| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
Click here to switch to the map view.
The map label for this gene is bvgS [H]
Identifier: 113475330
GI number: 113475330
Start: 2508028
End: 2508810
Strand: Direct
Name: bvgS [H]
Synonym: Tery_1644
Alternate gene names: 113475330
Gene position: 2508028-2508810 (Clockwise)
Preceding gene: 113475329
Following gene: 113475332
Centisome position: 32.36
GC content: 37.42
Gene sequence:
>783_bases ATGTTTAAGCAACTGAAAAATACTCAACTAGCATATCAAATGGCTTCTGAAATGAGTAAGTTTAAAGCTGGTTTTTTGGC TCGAACTGCTCATGAGTTGCGATCGCCGATTAACAGTATGATTAGTGGACTACAGTTAATTATTTCTGATTTAGCGGATA ATCCGGAGGAGGAACGCCAGTTTGTTAACGAAGCTTATAATTGTGCTTTAAAAACTTTAGGTTTATTGGATGAGATTATT TATGTGTCTAAAACCGAACATGGTACTGAGAAAGTCGAGGTGGAGCCACTACAACTCATTCAAGTGTTTGAGGTGGTGGA AAATTTAACTTATATGCAAGCTGCTAATCGTGGTATTGGTTTGCAAATCTCACCTCCGAAACCAGATATTTATGTTTTGG CGGATAGGTCTCGTCTCAAACAGGTTTTGTTGAGTTTGATTGATACTGCGATCAGGCAAATGAATGAGGGTAATGTGAAT GTTTCTGTTCATCCTGCATGGGAATCTGGTTATGTTCATATTTGGATTGACGATCAACGTCCGGTAAGTGCTTGGAGTGA GTCTTGGGATTTACTCAAATATAATTTTGAGGAAAATGCTGAAAAAAATATGAGTGCTGATTTTCAGCTTTCTCCTGGTA TGAGGTTATTAATGAATCAAACTTTGTTAGGAATGATGAACGGACGTTTGGAAGTACTAACAACTCCTTGTGATGGTGAG GAGTCTAATTTTAATCGGACTCAATGTTCTATTCCTATGAGTATAAAGGGAACTAAAGGTTAA
Upstream 100 bases:
>100_bases ACTAGCTAGTAGGTTATGGTTTAGGCAAAAAAGTGAGGATTTATCAACCTCTTGTGTGGTTCCAAACCATTCTGAATCAA GTTCTGAGGAGCTAGAGAAT
Downstream 100 bases:
>100_bases CTTTATGTGGCAATTAGTGATGCTTGATTTCTAGTTGTTAATTCAATTTCTGCTTCTATAGGTTGATTGTACAATATCAT TGTTGTGCTTTGATTATATT
Product: histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 260; Mature: 260
Protein sequence:
>260_residues MFKQLKNTQLAYQMASEMSKFKAGFLARTAHELRSPINSMISGLQLIISDLADNPEEERQFVNEAYNCALKTLGLLDEII YVSKTEHGTEKVEVEPLQLIQVFEVVENLTYMQAANRGIGLQISPPKPDIYVLADRSRLKQVLLSLIDTAIRQMNEGNVN VSVHPAWESGYVHIWIDDQRPVSAWSESWDLLKYNFEENAEKNMSADFQLSPGMRLLMNQTLLGMMNGRLEVLTTPCDGE ESNFNRTQCSIPMSIKGTKG
Sequences:
>Translated_260_residues MFKQLKNTQLAYQMASEMSKFKAGFLARTAHELRSPINSMISGLQLIISDLADNPEEERQFVNEAYNCALKTLGLLDEII YVSKTEHGTEKVEVEPLQLIQVFEVVENLTYMQAANRGIGLQISPPKPDIYVLADRSRLKQVLLSLIDTAIRQMNEGNVN VSVHPAWESGYVHIWIDDQRPVSAWSESWDLLKYNFEENAEKNMSADFQLSPGMRLLMNQTLLGMMNGRLEVLTTPCDGE ESNFNRTQCSIPMSIKGTKG >Mature_260_residues MFKQLKNTQLAYQMASEMSKFKAGFLARTAHELRSPINSMISGLQLIISDLADNPEEERQFVNEAYNCALKTLGLLDEII YVSKTEHGTEKVEVEPLQLIQVFEVVENLTYMQAANRGIGLQISPPKPDIYVLADRSRLKQVLLSLIDTAIRQMNEGNVN VSVHPAWESGYVHIWIDDQRPVSAWSESWDLLKYNFEENAEKNMSADFQLSPGMRLLMNQTLLGMMNGRLEVLTTPCDGE ESNFNRTQCSIPMSIKGTKG
Specific function: Member of the two-component regulatory system BvgS/BvgA. Phosphorylates BvgA via a four-step phosphorelay in response to environmental signals [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI48994928, Length=169, Percent_Identity=28.9940828402367, Blast_Score=72, Evalue=3e-14, Organism=Escherichia coli, GI1788713, Length=225, Percent_Identity=27.5555555555556, Blast_Score=65, Evalue=4e-12, Organism=Escherichia coli, GI1789149, Length=156, Percent_Identity=28.8461538461538, Blast_Score=64, Evalue=9e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR011006 - InterPro: IPR000014 - InterPro: IPR000700 - InterPro: IPR013767 - InterPro: IPR001638 - InterPro: IPR004358 - InterPro: IPR008207 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 - InterPro: IPR001789 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF01627 Hpt; PF00989 PAS; PF00072 Response_reg; PF00497 SBP_bac_3 [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 29406; Mature: 29406
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKQLKNTQLAYQMASEMSKFKAGFLARTAHELRSPINSMISGLQLIISDLADNPEEERQ CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH FVNEAYNCALKTLGLLDEIIYVSKTEHGTEKVEVEPLQLIQVFEVVENLTYMQAANRGIG HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHCCCCC LQISPPKPDIYVLADRSRLKQVLLSLIDTAIRQMNEGNVNVSVHPAWESGYVHIWIDDQR EEECCCCCCEEEEECHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEEECCCC PVSAWSESWDLLKYNFEENAEKNMSADFQLSPGMRLLMNQTLLGMMNGRLEVLTTPCDGE CHHHHHCCCCCEEECCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHCCCEEEEECCCCCC ESNFNRTQCSIPMSIKGTKG CCCCCCEEEECCEEECCCCC >Mature Secondary Structure MFKQLKNTQLAYQMASEMSKFKAGFLARTAHELRSPINSMISGLQLIISDLADNPEEERQ CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH FVNEAYNCALKTLGLLDEIIYVSKTEHGTEKVEVEPLQLIQVFEVVENLTYMQAANRGIG HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHCCCCC LQISPPKPDIYVLADRSRLKQVLLSLIDTAIRQMNEGNVNVSVHPAWESGYVHIWIDDQR EEECCCCCCEEEEECHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEEECCCC PVSAWSESWDLLKYNFEENAEKNMSADFQLSPGMRLLMNQTLLGMMNGRLEVLTTPCDGE CHHHHHCCCCCEEECCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHCCCEEEEECCCCCC ESNFNRTQCSIPMSIKGTKG CCCCCCEEEECCEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 1791760; 12910271 [H]