Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is cysC [H]

Identifier: 113475590

GI number: 113475590

Start: 2978472

End: 2978999

Strand: Direct

Name: cysC [H]

Synonym: Tery_1923

Alternate gene names: 113475590

Gene position: 2978472-2978999 (Clockwise)

Preceding gene: 113475587

Following gene: 113475591

Centisome position: 38.43

GC content: 35.23

Gene sequence:

>528_bases
ATGGAAAAAGGATTTATTCTGTGGTTTACGGGGTTAAGTGGAGCTGGTAAAACAACTATCAGCAAAATTGTGGCAGAAAA
ATTAAAACAAAGAGGTCGGAAAGTAGAAATATTAGATGGGGATATAGTCAGAGAAAACTTATCAAAAGGGTTGACTTTTA
GCAAAGCGGACCGAGATATAAATATCCGGCGCATCGGATTTGTAGCTCATCTCTTAAGCAGGAATGGAGTAGTGGCGATA
ACTGCAGCAATTAGTCCTTACAAAGCAGTACGCAATGAAATTAGAGAAATGGATGAAAATTTTATAGAAGTTTATATCAA
TGCACCTTTAGAAGTATGTGAACAACGTGATGTTAAGGGGTTATATGGTAAAGCTAGGGCTGGAGAAATTAAAAATTTTA
CCGGTATTGATGATCCTTACGAACCACCAAATAATCCAGAAATTACTTGTTGCACAGATAAAGAAAGTTTAGATGAAAGT
GTAGCTAATGTAATTAGTAGTTTAGAAAAACTAGGTTATTTGGTTTGA

Upstream 100 bases:

>100_bases
TTTCTGGCAAAAAATTTGGTTAGACAATATGTATTAACTACTAATTCACAAATACAGGTAAAATATAACTTTAGTAAAAA
CTAAAAAAAATCAAGCTAAA

Downstream 100 bases:

>100_bases
AATTAGAGCAAGGGAGTGATCAATGAAGCAACAAGAATCAATAAATAAAGAAGATATCTTTAGCCGAAAATTATCTTTAT
CCCAGGTTTTAAGTTGTGGA

Product: adenylylsulfate kinase

Products: NA

Alternate protein names: APS kinase; ATP adenosine-5'-phosphosulfate 3'-phosphotransferase; Adenosine-5'-phosphosulfate kinase [H]

Number of amino acids: Translated: 175; Mature: 175

Protein sequence:

>175_residues
MEKGFILWFTGLSGAGKTTISKIVAEKLKQRGRKVEILDGDIVRENLSKGLTFSKADRDINIRRIGFVAHLLSRNGVVAI
TAAISPYKAVRNEIREMDENFIEVYINAPLEVCEQRDVKGLYGKARAGEIKNFTGIDDPYEPPNNPEITCCTDKESLDES
VANVISSLEKLGYLV

Sequences:

>Translated_175_residues
MEKGFILWFTGLSGAGKTTISKIVAEKLKQRGRKVEILDGDIVRENLSKGLTFSKADRDINIRRIGFVAHLLSRNGVVAI
TAAISPYKAVRNEIREMDENFIEVYINAPLEVCEQRDVKGLYGKARAGEIKNFTGIDDPYEPPNNPEITCCTDKESLDES
VANVISSLEKLGYLV
>Mature_175_residues
MEKGFILWFTGLSGAGKTTISKIVAEKLKQRGRKVEILDGDIVRENLSKGLTFSKADRDINIRRIGFVAHLLSRNGVVAI
TAAISPYKAVRNEIREMDENFIEVYINAPLEVCEQRDVKGLYGKARAGEIKNFTGIDDPYEPPNNPEITCCTDKESLDES
VANVISSLEKLGYLV

Specific function: Catalyzes the synthesis of activated sulfate [H]

COG id: COG0529

COG function: function code P; Adenylylsulfate kinase and related kinases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the APS kinase family [H]

Homologues:

Organism=Homo sapiens, GI46094058, Length=172, Percent_Identity=50.5813953488372, Blast_Score=170, Evalue=6e-43,
Organism=Homo sapiens, GI34447231, Length=172, Percent_Identity=47.093023255814, Blast_Score=153, Evalue=9e-38,
Organism=Homo sapiens, GI62912492, Length=172, Percent_Identity=47.093023255814, Blast_Score=153, Evalue=9e-38,
Organism=Escherichia coli, GI1789107, Length=149, Percent_Identity=52.3489932885906, Blast_Score=159, Evalue=1e-40,
Organism=Caenorhabditis elegans, GI17542422, Length=176, Percent_Identity=48.2954545454545, Blast_Score=157, Evalue=2e-39,
Organism=Saccharomyces cerevisiae, GI6322852, Length=171, Percent_Identity=43.859649122807, Blast_Score=144, Evalue=6e-36,
Organism=Drosophila melanogaster, GI116007838, Length=174, Percent_Identity=45.4022988505747, Blast_Score=147, Evalue=2e-36,
Organism=Drosophila melanogaster, GI24667044, Length=174, Percent_Identity=45.4022988505747, Blast_Score=147, Evalue=2e-36,
Organism=Drosophila melanogaster, GI24667032, Length=174, Percent_Identity=45.4022988505747, Blast_Score=147, Evalue=2e-36,
Organism=Drosophila melanogaster, GI24667028, Length=174, Percent_Identity=45.4022988505747, Blast_Score=147, Evalue=2e-36,
Organism=Drosophila melanogaster, GI24667036, Length=174, Percent_Identity=45.4022988505747, Blast_Score=147, Evalue=2e-36,
Organism=Drosophila melanogaster, GI24667040, Length=174, Percent_Identity=45.4022988505747, Blast_Score=147, Evalue=2e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002891 [H]

Pfam domain/function: PF01583 APS_kinase [H]

EC number: =2.7.1.25 [H]

Molecular weight: Translated: 19450; Mature: 19450

Theoretical pI: Translated: 6.02; Mature: 6.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKGFILWFTGLSGAGKTTISKIVAEKLKQRGRKVEILDGDIVRENLSKGLTFSKADRDI
CCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHCCCEECCCCCCC
NIRRIGFVAHLLSRNGVVAITAAISPYKAVRNEIREMDENFIEVYINAPLEVCEQRDVKG
CHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHEEEEECCCHHHHHHCCCCH
LYGKARAGEIKNFTGIDDPYEPPNNPEITCCTDKESLDESVANVISSLEKLGYLV
HCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MEKGFILWFTGLSGAGKTTISKIVAEKLKQRGRKVEILDGDIVRENLSKGLTFSKADRDI
CCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHCCCEECCCCCCC
NIRRIGFVAHLLSRNGVVAITAAISPYKAVRNEIREMDENFIEVYINAPLEVCEQRDVKG
CHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHEEEEECCCHHHHHHCCCCH
LYGKARAGEIKNFTGIDDPYEPPNNPEITCCTDKESLDESVANVISSLEKLGYLV
HCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA