| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113475537
Identifier: 113475537
GI number: 113475537
Start: 2856595
End: 2857356
Strand: Direct
Name: 113475537
Synonym: Tery_1869
Alternate gene names: NA
Gene position: 2856595-2857356 (Clockwise)
Preceding gene: 113475536
Following gene: 113475539
Centisome position: 36.86
GC content: 33.2
Gene sequence:
>762_bases ATGAAAAAACTTTGGAATTTTGTTAGTAATGAAGAAGATCCTTTCGGTCCAGGAGTCGATTTAATTGTTTCCTTACTTGC TATACTATTAGTAATGTTGGTGATTACTGCTGGAGCTTATCAAGATATTAATACTAAATATCAGGAATCAGTAATATCTT TAGAATCTTCAGAAAATAGAGTTAAGCAATTAACAAAATCACTAGATTTTGAAAAAGAAAAGAGTTCAGAATTATATAAA AAACTAACTGCTGAAACTTCTGCTAGAATTCCACAATTTCCTCCTAATATTGTTATTACTGCTGCAGAAGGATATGATTT TCCTTCAGGTAGTGCCGAGCTAACTGATGCTTTAAATAAATATATTCGTAATAAACTTCTTAAAAATATTGAGGAAAATA TTCAAAAATATGACGTTAATACCGTAGTTGTAATTGGTCATACAGATGGACAACCTGTTGCAGATCCTGTCAGTAACCTT GACGGCTTAGTTGAAGAGGTTGCTAGTGGAAGTAAATCTATAAAAGAATTACAAGAAGGGTCTAATATAGATTTAGGAAT TATGAGAGCATTAGCAGTCGTTAGAAAACTTCAAGACATTCAAAAGTCAGAGGGAAGACTTAAAGGTATTGACCCGTTGA AGGGTTTTCGCGCATATTCTTCGGGTCCATTAACCTTAAAAAATGGAGAATTTGCTCAACCTAATGAAAACCCTGATCAA CAGAGGCGACGTATTGAGATTCGTTTTACTAATTCGGAGTAA
Upstream 100 bases:
>100_bases AGGACAGTCAATAAATCTTTGAATAAACCACTCCTACAAAGAATTAAAAACATATTTAATTAGATAATAAATTAACCATA AATTAGAATTTTATTTGAGG
Downstream 100 bases:
>100_bases CAAGCAAGCTATAATTTATACTAACCATGAGCAATATTTTTTACTTTTTATTGAGTAGCAGACTCACCCGTAACCCTTTC GTTGGATAGGAAGTAGGGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 253; Mature: 253
Protein sequence:
>253_residues MKKLWNFVSNEEDPFGPGVDLIVSLLAILLVMLVITAGAYQDINTKYQESVISLESSENRVKQLTKSLDFEKEKSSELYK KLTAETSARIPQFPPNIVITAAEGYDFPSGSAELTDALNKYIRNKLLKNIEENIQKYDVNTVVVIGHTDGQPVADPVSNL DGLVEEVASGSKSIKELQEGSNIDLGIMRALAVVRKLQDIQKSEGRLKGIDPLKGFRAYSSGPLTLKNGEFAQPNENPDQ QRRRIEIRFTNSE
Sequences:
>Translated_253_residues MKKLWNFVSNEEDPFGPGVDLIVSLLAILLVMLVITAGAYQDINTKYQESVISLESSENRVKQLTKSLDFEKEKSSELYK KLTAETSARIPQFPPNIVITAAEGYDFPSGSAELTDALNKYIRNKLLKNIEENIQKYDVNTVVVIGHTDGQPVADPVSNL DGLVEEVASGSKSIKELQEGSNIDLGIMRALAVVRKLQDIQKSEGRLKGIDPLKGFRAYSSGPLTLKNGEFAQPNENPDQ QRRRIEIRFTNSE >Mature_253_residues MKKLWNFVSNEEDPFGPGVDLIVSLLAILLVMLVITAGAYQDINTKYQESVISLESSENRVKQLTKSLDFEKEKSSELYK KLTAETSARIPQFPPNIVITAAEGYDFPSGSAELTDALNKYIRNKLLKNIEENIQKYDVNTVVVIGHTDGQPVADPVSNL DGLVEEVASGSKSIKELQEGSNIDLGIMRALAVVRKLQDIQKSEGRLKGIDPLKGFRAYSSGPLTLKNGEFAQPNENPDQ QRRRIEIRFTNSE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28113; Mature: 28113
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLWNFVSNEEDPFGPGVDLIVSLLAILLVMLVITAGAYQDINTKYQESVISLESSENR CCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCHHHH VKQLTKSLDFEKEKSSELYKKLTAETSARIPQFPPNIVITAAEGYDFPSGSAELTDALNK HHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHH YIRNKLLKNIEENIQKYDVNTVVVIGHTDGQPVADPVSNLDGLVEEVASGSKSIKELQEG HHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCC SNIDLGIMRALAVVRKLQDIQKSEGRLKGIDPLKGFRAYSSGPLTLKNGEFAQPNENPDQ CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCEEECCCCCCCCCCCHHH QRRRIEIRFTNSE HHHEEEEEECCCC >Mature Secondary Structure MKKLWNFVSNEEDPFGPGVDLIVSLLAILLVMLVITAGAYQDINTKYQESVISLESSENR CCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCHHHH VKQLTKSLDFEKEKSSELYKKLTAETSARIPQFPPNIVITAAEGYDFPSGSAELTDALNK HHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHH YIRNKLLKNIEENIQKYDVNTVVVIGHTDGQPVADPVSNLDGLVEEVASGSKSIKELQEG HHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCC SNIDLGIMRALAVVRKLQDIQKSEGRLKGIDPLKGFRAYSSGPLTLKNGEFAQPNENPDQ CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCEEECCCCCCCCCCCHHH QRRRIEIRFTNSE HHHEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA