| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113475335
Identifier: 113475335
GI number: 113475335
Start: 2513325
End: 2513828
Strand: Direct
Name: 113475335
Synonym: Tery_1649
Alternate gene names: NA
Gene position: 2513325-2513828 (Clockwise)
Preceding gene: 113475334
Following gene: 113475336
Centisome position: 32.43
GC content: 35.32
Gene sequence:
>504_bases ATGTCAGTTCAAAAAAAAAGCAATAAAAGTTTGCGATCATACTCTTTAGCAACTATATCCGATAATGGTTCCTTACATTT AACTGTGGGAGAATACGACAAACTCCTTGTAGGTGGTATACAATTAAGTAATGGCAAAAATTTCGACCCCGGAAACAGCA AAGATAAAGCTTTTAATATTGGGTCTTTAAGTGATAAGTTTCAGTTAGATGAATCTGTAGGTAAGAGCGATCGCCAAGAC TTTTACAAATTTACGGTAGAAGAACAGAGGAAAGTAGAGATTAAACTGATGGGTTTGACGGCTAATGCAGATTTATATTT ACTACCCGAAAAAGGTAAAGTCATTGACAAGTCTAAAAATGGCGGTAAGAAGAATGAAAAAATCACTGCGACTCTTGAGC CTGATACTACTTATTATTTGCAGGTGCAACCGAGAAATAAGACGATCAAAATGCTGATTATCATCTCAGTTTGGATATTA GAGAAGCAACAGATAATCCTATAG
Upstream 100 bases:
>100_bases CTTTAATAACAAAAGATAATAATTTTCCTGTAGCTAAAAAGCTAAACTAAACTCTCAAGCAAGACTTGTTTCAAAACAAA CATTTACTGATATTATTACC
Downstream 100 bases:
>100_bases TTCACAGTGATTTTCTTGAGAGAGTCGTGGAACTTACCAACCAATAGACATCTCCAAAATAGAAAATAAGGTAAAATTAT CAAAACCATTTATGTATGAA
Product: peptidase-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 167; Mature: 166
Protein sequence:
>167_residues MSVQKKSNKSLRSYSLATISDNGSLHLTVGEYDKLLVGGIQLSNGKNFDPGNSKDKAFNIGSLSDKFQLDESVGKSDRQD FYKFTVEEQRKVEIKLMGLTANADLYLLPEKGKVIDKSKNGGKKNEKITATLEPDTTYYLQVQPRNKTIKMLIIISVWIL EKQQIIL
Sequences:
>Translated_167_residues MSVQKKSNKSLRSYSLATISDNGSLHLTVGEYDKLLVGGIQLSNGKNFDPGNSKDKAFNIGSLSDKFQLDESVGKSDRQD FYKFTVEEQRKVEIKLMGLTANADLYLLPEKGKVIDKSKNGGKKNEKITATLEPDTTYYLQVQPRNKTIKMLIIISVWIL EKQQIIL >Mature_166_residues SVQKKSNKSLRSYSLATISDNGSLHLTVGEYDKLLVGGIQLSNGKNFDPGNSKDKAFNIGSLSDKFQLDESVGKSDRQDF YKFTVEEQRKVEIKLMGLTANADLYLLPEKGKVIDKSKNGGKKNEKITATLEPDTTYYLQVQPRNKTIKMLIIISVWILE KQQIIL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18775; Mature: 18644
Theoretical pI: Translated: 9.93; Mature: 9.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVQKKSNKSLRSYSLATISDNGSLHLTVGEYDKLLVGGIQLSNGKNFDPGNSKDKAFNI CCCCCCCCCCCEEEEEEEEECCCEEEEEECCCCEEEEEEEEECCCCCCCCCCCCCCEEEC GSLSDKFQLDESVGKSDRQDFYKFTVEEQRKVEIKLMGLTANADLYLLPEKGKVIDKSKN CCCCCCEEECHHCCCCCCCCCEEEEECCCCEEEEEEEEEECCCCEEEECCCCCEEECCCC GGKKNEKITATLEPDTTYYLQVQPRNKTIKMLIIISVWILEKQQIIL CCCCCCEEEEEECCCCEEEEEEECCCCEEEEEEEEEEEEECCCEECC >Mature Secondary Structure SVQKKSNKSLRSYSLATISDNGSLHLTVGEYDKLLVGGIQLSNGKNFDPGNSKDKAFNI CCCCCCCCCCEEEEEEEEECCCEEEEEECCCCEEEEEEEEECCCCCCCCCCCCCCEEEC GSLSDKFQLDESVGKSDRQDFYKFTVEEQRKVEIKLMGLTANADLYLLPEKGKVIDKSKN CCCCCCEEECHHCCCCCCCCCEEEEECCCCEEEEEEEEEECCCCEEEECCCCCEEECCCC GGKKNEKITATLEPDTTYYLQVQPRNKTIKMLIIISVWILEKQQIIL CCCCCCEEEEEECCCCEEEEEEECCCCEEEEEEEEEEEEECCCEECC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA