEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
IVPILMFELEAIAISEGWECQGSKLTFFTQEYTIEVICYEDAFADILQHSSLVIGMAGTA
HHHHHHHHHHHEEECCCCCCCCCEEEEEEEEEEEEEEEECHHHHHHHHCCCEEEEECHHH
IEQAVGLGKPVITIPGEGPSFTYRFAEAQTRLLGSSVQVIGKRMANSFILQEAARKVKEI
HHHHHCCCCCEEEECCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LADEEYLQSCINNGLERMGKPGASEKIANYLVKYLSSD
HCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA