Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

Click here to switch to the map view.

The map label for this gene is 113475691

Identifier: 113475691

GI number: 113475691

Start: 3170702

End: 3170875

Strand: Direct

Name: 113475691

Synonym: Tery_2035

Alternate gene names: NA

Gene position: 3170702-3170875 (Clockwise)

Preceding gene: 113475689

Following gene: 113475697

Centisome position: 40.91

GC content: 25.29

Gene sequence:

>174_bases
TTGTTAGAACAATTTCAAGAAAAAGAAGACGAATATTTATGGATACAAGAAATTTTAACTGAACTTGAATTAATTGTATA
TATTACAGAACAAAGCATATATAGGCCATACGCTGATGATAAACAGAAAAAATATTACTCCGGAAAAAAGAAAAATCATA
CATTGAAAAACTAA

Upstream 100 bases:

>100_bases
ATTCCAAATACTAGGAATATATTTTGGTTTCAGCTCATCAACAGCAAATAATATTTTTCATGATTGGATAAATATATTAC
AAAAGTTACTCCCTAGTAGC

Downstream 100 bases:

>100_bases
ATAATAACGACAGAAAAAGAGACAAAAATAGTAGATATGATTGTCGGAAAAAGAGGTCCAGAAAACGATGTAAATTTACT
CATGAAACAACAAAAAAAGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 57; Mature: 57

Protein sequence:

>57_residues
MLEQFQEKEDEYLWIQEILTELELIVYITEQSIYRPYADDKQKKYYSGKKKNHTLKN

Sequences:

>Translated_57_residues
MLEQFQEKEDEYLWIQEILTELELIVYITEQSIYRPYADDKQKKYYSGKKKNHTLKN
>Mature_57_residues
MLEQFQEKEDEYLWIQEILTELELIVYITEQSIYRPYADDKQKKYYSGKKKNHTLKN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7074; Mature: 7074

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEQFQEKEDEYLWIQEILTELELIVYITEQSIYRPYADDKQKKYYSGKKKNHTLKN
CCCCHHHCCCCCHHHHHHHHHHHHHHEECCCCCCCCCCCCHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MLEQFQEKEDEYLWIQEILTELELIVYITEQSIYRPYADDKQKKYYSGKKKNHTLKN
CCCCHHHCCCCCHHHHHHHHHHHHHHEECCCCCCCCCCCCHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA