Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475228

Identifier: 113475228

GI number: 113475228

Start: 2329093

End: 2329341

Strand: Direct

Name: 113475228

Synonym: Tery_1535

Alternate gene names: NA

Gene position: 2329093-2329341 (Clockwise)

Preceding gene: 113475227

Following gene: 113475230

Centisome position: 30.05

GC content: 40.96

Gene sequence:

>249_bases
GTGCAGTTGGTGGGTATTCATCTGGGTAGGTTGAGGAGGGTTGATGGATATGGGAAGGAGGTTTTGATTTTGACTTTTTT
GAGAGTTGTATCACCGGAGGTTGGGGAAATATTGGTAAGGCCAACTGCTGTTGTGACTAAAGAAAACCTGAGGATGACAA
ATTCTGATAATGTTGTTTTATCTGAAAGCCAAGATCTTGAAACAATACCTGGGCAATACCTCTATCTATGGTCTATAGCA
TTTCTCTAG

Upstream 100 bases:

>100_bases
AGACGTCAAAAGAGAGATAAAAGCGGCCCTTAAAGTGGTGTTTGAAGAGAAATTTTCCTCTATTATTATTTAAATCTTTC
CTTTTTTACTTGATGAGGCG

Downstream 100 bases:

>100_bases
ATATTGTTACTATTGGCTAGTGTTGATTACATATTGCGCATTGTTTAGCATTAGCGAGCTGTTTACCTTGAGAAGATAAA
TTTGAGAATGTCTCAAAAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 82; Mature: 82

Protein sequence:

>82_residues
MQLVGIHLGRLRRVDGYGKEVLILTFLRVVSPEVGEILVRPTAVVTKENLRMTNSDNVVLSESQDLETIPGQYLYLWSIA
FL

Sequences:

>Translated_82_residues
MQLVGIHLGRLRRVDGYGKEVLILTFLRVVSPEVGEILVRPTAVVTKENLRMTNSDNVVLSESQDLETIPGQYLYLWSIA
FL
>Mature_82_residues
MQLVGIHLGRLRRVDGYGKEVLILTFLRVVSPEVGEILVRPTAVVTKENLRMTNSDNVVLSESQDLETIPGQYLYLWSIA
FL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9272; Mature: 9272

Theoretical pI: Translated: 5.79; Mature: 5.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLVGIHLGRLRRVDGYGKEVLILTFLRVVSPEVGEILVRPTAVVTKENLRMTNSDNVVL
CEEECCCCCCEEECCCCCCHHHHHHHHHHHCCCCCCEEECCCEEEEECCEEEECCCCEEE
SESQDLETIPGQYLYLWSIAFL
ECCCCCCCCCCCEEEEEEEECC
>Mature Secondary Structure
MQLVGIHLGRLRRVDGYGKEVLILTFLRVVSPEVGEILVRPTAVVTKENLRMTNSDNVVL
CEEECCCCCCEEECCCCCCHHHHHHHHHHHCCCCCCEEECCCEEEEECCEEEECCCCEEE
SESQDLETIPGQYLYLWSIAFL
ECCCCCCCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA