| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113475213
Identifier: 113475213
GI number: 113475213
Start: 2304394
End: 2305170
Strand: Direct
Name: 113475213
Synonym: Tery_1516
Alternate gene names: NA
Gene position: 2304394-2305170 (Clockwise)
Preceding gene: 113475210
Following gene: 113475214
Centisome position: 29.73
GC content: 34.75
Gene sequence:
>777_bases ATGGCTAATAATAAAACTGGTATTGAATGGACGGACAGGACTTGGAATCCTACCACAGGTTGTGATAAAGTTAGTCCTGG TTGTGCTCATTGTTATGCAGAAGCAATTACAAAACGTTTTACTAATAATTTTCCTGAAGGGTTTACTTTGAAACTGCATC CTGAGCGTTTAAAGCAACCATTAAGTTGGCGTACTCCTAAGCGAGTTTTTGTTAATTCAATGAGCGATATTTTCCATGAA GATGTTGATCTTGATTTTATCAAACAAGTATTTAAAATAATTGGCAAAACCCCTTGGCATATTTATCAAGTTTTGACGAA AAGACATGAACGTTTGGTTGAACTAGCACCTCAATTAGAATGGCATGAAAATATTTGGATGGGTGTATCGGTGGAAAGTC AAAATTATGTTCATCGTGTTGATTATTTACGGCAAGTACCTGCTAATGTGAGATTCCTTTCTTGTGAACCCCTTTTAGGG GATTTACAACTTAATTTAATTGATATTAATTGGGTAATTGTAGGTGGTGAATCTGGTAATAAATATCGTCCGATGAAAGA GGAATGGGTAAAAGGTATTTATGAACAATGTCAAGCTGCTGATGTAGCTTTTTTCTTTAAACAATGGGGAGGTAGAACTC CTAAAACTTTAGGCAGAATTTTTAATGGAAAAGTTTGGGATGAAATGCCAGAAGTGTGGAATAAATATCAAAAAAAATGG AGGGGGTGCAAGGTAGAATATAAGGGTAAATCTAGAAAAGAAAAGATTTATGTTTAG
Upstream 100 bases:
>100_bases TGACTGTAAAAATAAGGTATAATTTAGTAAGTAATAAAAAAATATTTAATCAAATAATATAATTCAATAATTATAATTTT TTGAGAAATTAAATTTAACT
Downstream 100 bases:
>100_bases GGGAATATAACTTCTACTTTGTCTCCAAATGTATCTTTTTTACGCTTAGATGGGTTTGTAATAATTTTTCCTTCAGCTTC CAATTTTAGTAGGGTATCTT
Product: phage Gp37Gp68
Products: NA
Alternate protein names: Phage /Gp; Bacteriophage Protein Gp; Gp37gp68 Family Protein; ABC Transporter Subunit; Phage ; ABC Transporter; Bacteriophage Protein; Phage Protein Gp; Radical SAM Domain-Containing Protein; Phage Protein; Phage Gp; Claudin Tight Junction Protein
Number of amino acids: Translated: 258; Mature: 257
Protein sequence:
>258_residues MANNKTGIEWTDRTWNPTTGCDKVSPGCAHCYAEAITKRFTNNFPEGFTLKLHPERLKQPLSWRTPKRVFVNSMSDIFHE DVDLDFIKQVFKIIGKTPWHIYQVLTKRHERLVELAPQLEWHENIWMGVSVESQNYVHRVDYLRQVPANVRFLSCEPLLG DLQLNLIDINWVIVGGESGNKYRPMKEEWVKGIYEQCQAADVAFFFKQWGGRTPKTLGRIFNGKVWDEMPEVWNKYQKKW RGCKVEYKGKSRKEKIYV
Sequences:
>Translated_258_residues MANNKTGIEWTDRTWNPTTGCDKVSPGCAHCYAEAITKRFTNNFPEGFTLKLHPERLKQPLSWRTPKRVFVNSMSDIFHE DVDLDFIKQVFKIIGKTPWHIYQVLTKRHERLVELAPQLEWHENIWMGVSVESQNYVHRVDYLRQVPANVRFLSCEPLLG DLQLNLIDINWVIVGGESGNKYRPMKEEWVKGIYEQCQAADVAFFFKQWGGRTPKTLGRIFNGKVWDEMPEVWNKYQKKW RGCKVEYKGKSRKEKIYV >Mature_257_residues ANNKTGIEWTDRTWNPTTGCDKVSPGCAHCYAEAITKRFTNNFPEGFTLKLHPERLKQPLSWRTPKRVFVNSMSDIFHED VDLDFIKQVFKIIGKTPWHIYQVLTKRHERLVELAPQLEWHENIWMGVSVESQNYVHRVDYLRQVPANVRFLSCEPLLGD LQLNLIDINWVIVGGESGNKYRPMKEEWVKGIYEQCQAADVAFFFKQWGGRTPKTLGRIFNGKVWDEMPEVWNKYQKKWR GCKVEYKGKSRKEKIYV
Specific function: Unknown
COG id: COG4422
COG function: function code S; Bacteriophage protein gp37
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30427; Mature: 30296
Theoretical pI: Translated: 9.46; Mature: 9.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANNKTGIEWTDRTWNPTTGCDKVSPGCAHCYAEAITKRFTNNFPEGFTLKLHPERLKQP CCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEECHHHHCCC LSWRTPKRVFVNSMSDIFHEDVDLDFIKQVFKIIGKTPWHIYQVLTKRHERLVELAPQLE CCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCC WHENIWMGVSVESQNYVHRVDYLRQVPANVRFLSCEPLLGDLQLNLIDINWVIVGGESGN CCCCEEEEEEECCCHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEEEEEEEEEEECCCCC KYRPMKEEWVKGIYEQCQAADVAFFFKQWGGRTPKTLGRIFNGKVWDEMPEVWNKYQKKW CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHH RGCKVEYKGKSRKEKIYV CCCEEEECCCCCCCCCCC >Mature Secondary Structure ANNKTGIEWTDRTWNPTTGCDKVSPGCAHCYAEAITKRFTNNFPEGFTLKLHPERLKQP CCCCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEECHHHHCCC LSWRTPKRVFVNSMSDIFHEDVDLDFIKQVFKIIGKTPWHIYQVLTKRHERLVELAPQLE CCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCC WHENIWMGVSVESQNYVHRVDYLRQVPANVRFLSCEPLLGDLQLNLIDINWVIVGGESGN CCCCEEEEEEECCCHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEEEEEEEEEEECCCCC KYRPMKEEWVKGIYEQCQAADVAFFFKQWGGRTPKTLGRIFNGKVWDEMPEVWNKYQKKW CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHH RGCKVEYKGKSRKEKIYV CCCEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA