| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
Click here to switch to the map view.
The map label for this gene is 113475150
Identifier: 113475150
GI number: 113475150
Start: 2184008
End: 2184361
Strand: Reverse
Name: 113475150
Synonym: Tery_1446
Alternate gene names: NA
Gene position: 2184361-2184008 (Counterclockwise)
Preceding gene: 113475151
Following gene: 113475149
Centisome position: 28.18
GC content: 25.99
Gene sequence:
>354_bases ATGGTAATTGCTTATTCTACAGAATATTATGGCAAATTAGATATTCATCTTTCTCCTTTTAATGTTGGTTTACCTATAGA ATTAAAAGAATTTATACCAGAGCAAGTCACTAAGTTAGCAGATTTATATAAATTACCAATAACAGTAGTAGTTTCTTTGA TGTCTATAATAAGAGGTCATCCCTATTTAATCAGATTAGAATTGTATAAAATGTTGGAGGATGAATTAACAATTGAAGAG CTATTAAAATATACTACTACTACTGAAAGTGGAATCTATCAACAACATTTAAGTGCACATTTAAAAATTTGTCTAATCAG AAAAATATTAAAGCAGTTTTTAGTCAAATATTAA
Upstream 100 bases:
>100_bases TAAAATTTTTAACTATCCAGAAATATCTAGAGACTTTTTTCTCATATTAAAAAGTTGGTATGAGGCGAGCAACCATAAAG AAATTTTGGAAAATTTACGA
Downstream 100 bases:
>100_bases AAGCTATTTCACCTTTAAGTTTACCAAATAAAAATATTGAATTACATCAATTAGAAGCTATAAAATTAATTACAATGGTT AGTTTTTGTTTTTTTGGAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 117; Mature: 117
Protein sequence:
>117_residues MVIAYSTEYYGKLDIHLSPFNVGLPIELKEFIPEQVTKLADLYKLPITVVVSLMSIIRGHPYLIRLELYKMLEDELTIEE LLKYTTTTESGIYQQHLSAHLKICLIRKILKQFLVKY
Sequences:
>Translated_117_residues MVIAYSTEYYGKLDIHLSPFNVGLPIELKEFIPEQVTKLADLYKLPITVVVSLMSIIRGHPYLIRLELYKMLEDELTIEE LLKYTTTTESGIYQQHLSAHLKICLIRKILKQFLVKY >Mature_117_residues MVIAYSTEYYGKLDIHLSPFNVGLPIELKEFIPEQVTKLADLYKLPITVVVSLMSIIRGHPYLIRLELYKMLEDELTIEE LLKYTTTTESGIYQQHLSAHLKICLIRKILKQFLVKY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13674; Mature: 13674
Theoretical pI: Translated: 7.65; Mature: 7.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVIAYSTEYYGKLDIHLSPFNVGLPIELKEFIPEQVTKLADLYKLPITVVVSLMSIIRGH CEEEECCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PYLIRLELYKMLEDELTIEELLKYTTTTESGIYQQHLSAHLKICLIRKILKQFLVKY CEEEHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MVIAYSTEYYGKLDIHLSPFNVGLPIELKEFIPEQVTKLADLYKLPITVVVSLMSIIRGH CEEEECCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PYLIRLELYKMLEDELTIEELLKYTTTTESGIYQQHLSAHLKICLIRKILKQFLVKY CEEEHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA