Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475253

Identifier: 113475253

GI number: 113475253

Start: 2384111

End: 2385001

Strand: Direct

Name: 113475253

Synonym: Tery_1561

Alternate gene names: NA

Gene position: 2384111-2385001 (Clockwise)

Preceding gene: 113475251

Following gene: 113475254

Centisome position: 30.76

GC content: 32.1

Gene sequence:

>891_bases
ATGACAAAATTTTATATTTGGAAAGGAAATCGTTGTACTTATGAATTATATCCGCAAAAAGAGGATGTTACTACTAGGGC
ATCTTTGCTATTAATACATCCAGTTGGTGTTGGTTTATCTAAATATTTTTGGCATAGATTTTGTTCTCTATGGCAGTCAG
AAAATTTACCAAATTCTATTTATAATCCAGATTTATTAGGGTGTGGTGAAAGTTATATGCCATCAGTGGCATATTACCCT
GTAGACTGGGCTGAACAATTACAATATTTTTTAGAGACAATTGTGCAAAAACCAGTAATTTTAGTTGTGCAAGGTGCTTT
ATTTCCTGTTGCTATATCTCTAGTCAAACTACAACAAAAATCAAGTTTAATTTCTGGTTTAATTTTATCTGGACCCCCTC
CACTTGAGTTGATGCAAAAGGCTGGTTCACCCATCCAAAAAAAATTAATATGGAATCTTTTTAATTCCCCAGTTGGTAAT
GCATTTTATGGTTATGCACGCAGGAGAAAATTTTTAGAATCTTTTTCAAAAAAACAACTATTTGCTAATGCAAATAAAGT
TGATAAAGAATGGTTAGATACTTTAGAAAAAGGGGCAAAAAATCCCCAAAGTAAATATGCAGTTTTTTCTTTTTTAGCAG
GTTTTTGGAGACAGGATTTTAGTCAGGCGATCTCTGAAATTAATCAGCCTACTTTAGTATTAGTAGGGAGTCAAGCATCA
ACTATTAGTAAAACAGATACAATTGAAACTCCAGAACAAAGAATAAACACTTATTTAAAATATTTGCCTCAAGCAAAAGG
TAATCAAATATCAGGGCGAAATGTCTTGCCTTATGAGTCAACGGCAGAATTTGTTAAAGCTGTCAGTGAGTTTTTATTAA
CAATTAATTAG

Upstream 100 bases:

>100_bases
TAACTGGTTTTGAGCACTTTGAATTTACATTGCTATTCTAGGAATAATTAAACCTACCGACTTACGAATATATGTAATAA
ATGTTTCTCTTATTGAACTT

Downstream 100 bases:

>100_bases
CTATCAGTTTTGAGTATTTCTCTACCAAGATGCTACCCATTCATTCTTCCCCAGGGTTTCATATTGGCGACAGCCGAAAA
CCTAAACAGCCAGACTCCGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 296; Mature: 295

Protein sequence:

>296_residues
MTKFYIWKGNRCTYELYPQKEDVTTRASLLLIHPVGVGLSKYFWHRFCSLWQSENLPNSIYNPDLLGCGESYMPSVAYYP
VDWAEQLQYFLETIVQKPVILVVQGALFPVAISLVKLQQKSSLISGLILSGPPPLELMQKAGSPIQKKLIWNLFNSPVGN
AFYGYARRRKFLESFSKKQLFANANKVDKEWLDTLEKGAKNPQSKYAVFSFLAGFWRQDFSQAISEINQPTLVLVGSQAS
TISKTDTIETPEQRINTYLKYLPQAKGNQISGRNVLPYESTAEFVKAVSEFLLTIN

Sequences:

>Translated_296_residues
MTKFYIWKGNRCTYELYPQKEDVTTRASLLLIHPVGVGLSKYFWHRFCSLWQSENLPNSIYNPDLLGCGESYMPSVAYYP
VDWAEQLQYFLETIVQKPVILVVQGALFPVAISLVKLQQKSSLISGLILSGPPPLELMQKAGSPIQKKLIWNLFNSPVGN
AFYGYARRRKFLESFSKKQLFANANKVDKEWLDTLEKGAKNPQSKYAVFSFLAGFWRQDFSQAISEINQPTLVLVGSQAS
TISKTDTIETPEQRINTYLKYLPQAKGNQISGRNVLPYESTAEFVKAVSEFLLTIN
>Mature_295_residues
TKFYIWKGNRCTYELYPQKEDVTTRASLLLIHPVGVGLSKYFWHRFCSLWQSENLPNSIYNPDLLGCGESYMPSVAYYPV
DWAEQLQYFLETIVQKPVILVVQGALFPVAISLVKLQQKSSLISGLILSGPPPLELMQKAGSPIQKKLIWNLFNSPVGNA
FYGYARRRKFLESFSKKQLFANANKVDKEWLDTLEKGAKNPQSKYAVFSFLAGFWRQDFSQAISEINQPTLVLVGSQAST
ISKTDTIETPEQRINTYLKYLPQAKGNQISGRNVLPYESTAEFVKAVSEFLLTIN

Specific function: Unknown

COG id: COG0596

COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33619; Mature: 33488

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKFYIWKGNRCTYELYPQKEDVTTRASLLLIHPVGVGLSKYFWHRFCSLWQSENLPNSI
CCEEEEEECCEEEEEECCCCCCHHHHHHEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCC
YNPDLLGCGESYMPSVAYYPVDWAEQLQYFLETIVQKPVILVVQGALFPVAISLVKLQQK
CCCCCCCCCHHHCCCCEECCCCHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHH
SSLISGLILSGPPPLELMQKAGSPIQKKLIWNLFNSPVGNAFYGYARRRKFLESFSKKQL
HHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
FANANKVDKEWLDTLEKGAKNPQSKYAVFSFLAGFWRQDFSQAISEINQPTLVLVGSQAS
HHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCC
TISKTDTIETPEQRINTYLKYLPQAKGNQISGRNVLPYESTAEFVKAVSEFLLTIN
CCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TKFYIWKGNRCTYELYPQKEDVTTRASLLLIHPVGVGLSKYFWHRFCSLWQSENLPNSI
CEEEEEECCEEEEEECCCCCCHHHHHHEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCC
YNPDLLGCGESYMPSVAYYPVDWAEQLQYFLETIVQKPVILVVQGALFPVAISLVKLQQK
CCCCCCCCCHHHCCCCEECCCCHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHH
SSLISGLILSGPPPLELMQKAGSPIQKKLIWNLFNSPVGNAFYGYARRRKFLESFSKKQL
HHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
FANANKVDKEWLDTLEKGAKNPQSKYAVFSFLAGFWRQDFSQAISEINQPTLVLVGSQAS
HHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCC
TISKTDTIETPEQRINTYLKYLPQAKGNQISGRNVLPYESTAEFVKAVSEFLLTIN
CCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA