Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475535

Identifier: 113475535

GI number: 113475535

Start: 2853857

End: 2854648

Strand: Direct

Name: 113475535

Synonym: Tery_1867

Alternate gene names: NA

Gene position: 2853857-2854648 (Clockwise)

Preceding gene: 113475534

Following gene: 113475536

Centisome position: 36.82

GC content: 32.07

Gene sequence:

>792_bases
TTGGTTGTTGTTACTTGTTCAGATAATAAAACTGCATATTCAGTTGCCTATAGTTTGACTGAGAAAATTTCAGTCTCAAA
CAAGAGGTTGTTTACAGGAGGGCTAGGAGCTTCTAAAAAATTAGATTACGCAATAAATATAGATAACATTGTTATTAATT
CAGCTATTGGAAAAGAGTCAAGCTTGATTCTTGTAGACAGCTATGAAGCACAAACTTTTTTAGATTCTCTGGCTGTAGAA
TTTTCTACGGCAGAGCAGATCAAACAACAGTTAAGAAATAGTCAAAGATTTTGCATCTGTATAGCTCAATCAAAAGTATT
AAAAAGTACACTAGAAAGGAAACAGATTAAATCTCTGTCATTCCCGCACTTGGAAGTTCCGTTTGTAGAGTCAAAAGCTA
CAAATGAAAATATAGACCAACAGATAGGTATCTATGAAAAAGAAGATGGTGCTGCACTACATGAGAAAGTAGACGTTCTA
CGCAAGACTGTACTATATGTAGCAAGATTCTTTCAAGGTTTAAGTATCAGTGATTTTGAGCGCATTGTTTGTTTTTTACT
AGGAGAACAAACAACTCTAATTGAGGAGAAAAATAAAGTTGAAACTCCTGTGAATTCTGACTCAACAGTTTCATTAACAA
TTAGAGATATTATCATGCCTAAAGTTTACGTTTTAGAGAATGTGATTAAAAGAATTAGTGAAAATGAAGCTTCTCAAATA
AAAAAACAAATAGAAAAATCAGATACCAAAAAGTTGGTGATTATTGATGAAAAAACTCAGACATTTTTTTAG

Upstream 100 bases:

>100_bases
AATTGATCCAATAAAACCTTTACCTCCAAAGTCAAAAAGTCTTCCTGATGTCGGAATTGATGATTTATCTGATTATTCCC
AGAAATTACAAGAAGACTAT

Downstream 100 bases:

>100_bases
ATAGAATTACTTGAACGAGAGACTCCGTTAAATATTCAAGCGAAGAAGTTAATTAAGGCGCAAGAGCAGATAACTCAAGA
TCAAAAGCTGCGTCTAGTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 263; Mature: 263

Protein sequence:

>263_residues
MVVVTCSDNKTAYSVAYSLTEKISVSNKRLFTGGLGASKKLDYAINIDNIVINSAIGKESSLILVDSYEAQTFLDSLAVE
FSTAEQIKQQLRNSQRFCICIAQSKVLKSTLERKQIKSLSFPHLEVPFVESKATNENIDQQIGIYEKEDGAALHEKVDVL
RKTVLYVARFFQGLSISDFERIVCFLLGEQTTLIEEKNKVETPVNSDSTVSLTIRDIIMPKVYVLENVIKRISENEASQI
KKQIEKSDTKKLVIIDEKTQTFF

Sequences:

>Translated_263_residues
MVVVTCSDNKTAYSVAYSLTEKISVSNKRLFTGGLGASKKLDYAINIDNIVINSAIGKESSLILVDSYEAQTFLDSLAVE
FSTAEQIKQQLRNSQRFCICIAQSKVLKSTLERKQIKSLSFPHLEVPFVESKATNENIDQQIGIYEKEDGAALHEKVDVL
RKTVLYVARFFQGLSISDFERIVCFLLGEQTTLIEEKNKVETPVNSDSTVSLTIRDIIMPKVYVLENVIKRISENEASQI
KKQIEKSDTKKLVIIDEKTQTFF
>Mature_263_residues
MVVVTCSDNKTAYSVAYSLTEKISVSNKRLFTGGLGASKKLDYAINIDNIVINSAIGKESSLILVDSYEAQTFLDSLAVE
FSTAEQIKQQLRNSQRFCICIAQSKVLKSTLERKQIKSLSFPHLEVPFVESKATNENIDQQIGIYEKEDGAALHEKVDVL
RKTVLYVARFFQGLSISDFERIVCFLLGEQTTLIEEKNKVETPVNSDSTVSLTIRDIIMPKVYVLENVIKRISENEASQI
KKQIEKSDTKKLVIIDEKTQTFF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29633; Mature: 29633

Theoretical pI: Translated: 6.55; Mature: 6.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVVVTCSDNKTAYSVAYSLTEKISVSNKRLFTGGLGASKKLDYAINIDNIVINSAIGKES
CEEEEECCCCEEEHHHHHHHHHHCCCCCEEEECCCCCCCCEEEEEEECCEEEECCCCCCC
SLILVDSYEAQTFLDSLAVEFSTAEQIKQQLRNSQRFCICIAQSKVLKSTLERKQIKSLS
CEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHCC
FPHLEVPFVESKATNENIDQQIGIYEKEDGAALHEKVDVLRKTVLYVARFFQGLSISDFE
CCCCCCCEECCCCCCCCCHHHCCCEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
RIVCFLLGEQTTLIEEKNKVETPVNSDSTVSLTIRDIIMPKVYVLENVIKRISENEASQI
HHHHHHHCCCHHHHHCCCCCCCCCCCCCEEEEEEHHHHCCHHHHHHHHHHHHCCCHHHHH
KKQIEKSDTKKLVIIDEKTQTFF
HHHHHHCCCCEEEEEECCCCCCC
>Mature Secondary Structure
MVVVTCSDNKTAYSVAYSLTEKISVSNKRLFTGGLGASKKLDYAINIDNIVINSAIGKES
CEEEEECCCCEEEHHHHHHHHHHCCCCCEEEECCCCCCCCEEEEEEECCEEEECCCCCCC
SLILVDSYEAQTFLDSLAVEFSTAEQIKQQLRNSQRFCICIAQSKVLKSTLERKQIKSLS
CEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHCC
FPHLEVPFVESKATNENIDQQIGIYEKEDGAALHEKVDVLRKTVLYVARFFQGLSISDFE
CCCCCCCEECCCCCCCCCHHHCCCEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
RIVCFLLGEQTTLIEEKNKVETPVNSDSTVSLTIRDIIMPKVYVLENVIKRISENEASQI
HHHHHHHCCCHHHHHCCCCCCCCCCCCCEEEEEEHHHHCCHHHHHHHHHHHHCCCHHHHH
KKQIEKSDTKKLVIIDEKTQTFF
HHHHHHCCCCEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA