| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113475139
Identifier: 113475139
GI number: 113475139
Start: 2165108
End: 2166181
Strand: Reverse
Name: 113475139
Synonym: Tery_1431
Alternate gene names: NA
Gene position: 2166181-2165108 (Counterclockwise)
Preceding gene: 113475140
Following gene: 113475138
Centisome position: 27.95
GC content: 27.0
Gene sequence:
>1074_bases ATGTTCAAGTTGAGTATTGATGAAAAAATTAAGTTAGAGGAAATTTTAACTGACTATTTTAATGGGCTAGAAAAACCTAG CGAAGGTTTAAAAGCAATGATAAATATTAGTGAGGTACAAATTGATATAACGACAATAGATTACAAGTTACCTGTGAAAG AGTTAGTCACTAATTTTTATAGCTTAATTTTAAAGAAACCAGAAGATTTAGAATCTTTTTTGATATATTTGCAAAATAAA TTAGATCCAGATGAAAGATTGACTATCAAAGGATATATTGAAAAACTTAAGCCCAAGCGATCGCGAATAAACCAAATTCC TGATCATCGTTCACGTATGTCTAAAAAAAGGCAACAAAACCATGAAATACCGACATCTAAAACACCTATCAAAATAAAAG ATAATAATAAAGATAATAATAAAGATAACAATATAATTGTTAAATATGATTTAGATGAGTTAGTCTACAAATTTAGAAAA GCATTAGATTATCAAGGAGTTTTTGCTTTTAGTCTTGGGGAAGAGTACACAATTTTAAAGAATTATATTATTGAGAGAAT TCTCCACGAATTACAGGAGAAAACTCAACGTGATTATTGGTCTCGTGAGATTAGATTGAGTCGGAATTTAAAATCAATTG ATGATGACTTAAAAAATAACAACATAAATCAAATAACTGATTTATTAGCTGAGACTGATCCTTTAGATGTTGTATTAATA ATTTGGAATTACAATATCAATAAAAAAAATTTAAATTCGATGACAGATATTTTTTTATCAGAAATAAAAACGAAATGTAA TTGCTATTTAGAAAATAAAAGTCGCTGTTTAATTATTATTTTTGCTAATGTTAAGATAAAACAATCTATTCAGGGTTGTA TTAACCTGAGCATACCTAAATCATTTCAAATTAATGAATTATGTGACTGGTTTAGGGGTTATCTTCAAAAATTACAGATA CAAGATGATATGATAAATACATGCCTTAGAAAGTTAAGAAATGCTGATGGTCATTTGCTTTCTACTTATAATACTCTTGA AGGAATTATTGACGAACTACGAGCAATTAATTGA
Upstream 100 bases:
>100_bases GTTAATAAAATCATTGCAATGATTCGGTAATGATGGGGATATTTACCACTCTATATCAATAGTAAATTATAGTTAAAGTA AAACCGGTATAAGCTGATTT
Downstream 100 bases:
>100_bases AAAAATATTGAAAAAATGAACGACTTAGCAAATAGACAATATGAAGGTCAAGGTAATGACCAAAAGTATGAACGATTAAA AGACGAAAAGGGGAAAGAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 357; Mature: 357
Protein sequence:
>357_residues MFKLSIDEKIKLEEILTDYFNGLEKPSEGLKAMINISEVQIDITTIDYKLPVKELVTNFYSLILKKPEDLESFLIYLQNK LDPDERLTIKGYIEKLKPKRSRINQIPDHRSRMSKKRQQNHEIPTSKTPIKIKDNNKDNNKDNNIIVKYDLDELVYKFRK ALDYQGVFAFSLGEEYTILKNYIIERILHELQEKTQRDYWSREIRLSRNLKSIDDDLKNNNINQITDLLAETDPLDVVLI IWNYNINKKNLNSMTDIFLSEIKTKCNCYLENKSRCLIIIFANVKIKQSIQGCINLSIPKSFQINELCDWFRGYLQKLQI QDDMINTCLRKLRNADGHLLSTYNTLEGIIDELRAIN
Sequences:
>Translated_357_residues MFKLSIDEKIKLEEILTDYFNGLEKPSEGLKAMINISEVQIDITTIDYKLPVKELVTNFYSLILKKPEDLESFLIYLQNK LDPDERLTIKGYIEKLKPKRSRINQIPDHRSRMSKKRQQNHEIPTSKTPIKIKDNNKDNNKDNNIIVKYDLDELVYKFRK ALDYQGVFAFSLGEEYTILKNYIIERILHELQEKTQRDYWSREIRLSRNLKSIDDDLKNNNINQITDLLAETDPLDVVLI IWNYNINKKNLNSMTDIFLSEIKTKCNCYLENKSRCLIIIFANVKIKQSIQGCINLSIPKSFQINELCDWFRGYLQKLQI QDDMINTCLRKLRNADGHLLSTYNTLEGIIDELRAIN >Mature_357_residues MFKLSIDEKIKLEEILTDYFNGLEKPSEGLKAMINISEVQIDITTIDYKLPVKELVTNFYSLILKKPEDLESFLIYLQNK LDPDERLTIKGYIEKLKPKRSRINQIPDHRSRMSKKRQQNHEIPTSKTPIKIKDNNKDNNKDNNIIVKYDLDELVYKFRK ALDYQGVFAFSLGEEYTILKNYIIERILHELQEKTQRDYWSREIRLSRNLKSIDDDLKNNNINQITDLLAETDPLDVVLI IWNYNINKKNLNSMTDIFLSEIKTKCNCYLENKSRCLIIIFANVKIKQSIQGCINLSIPKSFQINELCDWFRGYLQKLQI QDDMINTCLRKLRNADGHLLSTYNTLEGIIDELRAIN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42093; Mature: 42093
Theoretical pI: Translated: 8.31; Mature: 8.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKLSIDEKIKLEEILTDYFNGLEKPSEGLKAMINISEVQIDITTIDYKLPVKELVTNFY CEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHEEEEEEEEEEEEEEEECCHHHHHHHHH SLILKKPEDLESFLIYLQNKLDPDERLTIKGYIEKLKPKRSRINQIPDHRSRMSKKRQQN HHHHCCCHHHHHHHHHHHHCCCCCCEEEHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHC HEIPTSKTPIKIKDNNKDNNKDNNIIVKYDLDELVYKFRKALDYQGVFAFSLGEEYTILK CCCCCCCCCEEEECCCCCCCCCCCEEEEECHHHHHHHHHHHCCCCCEEEEECCCCHHHHH NYIIERILHELQEKTQRDYWSREIRLSRNLKSIDDDLKNNNINQITDLLAETDPLDVVLI HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEE IWNYNINKKNLNSMTDIFLSEIKTKCNCYLENKSRCLIIIFANVKIKQSIQGCINLSIPK EEECCCCCCHHHHHHHHHHHHHHHHHEEEEECCCCEEEEEEECCCHHHHHHHHEECCCCC SFQINELCDWFRGYLQKLQIQDDMINTCLRKLRNADGHLLSTYNTLEGIIDELRAIN CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHCCC >Mature Secondary Structure MFKLSIDEKIKLEEILTDYFNGLEKPSEGLKAMINISEVQIDITTIDYKLPVKELVTNFY CEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHEEEEEEEEEEEEEEEECCHHHHHHHHH SLILKKPEDLESFLIYLQNKLDPDERLTIKGYIEKLKPKRSRINQIPDHRSRMSKKRQQN HHHHCCCHHHHHHHHHHHHCCCCCCEEEHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHC HEIPTSKTPIKIKDNNKDNNKDNNIIVKYDLDELVYKFRKALDYQGVFAFSLGEEYTILK CCCCCCCCCEEEECCCCCCCCCCCEEEEECHHHHHHHHHHHCCCCCEEEEECCCCHHHHH NYIIERILHELQEKTQRDYWSREIRLSRNLKSIDDDLKNNNINQITDLLAETDPLDVVLI HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEE IWNYNINKKNLNSMTDIFLSEIKTKCNCYLENKSRCLIIIFANVKIKQSIQGCINLSIPK EEECCCCCCHHHHHHHHHHHHHHHHHEEEEECCCCEEEEEEECCCHHHHHHHHEECCCCC SFQINELCDWFRGYLQKLQIQDDMINTCLRKLRNADGHLLSTYNTLEGIIDELRAIN CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA