| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113475849
Identifier: 113475849
GI number: 113475849
Start: 3438446
End: 3438727
Strand: Direct
Name: 113475849
Synonym: Tery_2208
Alternate gene names: NA
Gene position: 3438446-3438727 (Clockwise)
Preceding gene: 113475848
Following gene: 113475850
Centisome position: 44.37
GC content: 31.91
Gene sequence:
>282_bases GTGATTTTAACTAGAAAATTACTAGGAATTAGCGTTAATAAATATAAACAGTTAGCTTTGTTTATTGCTGGAGCAGTTGA GTTAGATATATCACCAACAGAATTATCTGACGAACAATGGAATGTTACCGGAAATTTTATTAGAAGTTCTAGAAAGGTTG GTAAAGAATTATTAGATGGTGATAATTATCCAGAACAAAAGGGGCTATGGATTGAAAAAAGCGGGCAATTTAAACAGTGC GATGCCACAGTTGAAATTGTCAGAAATATTTTTAACAAGTAG
Upstream 100 bases:
>100_bases ACTTAAACATCAAGACTTAAATCAAAATGAAATACCATTAGTTTCATCTTTCCATAAAATTCAAAATCACTACTTTACAA AATTTGCGGAATGGATAGAG
Downstream 100 bases:
>100_bases AATTTTTATGAGAGAAATTCCTGAAGGTTTATAGCTATGTAATTCCCAGGCAATAAATTTTTCTATGAGTTGGAAAAAAG CTTATTTCAGATGAAATTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 93; Mature: 93
Protein sequence:
>93_residues MILTRKLLGISVNKYKQLALFIAGAVELDISPTELSDEQWNVTGNFIRSSRKVGKELLDGDNYPEQKGLWIEKSGQFKQC DATVEIVRNIFNK
Sequences:
>Translated_93_residues MILTRKLLGISVNKYKQLALFIAGAVELDISPTELSDEQWNVTGNFIRSSRKVGKELLDGDNYPEQKGLWIEKSGQFKQC DATVEIVRNIFNK >Mature_93_residues MILTRKLLGISVNKYKQLALFIAGAVELDISPTELSDEQWNVTGNFIRSSRKVGKELLDGDNYPEQKGLWIEKSGQFKQC DATVEIVRNIFNK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10559; Mature: 10559
Theoretical pI: Translated: 8.47; Mature: 8.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILTRKLLGISVNKYKQLALFIAGAVELDISPTELSDEQWNVTGNFIRSSRKVGKELLDG CCCCCHHHCCCHHHHHHHHHHHHCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC DNYPEQKGLWIEKSGQFKQCDATVEIVRNIFNK CCCCCCCCEEEECCCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MILTRKLLGISVNKYKQLALFIAGAVELDISPTELSDEQWNVTGNFIRSSRKVGKELLDG CCCCCHHHCCCHHHHHHHHHHHHCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC DNYPEQKGLWIEKSGQFKQCDATVEIVRNIFNK CCCCCCCCEEEECCCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA