| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is zraS [H]
Identifier: 113475352
GI number: 113475352
Start: 2539184
End: 2541211
Strand: Direct
Name: zraS [H]
Synonym: Tery_1669
Alternate gene names: 113475352
Gene position: 2539184-2541211 (Clockwise)
Preceding gene: 113475351
Following gene: 113475353
Centisome position: 32.76
GC content: 36.74
Gene sequence:
>2028_bases ATGATGAGAAAACTTTTGTACTTATTAAAACAATATCAAGGGACAGGAGTAGTAGGATTAATTGGTATTACTTTTTCGAT TACCGCTATGCTCATAGTTGATAACTGGGAACTAGCAATAGATAAAGAGCAGTTTCAACAACAATCTACTGTTTTGGTAA ATGAGTTCCAGAGGCAATTAGATGGTTACAACCAACTAACTAGATCCGTAGGTACCTTCCTAAATATGTCTCAAGAATTG ACGAGAGAAGAATTTGAAGAATTGACCAGCCCCCTATTACCTTACTATGATGGTTTTTTAGCATTAGGCTGGAGTCAGAA AGTAAAGAATCAGGAACGATCGCTGTATGAGCAAAAATTACAAGCCCAAGGAATAATAAATTTTAAGATTAGCGAACGTA ACCACAAAGGAAATCAAGTACTGGCAGGCGATCGCTCGACCTACTTCCCCACAACCTATATTGAACCCTTAGATAGATGG CAAAACTATATTGGTTGGGATGCTGCTGCAGACAGAAAACGTTTGCTGAGTATAGAAAAAGCAGAACGTACAGGAGTAAC TGTAAGTACACCTTTAGTGCAGTTAGAAAATGGCGAACCAGGCTTTGTGCTTTACTATCCGGTCTTTGGTTCTAAGAACT TGAATTCTCAATCCCTTGAATCAGAAAAACTTGACAGCAATAGAGAATTGCAAGGAGTAGTATTTGGTTTTTATGAAGTT ATGACTTGGGTTGAAAAAGCCATCAAAAATCTTAACCTTAACGGACTTAATTTCTATCTCTATAGTTTACCAGAAGATCA ATTAGATTCTGCTTTAAACAAAACCGCTATTACTGCCACTGACTATTTCCTTGTAGCATACAAAGATGATTCCCAAAGCT TGACAGCATCTCCTCAAGTTGCGAATTTAGCACTCATTGATAGCCCTAAAGAGCAGCGATCACATCTGTGTCGTTATAGC GATGAGTGGCAATTTTGTATTCGTTCAATTCATGTAGGGCAACAGGAATTTTCCTTGCTAATATTACCTGCTTCTAATCG TTCTATAACTGTTTGGTCTTCTGAAATAGTTTTGGTATTAGGATTATTAGTGACAGCCTCTTTAGTAATGTATTTCTTAA TTTCCCATCAGGCAACTTTAAAAATTGAAACCAAAAACCGGAAGTTAGAAAAACTAGTGCAAGAAATACAGCAGACTAAA CTACAACTGGTACAAACAGAAAAAATGTCAAGTTTAGGTCTGTTGATAGCAGGTGTTGCCCATGAAATCAAGAATCCGAT CAGTTTTATTTCGGGAAACATTAAATATGCAAGCCATTATTTTCAAGATTTGTTGAATTTAATTCAGCTCTATCAAGTCG AATATCCCAGTCCTACTCCAAAAATTGAAGCAGCTATTGAAGATATTGGTTTAGATTTTATTGTTCAAGATTTACCTAAG TTATTAAATTCTATGAACGTTGGGAGTACACGTCTGCACGAAATAGTTTTATCCCTGCGTAATTTTTCCCGCTCAGATGA GTCAAAAGTAAAGGAAGTGGATATTCACACGGGTATTGAAAGTACGTTAATGATTTTGGCACATCGCCTCAAGACCCAGC TAGCTCACCCAGAAATTATGGTGACTAAAAACTATGGTAATTTGCCTTTGATTGAATGTTATGCAGGTAAATTAAATCAA GTATTTATGAATATTTTGGCTAATGCTATTGATGCTCTAGAAGATTCAATTCTGGTAGGGGAGTTAAAGGAGCGATCGCC GATAATTTCAATTAAAACAGCTCAACTTAACACCGAGTGGATTACAATCCAAATTGCTGATAACGGTCCGGGTATTGCAC CAGATATTAAAACTCAGTTGTTTAATCCCTTTTTTACAACTAAACCAGTTGGCAAAGGAACGGGACTTGGACTGTCAATT AGTTATGACATTATTTGTGATCAGCATCAGGGACATTTACTGTGTTCCTCTGAAGAGGGAAAGGGTACAGAGTTTATCAT TAAGTTGCCGATCGCATTATCAACTTAA
Upstream 100 bases:
>100_bases TAAACTCAGAAAAATATATGTATAAATAACTTTCAACAAATTCTCAAAAAAAAATGTTAAAATCACCATAATCAGATTTT ATTAAAAATCAATTCTAATA
Downstream 100 bases:
>100_bases TTCAAGCTAGACGTGATACTAGATTCAGTTGTATTGATTAATATCAAAGGATTACGTACGCAATCTTTTGATAAGATAAA CCATTGTTTTAACCATAGAA
Product: periplasmic sensor signal transduction histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 675; Mature: 675
Protein sequence:
>675_residues MMRKLLYLLKQYQGTGVVGLIGITFSITAMLIVDNWELAIDKEQFQQQSTVLVNEFQRQLDGYNQLTRSVGTFLNMSQEL TREEFEELTSPLLPYYDGFLALGWSQKVKNQERSLYEQKLQAQGIINFKISERNHKGNQVLAGDRSTYFPTTYIEPLDRW QNYIGWDAAADRKRLLSIEKAERTGVTVSTPLVQLENGEPGFVLYYPVFGSKNLNSQSLESEKLDSNRELQGVVFGFYEV MTWVEKAIKNLNLNGLNFYLYSLPEDQLDSALNKTAITATDYFLVAYKDDSQSLTASPQVANLALIDSPKEQRSHLCRYS DEWQFCIRSIHVGQQEFSLLILPASNRSITVWSSEIVLVLGLLVTASLVMYFLISHQATLKIETKNRKLEKLVQEIQQTK LQLVQTEKMSSLGLLIAGVAHEIKNPISFISGNIKYASHYFQDLLNLIQLYQVEYPSPTPKIEAAIEDIGLDFIVQDLPK LLNSMNVGSTRLHEIVLSLRNFSRSDESKVKEVDIHTGIESTLMILAHRLKTQLAHPEIMVTKNYGNLPLIECYAGKLNQ VFMNILANAIDALEDSILVGELKERSPIISIKTAQLNTEWITIQIADNGPGIAPDIKTQLFNPFFTTKPVGKGTGLGLSI SYDIICDQHQGHLLCSSEEGKGTEFIIKLPIALST
Sequences:
>Translated_675_residues MMRKLLYLLKQYQGTGVVGLIGITFSITAMLIVDNWELAIDKEQFQQQSTVLVNEFQRQLDGYNQLTRSVGTFLNMSQEL TREEFEELTSPLLPYYDGFLALGWSQKVKNQERSLYEQKLQAQGIINFKISERNHKGNQVLAGDRSTYFPTTYIEPLDRW QNYIGWDAAADRKRLLSIEKAERTGVTVSTPLVQLENGEPGFVLYYPVFGSKNLNSQSLESEKLDSNRELQGVVFGFYEV MTWVEKAIKNLNLNGLNFYLYSLPEDQLDSALNKTAITATDYFLVAYKDDSQSLTASPQVANLALIDSPKEQRSHLCRYS DEWQFCIRSIHVGQQEFSLLILPASNRSITVWSSEIVLVLGLLVTASLVMYFLISHQATLKIETKNRKLEKLVQEIQQTK LQLVQTEKMSSLGLLIAGVAHEIKNPISFISGNIKYASHYFQDLLNLIQLYQVEYPSPTPKIEAAIEDIGLDFIVQDLPK LLNSMNVGSTRLHEIVLSLRNFSRSDESKVKEVDIHTGIESTLMILAHRLKTQLAHPEIMVTKNYGNLPLIECYAGKLNQ VFMNILANAIDALEDSILVGELKERSPIISIKTAQLNTEWITIQIADNGPGIAPDIKTQLFNPFFTTKPVGKGTGLGLSI SYDIICDQHQGHLLCSSEEGKGTEFIIKLPIALST >Mature_675_residues MMRKLLYLLKQYQGTGVVGLIGITFSITAMLIVDNWELAIDKEQFQQQSTVLVNEFQRQLDGYNQLTRSVGTFLNMSQEL TREEFEELTSPLLPYYDGFLALGWSQKVKNQERSLYEQKLQAQGIINFKISERNHKGNQVLAGDRSTYFPTTYIEPLDRW QNYIGWDAAADRKRLLSIEKAERTGVTVSTPLVQLENGEPGFVLYYPVFGSKNLNSQSLESEKLDSNRELQGVVFGFYEV MTWVEKAIKNLNLNGLNFYLYSLPEDQLDSALNKTAITATDYFLVAYKDDSQSLTASPQVANLALIDSPKEQRSHLCRYS DEWQFCIRSIHVGQQEFSLLILPASNRSITVWSSEIVLVLGLLVTASLVMYFLISHQATLKIETKNRKLEKLVQEIQQTK LQLVQTEKMSSLGLLIAGVAHEIKNPISFISGNIKYASHYFQDLLNLIQLYQVEYPSPTPKIEAAIEDIGLDFIVQDLPK LLNSMNVGSTRLHEIVLSLRNFSRSDESKVKEVDIHTGIESTLMILAHRLKTQLAHPEIMVTKNYGNLPLIECYAGKLNQ VFMNILANAIDALEDSILVGELKERSPIISIKTAQLNTEWITIQIADNGPGIAPDIKTQLFNPFFTTKPVGKGTGLGLSI SYDIICDQHQGHLLCSSEEGKGTEFIIKLPIALST
Specific function: Member of the two-component regulatory system zraS/zraR. May function as a membrane-associated protein kinase that phosphorylates zraR in response to high concentrations of zinc or lead in the medium [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1790436, Length=273, Percent_Identity=29.6703296703297, Blast_Score=104, Evalue=2e-23, Organism=Escherichia coli, GI1788549, Length=276, Percent_Identity=29.7101449275362, Blast_Score=99, Evalue=8e-22, Organism=Escherichia coli, GI145693157, Length=301, Percent_Identity=25.2491694352159, Blast_Score=72, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 76141; Mature: 76141
Theoretical pI: Translated: 5.43; Mature: 5.43
Prosite motif: PS50839 CHASE ; PS00041 HTH_ARAC_FAMILY_1 ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMRKLLYLLKQYQGTGVVGLIGITFSITAMLIVDNWELAIDKEQFQQQSTVLVNEFQRQL CHHHHHHHHHHHCCCCEEEEHHHHHEEEEEEEEECCEEEECHHHHHHHHHHHHHHHHHHH DGYNQLTRSVGTFLNMSQELTREEFEELTSPLLPYYDGFLALGWSQKVKNQERSLYEQKL HHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHCCCCEEECCHHHHHHHHHHHHHHHH QAQGIINFKISERNHKGNQVLAGDRSTYFPTTYIEPLDRWQNYIGWDAAADRKRLLSIEK HHCCEEEEEEECCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH AERTGVTVSTPLVQLENGEPGFVLYYPVFGSKNLNSQSLESEKLDSNRELQGVVFGFYEV HHHCCCEEECCEEEEECCCCCEEEEEEECCCCCCCCHHCCHHHCCCCCCHHHHHHHHHHH MTWVEKAIKNLNLNGLNFYLYSLPEDQLDSALNKTAITATDYFLVAYKDDSQSLTASPQV HHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHCCCEEEEEEEEEEEEECCCCCCCCCCCC ANLALIDSPKEQRSHLCRYSDEWQFCIRSIHVGQQEFSLLILPASNRSITVWSSEIVLVL EEEEEECCCHHHHHHHCCCCCHHHHHHHHHHCCCCCCEEEEEECCCCEEEEECCHHHHHH GLLVTASLVMYFLISHQATLKIETKNRKLEKLVQEIQQTKLQLVQTEKMSSLGLLIAGVA HHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HEIKNPISFISGNIKYASHYFQDLLNLIQLYQVEYPSPTPKIEAAIEDIGLDFIVQDLPK HHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHH LLNSMNVGSTRLHEIVLSLRNFSRSDESKVKEVDIHTGIESTLMILAHRLKTQLAHPEIM HHHCCCCCHHHHHHHHHHHHHCCCCCCHHHEEEEHHCCHHHHHHHHHHHHHHHHCCCEEE VTKNYGNLPLIECYAGKLNQVFMNILANAIDALEDSILVGELKERSPIISIKTAQLNTEW EEECCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHEECHHCCCCEEEEEEEEECCEE ITIQIADNGPGIAPDIKTQLFNPFFTTKPVGKGTGLGLSISYDIICDQHQGHLLCSSEEG EEEEEECCCCCCCCCHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCEEEECCCC KGTEFIIKLPIALST CCCEEEEEECEEECC >Mature Secondary Structure MMRKLLYLLKQYQGTGVVGLIGITFSITAMLIVDNWELAIDKEQFQQQSTVLVNEFQRQL CHHHHHHHHHHHCCCCEEEEHHHHHEEEEEEEEECCEEEECHHHHHHHHHHHHHHHHHHH DGYNQLTRSVGTFLNMSQELTREEFEELTSPLLPYYDGFLALGWSQKVKNQERSLYEQKL HHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHCCCCEEECCHHHHHHHHHHHHHHHH QAQGIINFKISERNHKGNQVLAGDRSTYFPTTYIEPLDRWQNYIGWDAAADRKRLLSIEK HHCCEEEEEEECCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH AERTGVTVSTPLVQLENGEPGFVLYYPVFGSKNLNSQSLESEKLDSNRELQGVVFGFYEV HHHCCCEEECCEEEEECCCCCEEEEEEECCCCCCCCHHCCHHHCCCCCCHHHHHHHHHHH MTWVEKAIKNLNLNGLNFYLYSLPEDQLDSALNKTAITATDYFLVAYKDDSQSLTASPQV HHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHCCCEEEEEEEEEEEEECCCCCCCCCCCC ANLALIDSPKEQRSHLCRYSDEWQFCIRSIHVGQQEFSLLILPASNRSITVWSSEIVLVL EEEEEECCCHHHHHHHCCCCCHHHHHHHHHHCCCCCCEEEEEECCCCEEEEECCHHHHHH GLLVTASLVMYFLISHQATLKIETKNRKLEKLVQEIQQTKLQLVQTEKMSSLGLLIAGVA HHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HEIKNPISFISGNIKYASHYFQDLLNLIQLYQVEYPSPTPKIEAAIEDIGLDFIVQDLPK HHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHH LLNSMNVGSTRLHEIVLSLRNFSRSDESKVKEVDIHTGIESTLMILAHRLKTQLAHPEIM HHHCCCCCHHHHHHHHHHHHHCCCCCCHHHEEEEHHCCHHHHHHHHHHHHHHHHCCCEEE VTKNYGNLPLIECYAGKLNQVFMNILANAIDALEDSILVGELKERSPIISIKTAQLNTEW EEECCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHEECHHCCCCEEEEEEEEECCEE ITIQIADNGPGIAPDIKTQLFNPFFTTKPVGKGTGLGLSISYDIICDQHQGHLLCSSEEG EEEEEECCCCCCCCCHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCEEEECCCC KGTEFIIKLPIALST CCCEEEEEECEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8265357; 9278503; 2666400; 11243806 [H]