| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113475535
Identifier: 113475535
GI number: 113475535
Start: 2853857
End: 2854648
Strand: Direct
Name: 113475535
Synonym: Tery_1867
Alternate gene names: NA
Gene position: 2853857-2854648 (Clockwise)
Preceding gene: 113475534
Following gene: 113475536
Centisome position: 36.82
GC content: 32.07
Gene sequence:
>792_bases TTGGTTGTTGTTACTTGTTCAGATAATAAAACTGCATATTCAGTTGCCTATAGTTTGACTGAGAAAATTTCAGTCTCAAA CAAGAGGTTGTTTACAGGAGGGCTAGGAGCTTCTAAAAAATTAGATTACGCAATAAATATAGATAACATTGTTATTAATT CAGCTATTGGAAAAGAGTCAAGCTTGATTCTTGTAGACAGCTATGAAGCACAAACTTTTTTAGATTCTCTGGCTGTAGAA TTTTCTACGGCAGAGCAGATCAAACAACAGTTAAGAAATAGTCAAAGATTTTGCATCTGTATAGCTCAATCAAAAGTATT AAAAAGTACACTAGAAAGGAAACAGATTAAATCTCTGTCATTCCCGCACTTGGAAGTTCCGTTTGTAGAGTCAAAAGCTA CAAATGAAAATATAGACCAACAGATAGGTATCTATGAAAAAGAAGATGGTGCTGCACTACATGAGAAAGTAGACGTTCTA CGCAAGACTGTACTATATGTAGCAAGATTCTTTCAAGGTTTAAGTATCAGTGATTTTGAGCGCATTGTTTGTTTTTTACT AGGAGAACAAACAACTCTAATTGAGGAGAAAAATAAAGTTGAAACTCCTGTGAATTCTGACTCAACAGTTTCATTAACAA TTAGAGATATTATCATGCCTAAAGTTTACGTTTTAGAGAATGTGATTAAAAGAATTAGTGAAAATGAAGCTTCTCAAATA AAAAAACAAATAGAAAAATCAGATACCAAAAAGTTGGTGATTATTGATGAAAAAACTCAGACATTTTTTTAG
Upstream 100 bases:
>100_bases AATTGATCCAATAAAACCTTTACCTCCAAAGTCAAAAAGTCTTCCTGATGTCGGAATTGATGATTTATCTGATTATTCCC AGAAATTACAAGAAGACTAT
Downstream 100 bases:
>100_bases ATAGAATTACTTGAACGAGAGACTCCGTTAAATATTCAAGCGAAGAAGTTAATTAAGGCGCAAGAGCAGATAACTCAAGA TCAAAAGCTGCGTCTAGTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 263; Mature: 263
Protein sequence:
>263_residues MVVVTCSDNKTAYSVAYSLTEKISVSNKRLFTGGLGASKKLDYAINIDNIVINSAIGKESSLILVDSYEAQTFLDSLAVE FSTAEQIKQQLRNSQRFCICIAQSKVLKSTLERKQIKSLSFPHLEVPFVESKATNENIDQQIGIYEKEDGAALHEKVDVL RKTVLYVARFFQGLSISDFERIVCFLLGEQTTLIEEKNKVETPVNSDSTVSLTIRDIIMPKVYVLENVIKRISENEASQI KKQIEKSDTKKLVIIDEKTQTFF
Sequences:
>Translated_263_residues MVVVTCSDNKTAYSVAYSLTEKISVSNKRLFTGGLGASKKLDYAINIDNIVINSAIGKESSLILVDSYEAQTFLDSLAVE FSTAEQIKQQLRNSQRFCICIAQSKVLKSTLERKQIKSLSFPHLEVPFVESKATNENIDQQIGIYEKEDGAALHEKVDVL RKTVLYVARFFQGLSISDFERIVCFLLGEQTTLIEEKNKVETPVNSDSTVSLTIRDIIMPKVYVLENVIKRISENEASQI KKQIEKSDTKKLVIIDEKTQTFF >Mature_263_residues MVVVTCSDNKTAYSVAYSLTEKISVSNKRLFTGGLGASKKLDYAINIDNIVINSAIGKESSLILVDSYEAQTFLDSLAVE FSTAEQIKQQLRNSQRFCICIAQSKVLKSTLERKQIKSLSFPHLEVPFVESKATNENIDQQIGIYEKEDGAALHEKVDVL RKTVLYVARFFQGLSISDFERIVCFLLGEQTTLIEEKNKVETPVNSDSTVSLTIRDIIMPKVYVLENVIKRISENEASQI KKQIEKSDTKKLVIIDEKTQTFF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29633; Mature: 29633
Theoretical pI: Translated: 6.55; Mature: 6.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVVVTCSDNKTAYSVAYSLTEKISVSNKRLFTGGLGASKKLDYAINIDNIVINSAIGKES CEEEEECCCCEEEHHHHHHHHHHCCCCCEEEECCCCCCCCEEEEEEECCEEEECCCCCCC SLILVDSYEAQTFLDSLAVEFSTAEQIKQQLRNSQRFCICIAQSKVLKSTLERKQIKSLS CEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHCC FPHLEVPFVESKATNENIDQQIGIYEKEDGAALHEKVDVLRKTVLYVARFFQGLSISDFE CCCCCCCEECCCCCCCCCHHHCCCEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH RIVCFLLGEQTTLIEEKNKVETPVNSDSTVSLTIRDIIMPKVYVLENVIKRISENEASQI HHHHHHHCCCHHHHHCCCCCCCCCCCCCEEEEEEHHHHCCHHHHHHHHHHHHCCCHHHHH KKQIEKSDTKKLVIIDEKTQTFF HHHHHHCCCCEEEEEECCCCCCC >Mature Secondary Structure MVVVTCSDNKTAYSVAYSLTEKISVSNKRLFTGGLGASKKLDYAINIDNIVINSAIGKES CEEEEECCCCEEEHHHHHHHHHHCCCCCEEEECCCCCCCCEEEEEEECCEEEECCCCCCC SLILVDSYEAQTFLDSLAVEFSTAEQIKQQLRNSQRFCICIAQSKVLKSTLERKQIKSLS CEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHCC FPHLEVPFVESKATNENIDQQIGIYEKEDGAALHEKVDVLRKTVLYVARFFQGLSISDFE CCCCCCCEECCCCCCCCCHHHCCCEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH RIVCFLLGEQTTLIEEKNKVETPVNSDSTVSLTIRDIIMPKVYVLENVIKRISENEASQI HHHHHHHCCCHHHHHCCCCCCCCCCCCCEEEEEEHHHHCCHHHHHHHHHHHHCCCHHHHH KKQIEKSDTKKLVIIDEKTQTFF HHHHHHCCCCEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA