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The map label for this gene is ydiU [C]

Identifier: 113475177

GI number: 113475177

Start: 2239624

End: 2241048

Strand: Direct

Name: ydiU [C]

Synonym: Tery_1476

Alternate gene names: 113475177

Gene position: 2239624-2241048 (Clockwise)

Preceding gene: 113475176

Following gene: 113475178

Centisome position: 28.9

GC content: 35.65

Gene sequence:

>1425_bases
ATGTCTAATCCTTTACTTTCTCTCAACTATGAACCTGCCATTCAAGCTTTAGGCGGTGACTATTATGATGAGGTACTTTC
TGCTGAATTTCCACAACATATTTTGCGATTTCGTAATGATCAATTACTCCCTAAAATAGGACTAAATTCTCAAGATGTTA
AGGATGAGCATTTTATTGAAGCTTTTGGTAAGTTTCATTGTGTTAGGCCTTTTTTAGCTCTACGTTATCACGGTTATCAA
TTTGGTGAATATAACCCTTACTTGGGAGATGGTAGGGGTTTTCTTTATGGTCAAGTGCGTGGGGTAGACGATGAATTATA
TGATTTTGGTACTAAGGGTTCGGGTAGAACCCCTTATTCTCGCAGTGCTGATGGTAGACTTACTCTCAAAGGAGGGGTAC
GCGAGGTTTTAGCTGCTGAAATTTTGCACCGTCATGGGGTTCGTACTTCTCGATGTCTAAGTTTGATTGAAACTGGGGAA
GGGTTATGGCGTGGGGATGAACCTTCTCCTACTCGCTCGTCGGTGATGGTGCGTTTTAGTCGTTCTCATATTCGCTTTGG
AACTTTTGAAAGACTTCATTTTTATAAGCGCCCAGATTTAACGAAAAAACTATTAAACCATGTAATTAATTGTTATTATT
CTAATCTGAAAAAAGAGAATATTTCCCAAAAGGATCCGTTTCAAGATTGCTATTTTTTATTCTACTTAGAATTAGTAAAA
AGAATTGCAAAATTAGTTGCTCAATGGATGGCTGCTGGATTTTGTCATGGTGTATTAAATACAGATAATATGTCAATTAC
TGGAGAAAGTTTTGATTATGGTCCATACTCTTTTATTCCCACATATAATCCTAAATTTACAGCAGCTTATTTTGATTATT
CTGGTCTTTATCGTTATAGTCATCAACCATTAGTTTGTAAGTCAAATTTACAACTACTTCAAGAAGCATTAGCTGCAGTT
ATTGACCGGAAGAATATGAGGTCAGCCTTAGAAAAATTTGATGATTTTTATCTACATGAATATCGACAATTAATGATGAG
GAGACTAGGGTTTAAAAAGTTAGCTGAAGCCGATGCAGATAAGTTACTTCAGCTAACCATAAAAATGCTCACAGACTCTC
AGGTTGGATACCACGATTTCTTTTTGGAATTAAGACAAAAATTTTCTCCCGAATGGCGTGATGATATTAGTCAGATTTTT
GCTGATTTTGAACAGCCAGAATTAATTGATCCGTGGCGACAATATTATTATCATCTTTTGCAGACTTATTCTGATAATGA
ATTAGAGGAAATGACGGAAAGGTTACAACAATATAATCCACAACAAAGTTTAATTAGACCTGTCATTGAGTCAGTCTGGG
AAGCAATTACACTAGAGGATAATTGGCAGCCATTTTATGATTTATTACAGCAAATATATGATTGA

Upstream 100 bases:

>100_bases
GTTAAAAGTATTAAAAATATTGTATTATTACATCTTTTCACTTTCTTTTTTTAACTTTTAACTTTTAACTTTTAACTTTT
AACTTTTGACCTATAAAATA

Downstream 100 bases:

>100_bases
ATAAAGAAGAAGTAAAGAGGAAGAAGGAAGAACTAGTAAATTTTGAAAAAAAGGGAAAAATAATAGATATCTTATTAATT
AGCCATAATAAAAATGCTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 474; Mature: 473

Protein sequence:

>474_residues
MSNPLLSLNYEPAIQALGGDYYDEVLSAEFPQHILRFRNDQLLPKIGLNSQDVKDEHFIEAFGKFHCVRPFLALRYHGYQ
FGEYNPYLGDGRGFLYGQVRGVDDELYDFGTKGSGRTPYSRSADGRLTLKGGVREVLAAEILHRHGVRTSRCLSLIETGE
GLWRGDEPSPTRSSVMVRFSRSHIRFGTFERLHFYKRPDLTKKLLNHVINCYYSNLKKENISQKDPFQDCYFLFYLELVK
RIAKLVAQWMAAGFCHGVLNTDNMSITGESFDYGPYSFIPTYNPKFTAAYFDYSGLYRYSHQPLVCKSNLQLLQEALAAV
IDRKNMRSALEKFDDFYLHEYRQLMMRRLGFKKLAEADADKLLQLTIKMLTDSQVGYHDFFLELRQKFSPEWRDDISQIF
ADFEQPELIDPWRQYYYHLLQTYSDNELEEMTERLQQYNPQQSLIRPVIESVWEAITLEDNWQPFYDLLQQIYD

Sequences:

>Translated_474_residues
MSNPLLSLNYEPAIQALGGDYYDEVLSAEFPQHILRFRNDQLLPKIGLNSQDVKDEHFIEAFGKFHCVRPFLALRYHGYQ
FGEYNPYLGDGRGFLYGQVRGVDDELYDFGTKGSGRTPYSRSADGRLTLKGGVREVLAAEILHRHGVRTSRCLSLIETGE
GLWRGDEPSPTRSSVMVRFSRSHIRFGTFERLHFYKRPDLTKKLLNHVINCYYSNLKKENISQKDPFQDCYFLFYLELVK
RIAKLVAQWMAAGFCHGVLNTDNMSITGESFDYGPYSFIPTYNPKFTAAYFDYSGLYRYSHQPLVCKSNLQLLQEALAAV
IDRKNMRSALEKFDDFYLHEYRQLMMRRLGFKKLAEADADKLLQLTIKMLTDSQVGYHDFFLELRQKFSPEWRDDISQIF
ADFEQPELIDPWRQYYYHLLQTYSDNELEEMTERLQQYNPQQSLIRPVIESVWEAITLEDNWQPFYDLLQQIYD
>Mature_473_residues
SNPLLSLNYEPAIQALGGDYYDEVLSAEFPQHILRFRNDQLLPKIGLNSQDVKDEHFIEAFGKFHCVRPFLALRYHGYQF
GEYNPYLGDGRGFLYGQVRGVDDELYDFGTKGSGRTPYSRSADGRLTLKGGVREVLAAEILHRHGVRTSRCLSLIETGEG
LWRGDEPSPTRSSVMVRFSRSHIRFGTFERLHFYKRPDLTKKLLNHVINCYYSNLKKENISQKDPFQDCYFLFYLELVKR
IAKLVAQWMAAGFCHGVLNTDNMSITGESFDYGPYSFIPTYNPKFTAAYFDYSGLYRYSHQPLVCKSNLQLLQEALAAVI
DRKNMRSALEKFDDFYLHEYRQLMMRRLGFKKLAEADADKLLQLTIKMLTDSQVGYHDFFLELRQKFSPEWRDDISQIFA
DFEQPELIDPWRQYYYHLLQTYSDNELEEMTERLQQYNPQQSLIRPVIESVWEAITLEDNWQPFYDLLQQIYD

Specific function: Unknown

COG id: COG0397

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0061 (SELO) family

Homologues:

Organism=Homo sapiens, GI32880229, Length=381, Percent_Identity=33.5958005249344, Blast_Score=183, Evalue=4e-46,
Organism=Escherichia coli, GI1787999, Length=374, Percent_Identity=33.6898395721925, Blast_Score=204, Evalue=1e-53,
Organism=Saccharomyces cerevisiae, GI6325034, Length=422, Percent_Identity=27.0142180094787, Blast_Score=137, Evalue=3e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1476_TRIEI (Q115Q9)

Other databases:

- EMBL:   CP000393
- RefSeq:   YP_721238.1
- STRING:   Q115Q9
- GeneID:   4241682
- GenomeReviews:   CP000393_GR
- KEGG:   ter:Tery_1476
- NMPDR:   fig|203124.1.peg.1310
- eggNOG:   COG0397
- HOGENOM:   HBG683993
- OMA:   FDYGGRY
- PhylomeDB:   Q115Q9
- ProtClustDB:   PRK00029
- BioCyc:   TERY203124:TERY_1476-MONOMER
- HAMAP:   MF_00692
- InterPro:   IPR003846

Pfam domain/function: PF02696 UPF0061

EC number: NA

Molecular weight: Translated: 55678; Mature: 55547

Theoretical pI: Translated: 6.28; Mature: 6.28

Prosite motif: PS00616 HIS_ACID_PHOSPHAT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNPLLSLNYEPAIQALGGDYYDEVLSAEFPQHILRFRNDQLLPKIGLNSQDVKDEHFIE
CCCCCEECCCCHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHH
AFGKFHCVRPFLALRYHGYQFGEYNPYLGDGRGFLYGQVRGVDDELYDFGTKGSGRTPYS
HHHHHHHHHHHHHHHHCCEECCCCCCCCCCCCEEEEEEEECCCHHHHHCCCCCCCCCCCC
RSADGRLTLKGGVREVLAAEILHRHGVRTSRCLSLIETGEGLWRGDEPSPTRSSVMVRFS
CCCCCEEEECCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHEEEH
RSHIRFGTFERLHFYKRPDLTKKLLNHVINCYYSNLKKENISQKDPFQDCYFLFYLELVK
HCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
RIAKLVAQWMAAGFCHGVLNTDNMSITGESFDYGPYSFIPTYNPKFTAAYFDYSGLYRYS
HHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCEEEEEECCCCHHHCC
HQPLVCKSNLQLLQEALAAVIDRKNMRSALEKFDDFYLHEYRQLMMRRLGFKKLAEADAD
CCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
KLLQLTIKMLTDSQVGYHDFFLELRQKFSPEWRDDISQIFADFEQPELIDPWRQYYYHLL
HHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
QTYSDNELEEMTERLQQYNPQQSLIRPVIESVWEAITLEDNWQPFYDLLQQIYD
HHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCC
>Mature Secondary Structure 
SNPLLSLNYEPAIQALGGDYYDEVLSAEFPQHILRFRNDQLLPKIGLNSQDVKDEHFIE
CCCCEECCCCHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHH
AFGKFHCVRPFLALRYHGYQFGEYNPYLGDGRGFLYGQVRGVDDELYDFGTKGSGRTPYS
HHHHHHHHHHHHHHHHCCEECCCCCCCCCCCCEEEEEEEECCCHHHHHCCCCCCCCCCCC
RSADGRLTLKGGVREVLAAEILHRHGVRTSRCLSLIETGEGLWRGDEPSPTRSSVMVRFS
CCCCCEEEECCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHEEEH
RSHIRFGTFERLHFYKRPDLTKKLLNHVINCYYSNLKKENISQKDPFQDCYFLFYLELVK
HCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
RIAKLVAQWMAAGFCHGVLNTDNMSITGESFDYGPYSFIPTYNPKFTAAYFDYSGLYRYS
HHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCEEEEEECCCCHHHCC
HQPLVCKSNLQLLQEALAAVIDRKNMRSALEKFDDFYLHEYRQLMMRRLGFKKLAEADAD
CCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
KLLQLTIKMLTDSQVGYHDFFLELRQKFSPEWRDDISQIFADFEQPELIDPWRQYYYHLL
HHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
QTYSDNELEEMTERLQQYNPQQSLIRPVIESVWEAITLEDNWQPFYDLLQQIYD
HHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA