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The map label for this gene is crtI [H]

Identifier: 113475834

GI number: 113475834

Start: 3419070

End: 3420668

Strand: Direct

Name: crtI [H]

Synonym: Tery_2192

Alternate gene names: 113475834

Gene position: 3419070-3420668 (Clockwise)

Preceding gene: 113475830

Following gene: 113475835

Centisome position: 44.12

GC content: 34.4

Gene sequence:

>1599_bases
ATGACAGTCTCTAAGCAATCTACCTCATTAACTGATAAATTATCAGCAATACCTGAATATGATGCAGTTATAATTGGCTC
TGGCATTGGTGGCTTAGTTACAGCCACTCAACTTGTAGCTAAAGGAGCAAAAGTTATAGTCTTAGAAAGCTATATTATTC
CTGGTGGTAGTTCTGGTTACTTTGAAAGAGAAGGATACACATTTGATGTTGGTGCATCAATGATATTTGGTTTTGGCAAG
AAAGGTACAACAAATTTACTTACTCGTGCTTTAGATGCTGTCAATGTGAGCCTAGAAACAATTCCTGACCCGGTACAAAT
ACATTATCATTTACCAGATAATTTAGAATTAAAAGTTTACCAACACTATGAGAAGTTTATAGAAGAATTAACTAAAATAT
TTCCCCATGAAAAGAAAGGAATTAGACAATTTTATGATGAATGTTGGGCAGTATTTAATTGTCTCAATTCAATGGAATTA
TTATCTTTAGAAGAACTGCGATATCTTTCCAAATCATTTTTTCAAAATCCTGGTTCTTGTTTAGGGCTATTGAAGTATTT
GCCTCAAAATGTTGGTGATGTTGCACGTCGATATATTAATGATTCTAAGTTATTAAAATTTATTGATATGGAATGTTATT
GTTGGTCAGTAGTTCCGGCCAACTTAACTCCAATGATTAATGCTGGTATGGTATTTTCTGACCGACATTATGGTGGTATT
AATTATCCCAAAGGTGGGGTGGGAAAAATTTCCCAGAAATTAGTGGAAGGTTTGGAGAAAAATGGAGGAAAAATTAAATA
TCAAGCCCGTGTAAAAAAAATTATTATCGAAAACAAAAAAGCGGTAGGAGTGGAATTAACTAATGGTGAAATTTATCGAG
GTAAACGAATTATTTCTAATGCTACAAGATGGGATACTTTTGGCAAGTTAGTCCCTGAGAAAAATATGCCCCCAAGTGAG
ATGAAATGGCGGAGTAATTATCAAAAATCACCAAGTTTTTTAAGCTTGCATTTAGGAGTCGAAGCAACTGTATTTCCCCA
GGGTACAGAATGTCATCATATTCTCTTAGAAAATTGGGAAAAAATGGAAGCAGTAGAAGGTACAATTTTTGTTTCTATTC
CTACATTATTAGACCCAAGTTTGGCGCCAAAAGGATATCATATAGTTCATACTTTTACACCTAGTTATATAAAAGATTGG
CAAGGACTAAGTATAAAGGAATATGAAGCTAAAAAAGAGGCAGCAGCAGGGCGAGTTATTGAGAGATTAGAAAATATTTT
TCCCGGTTTAGATGCAGGTTTAGACTATGTGGAAGTTGGCACTGCGCGATCGCATCAAAGATTTTTAAATCGTGCAGATG
GAACTTATGGACCTATTCCTCAACGTAAATTAAAAGGTTTATTAGGAATGCCATTTAATCGTACTGCAATACCTGGTTTA
TATTGTGTTGGAGATAGTACATTTCCTGGTCAAGGTTTAAATGCTGTAGCATTTTCTGGTTTTGCTTGTGCTCATAGAGT
TGCTGCTGATTTGGGTTATAACTCTAAGGGCAAGTCAAAAGTCAATATAAACTTTACAAAAGTCAAAAATAATCTTTGA

Upstream 100 bases:

>100_bases
TTTTTTAATTATTAGTTAATACTTAACCAAGTTTACACTTCAAATTAAACACTATTATAACCACTAGACTAAAATCAAGA
AAAGTATCAAAGGTTTTACT

Downstream 100 bases:

>100_bases
CTGAGTTTTTTGTCCCTTATGTGGAGCAAACAGTATTTATAAATTTCCCAGCCTTAAATGCCTAGTACTAAAAAAATTAT
ATTTTATACTACATTTTATC

Product: FAD dependent oxidoreductase

Products: NA

Alternate protein names: Phytoene desaturase [H]

Number of amino acids: Translated: 532; Mature: 531

Protein sequence:

>532_residues
MTVSKQSTSLTDKLSAIPEYDAVIIGSGIGGLVTATQLVAKGAKVIVLESYIIPGGSSGYFEREGYTFDVGASMIFGFGK
KGTTNLLTRALDAVNVSLETIPDPVQIHYHLPDNLELKVYQHYEKFIEELTKIFPHEKKGIRQFYDECWAVFNCLNSMEL
LSLEELRYLSKSFFQNPGSCLGLLKYLPQNVGDVARRYINDSKLLKFIDMECYCWSVVPANLTPMINAGMVFSDRHYGGI
NYPKGGVGKISQKLVEGLEKNGGKIKYQARVKKIIIENKKAVGVELTNGEIYRGKRIISNATRWDTFGKLVPEKNMPPSE
MKWRSNYQKSPSFLSLHLGVEATVFPQGTECHHILLENWEKMEAVEGTIFVSIPTLLDPSLAPKGYHIVHTFTPSYIKDW
QGLSIKEYEAKKEAAAGRVIERLENIFPGLDAGLDYVEVGTARSHQRFLNRADGTYGPIPQRKLKGLLGMPFNRTAIPGL
YCVGDSTFPGQGLNAVAFSGFACAHRVAADLGYNSKGKSKVNINFTKVKNNL

Sequences:

>Translated_532_residues
MTVSKQSTSLTDKLSAIPEYDAVIIGSGIGGLVTATQLVAKGAKVIVLESYIIPGGSSGYFEREGYTFDVGASMIFGFGK
KGTTNLLTRALDAVNVSLETIPDPVQIHYHLPDNLELKVYQHYEKFIEELTKIFPHEKKGIRQFYDECWAVFNCLNSMEL
LSLEELRYLSKSFFQNPGSCLGLLKYLPQNVGDVARRYINDSKLLKFIDMECYCWSVVPANLTPMINAGMVFSDRHYGGI
NYPKGGVGKISQKLVEGLEKNGGKIKYQARVKKIIIENKKAVGVELTNGEIYRGKRIISNATRWDTFGKLVPEKNMPPSE
MKWRSNYQKSPSFLSLHLGVEATVFPQGTECHHILLENWEKMEAVEGTIFVSIPTLLDPSLAPKGYHIVHTFTPSYIKDW
QGLSIKEYEAKKEAAAGRVIERLENIFPGLDAGLDYVEVGTARSHQRFLNRADGTYGPIPQRKLKGLLGMPFNRTAIPGL
YCVGDSTFPGQGLNAVAFSGFACAHRVAADLGYNSKGKSKVNINFTKVKNNL
>Mature_531_residues
TVSKQSTSLTDKLSAIPEYDAVIIGSGIGGLVTATQLVAKGAKVIVLESYIIPGGSSGYFEREGYTFDVGASMIFGFGKK
GTTNLLTRALDAVNVSLETIPDPVQIHYHLPDNLELKVYQHYEKFIEELTKIFPHEKKGIRQFYDECWAVFNCLNSMELL
SLEELRYLSKSFFQNPGSCLGLLKYLPQNVGDVARRYINDSKLLKFIDMECYCWSVVPANLTPMINAGMVFSDRHYGGIN
YPKGGVGKISQKLVEGLEKNGGKIKYQARVKKIIIENKKAVGVELTNGEIYRGKRIISNATRWDTFGKLVPEKNMPPSEM
KWRSNYQKSPSFLSLHLGVEATVFPQGTECHHILLENWEKMEAVEGTIFVSIPTLLDPSLAPKGYHIVHTFTPSYIKDWQ
GLSIKEYEAKKEAAAGRVIERLENIFPGLDAGLDYVEVGTARSHQRFLNRADGTYGPIPQRKLKGLLGMPFNRTAIPGLY
CVGDSTFPGQGLNAVAFSGFACAHRVAADLGYNSKGKSKVNINFTKVKNNL

Specific function: This enzyme converts phytoene into lycopene via the intermediaries of phytofluene, zeta-carotene and neurosporene by the introduction of four double bonds [H]

COG id: COG1233

COG function: function code Q; Phytoene dehydrogenase and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the carotenoid/retinoid oxidoreductase family [H]

Homologues:

Organism=Homo sapiens, GI203098013, Length=518, Percent_Identity=22.7799227799228, Blast_Score=69, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002937
- InterPro:   IPR008150
- InterPro:   IPR014105 [H]

Pfam domain/function: PF01593 Amino_oxidase [H]

EC number: NA

Molecular weight: Translated: 59124; Mature: 58993

Theoretical pI: Translated: 9.08; Mature: 9.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVSKQSTSLTDKLSAIPEYDAVIIGSGIGGLVTATQLVAKGAKVIVLESYIIPGGSSGY
CCCCCCCCHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCEEEEEEEEECCCCCCCC
FEREGYTFDVGASMIFGFGKKGTTNLLTRALDAVNVSLETIPDPVQIHYHLPDNLELKVY
EECCCEEEECCCHHHCCCCCCCHHHHHHHHHHHHCCCHHCCCCCEEEEEECCCCCEEHHH
QHYEKFIEELTKIFPHEKKGIRQFYDECWAVFNCLNSMELLSLEELRYLSKSFFQNPGSC
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHH
LGLLKYLPQNVGDVARRYINDSKLLKFIDMECYCWSVVPANLTPMINAGMVFSDRHYGGI
HHHHHHHCCCHHHHHHHHHCHHHHHHHHCCEEEEEEEECCCCCCCCCCCEEEECCCCCCC
NYPKGGVGKISQKLVEGLEKNGGKIKYQARVKKIIIENKKAVGVELTNGEIYRGKRIISN
CCCCCCHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHCCCCEEEEEECCCCEEECHHHHCC
ATRWDTFGKLVPEKNMPPSEMKWRSNYQKSPSFLSLHLGVEATVFPQGTECHHILLENWE
CHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCEEEEEECCEEEECCCCCCHHHHHHHCHH
KMEAVEGTIFVSIPTLLDPSLAPKGYHIVHTFTPSYIKDWQGLSIKEYEAKKEAAAGRVI
HHHHHCCEEEEEEHHHCCCCCCCCCEEEEEECCCHHHHCCCCCCCHHHHHHHHHHHHHHH
ERLENIFPGLDAGLDYVEVGTARSHQRFLNRADGTYGPIPQRKLKGLLGMPFNRTAIPGL
HHHHHHCCCCCCCCCEEEECCCHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCEE
YCVGDSTFPGQGLNAVAFSGFACAHRVAADLGYNSKGKSKVNINFTKVKNNL
EEECCCCCCCCCCCHHHHCCHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCC
>Mature Secondary Structure 
TVSKQSTSLTDKLSAIPEYDAVIIGSGIGGLVTATQLVAKGAKVIVLESYIIPGGSSGY
CCCCCCCHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCEEEEEEEEECCCCCCCC
FEREGYTFDVGASMIFGFGKKGTTNLLTRALDAVNVSLETIPDPVQIHYHLPDNLELKVY
EECCCEEEECCCHHHCCCCCCCHHHHHHHHHHHHCCCHHCCCCCEEEEEECCCCCEEHHH
QHYEKFIEELTKIFPHEKKGIRQFYDECWAVFNCLNSMELLSLEELRYLSKSFFQNPGSC
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHH
LGLLKYLPQNVGDVARRYINDSKLLKFIDMECYCWSVVPANLTPMINAGMVFSDRHYGGI
HHHHHHHCCCHHHHHHHHHCHHHHHHHHCCEEEEEEEECCCCCCCCCCCEEEECCCCCCC
NYPKGGVGKISQKLVEGLEKNGGKIKYQARVKKIIIENKKAVGVELTNGEIYRGKRIISN
CCCCCCHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHCCCCEEEEEECCCCEEECHHHHCC
ATRWDTFGKLVPEKNMPPSEMKWRSNYQKSPSFLSLHLGVEATVFPQGTECHHILLENWE
CHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCEEEEEECCEEEECCCCCCHHHHHHHCHH
KMEAVEGTIFVSIPTLLDPSLAPKGYHIVHTFTPSYIKDWQGLSIKEYEAKKEAAAGRVI
HHHHHCCEEEEEEHHHCCCCCCCCCEEEEEECCCHHHHCCCCCCCHHHHHHHHHHHHHHH
ERLENIFPGLDAGLDYVEVGTARSHQRFLNRADGTYGPIPQRKLKGLLGMPFNRTAIPGL
HHHHHHCCCCCCCCCEEEECCCHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCEE
YCVGDSTFPGQGLNAVAFSGFACAHRVAADLGYNSKGKSKVNINFTKVKNNL
EEECCCCCCCCCCCHHHHCCHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2263648 [H]