Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475489

Identifier: 113475489

GI number: 113475489

Start: 2776526

End: 2776834

Strand: Direct

Name: 113475489

Synonym: Tery_1820

Alternate gene names: NA

Gene position: 2776526-2776834 (Clockwise)

Preceding gene: 113475488

Following gene: 113475491

Centisome position: 35.83

GC content: 34.3

Gene sequence:

>309_bases
ATGCAAGATATTAAAAAACAATTAGCTGAAAATTTGGATGTAGCTGAATGGAACTGGTTAGTACCTCATGTTAAACGTGA
TTCTGTGGTAATTATAGACCAAAAATTGGATTTGCTAGATGTGGGAGTGGCGATCGCTTCTGATCATAAGTCTTCTGTAG
AAAATTGGATCAGCCAAGAACTTATTTATAAGCCAACAACAGAACAGTTATCGACGTGGAATAGCAATGATACTAAAAAG
TTTAATGCTTTGATAGTACAACCTTTTGTTTTAGTCCAAGAATATGAGGAAACTCAAGAGGAAAACTAA

Upstream 100 bases:

>100_bases
CAACTAAAAAAGAAGAATTAGAACGGGTTAGTCTCAAGTGTGCGGATATAATTAACAAAATGCATGATTTGGGACGTTAA
TAAATTTAATTACAAAAAAA

Downstream 100 bases:

>100_bases
TGGAGAAGGTTGGCTCCTGTATAACCAGTAGTTAACCAAAGAATTCCTCTAATTCCATCTCGAATTGCTTTTTTTATGGG
CTCGGGGGATCGCCCGGAGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 102; Mature: 102

Protein sequence:

>102_residues
MQDIKKQLAENLDVAEWNWLVPHVKRDSVVIIDQKLDLLDVGVAIASDHKSSVENWISQELIYKPTTEQLSTWNSNDTKK
FNALIVQPFVLVQEYEETQEEN

Sequences:

>Translated_102_residues
MQDIKKQLAENLDVAEWNWLVPHVKRDSVVIIDQKLDLLDVGVAIASDHKSSVENWISQELIYKPTTEQLSTWNSNDTKK
FNALIVQPFVLVQEYEETQEEN
>Mature_102_residues
MQDIKKQLAENLDVAEWNWLVPHVKRDSVVIIDQKLDLLDVGVAIASDHKSSVENWISQELIYKPTTEQLSTWNSNDTKK
FNALIVQPFVLVQEYEETQEEN

Specific function: Unknown

COG id: COG5626

COG function: function code S; Uncharacterized conserved small protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11839; Mature: 11839

Theoretical pI: Translated: 4.23; Mature: 4.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQDIKKQLAENLDVAEWNWLVPHVKRDSVVIIDQKLDLLDVGVAIASDHKSSVENWISQE
CHHHHHHHHHCCCCCCCCEECCCCCCCCEEEECCCCCCHHHHHHHHCCCHHHHHHHHHHH
LIYKPTTEQLSTWNSNDTKKFNALIVQPFVLVQEYEETQEEN
HCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MQDIKKQLAENLDVAEWNWLVPHVKRDSVVIIDQKLDLLDVGVAIASDHKSSVENWISQE
CHHHHHHHHHCCCCCCCCEECCCCCCCCEEEECCCCCCHHHHHHHHCCCHHHHHHHHHHH
LIYKPTTEQLSTWNSNDTKKFNALIVQPFVLVQEYEETQEEN
HCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA