| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113475489
Identifier: 113475489
GI number: 113475489
Start: 2776526
End: 2776834
Strand: Direct
Name: 113475489
Synonym: Tery_1820
Alternate gene names: NA
Gene position: 2776526-2776834 (Clockwise)
Preceding gene: 113475488
Following gene: 113475491
Centisome position: 35.83
GC content: 34.3
Gene sequence:
>309_bases ATGCAAGATATTAAAAAACAATTAGCTGAAAATTTGGATGTAGCTGAATGGAACTGGTTAGTACCTCATGTTAAACGTGA TTCTGTGGTAATTATAGACCAAAAATTGGATTTGCTAGATGTGGGAGTGGCGATCGCTTCTGATCATAAGTCTTCTGTAG AAAATTGGATCAGCCAAGAACTTATTTATAAGCCAACAACAGAACAGTTATCGACGTGGAATAGCAATGATACTAAAAAG TTTAATGCTTTGATAGTACAACCTTTTGTTTTAGTCCAAGAATATGAGGAAACTCAAGAGGAAAACTAA
Upstream 100 bases:
>100_bases CAACTAAAAAAGAAGAATTAGAACGGGTTAGTCTCAAGTGTGCGGATATAATTAACAAAATGCATGATTTGGGACGTTAA TAAATTTAATTACAAAAAAA
Downstream 100 bases:
>100_bases TGGAGAAGGTTGGCTCCTGTATAACCAGTAGTTAACCAAAGAATTCCTCTAATTCCATCTCGAATTGCTTTTTTTATGGG CTCGGGGGATCGCCCGGAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 102; Mature: 102
Protein sequence:
>102_residues MQDIKKQLAENLDVAEWNWLVPHVKRDSVVIIDQKLDLLDVGVAIASDHKSSVENWISQELIYKPTTEQLSTWNSNDTKK FNALIVQPFVLVQEYEETQEEN
Sequences:
>Translated_102_residues MQDIKKQLAENLDVAEWNWLVPHVKRDSVVIIDQKLDLLDVGVAIASDHKSSVENWISQELIYKPTTEQLSTWNSNDTKK FNALIVQPFVLVQEYEETQEEN >Mature_102_residues MQDIKKQLAENLDVAEWNWLVPHVKRDSVVIIDQKLDLLDVGVAIASDHKSSVENWISQELIYKPTTEQLSTWNSNDTKK FNALIVQPFVLVQEYEETQEEN
Specific function: Unknown
COG id: COG5626
COG function: function code S; Uncharacterized conserved small protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11839; Mature: 11839
Theoretical pI: Translated: 4.23; Mature: 4.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQDIKKQLAENLDVAEWNWLVPHVKRDSVVIIDQKLDLLDVGVAIASDHKSSVENWISQE CHHHHHHHHHCCCCCCCCEECCCCCCCCEEEECCCCCCHHHHHHHHCCCHHHHHHHHHHH LIYKPTTEQLSTWNSNDTKKFNALIVQPFVLVQEYEETQEEN HCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MQDIKKQLAENLDVAEWNWLVPHVKRDSVVIIDQKLDLLDVGVAIASDHKSSVENWISQE CHHHHHHHHHCCCCCCCCEECCCCCCCCEEEECCCCCCHHHHHHHHCCCHHHHHHHHHHH LIYKPTTEQLSTWNSNDTKKFNALIVQPFVLVQEYEETQEEN HCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA