| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113475095
Identifier: 113475095
GI number: 113475095
Start: 2104828
End: 2106021
Strand: Direct
Name: 113475095
Synonym: Tery_1372
Alternate gene names: NA
Gene position: 2104828-2106021 (Clockwise)
Preceding gene: 113475094
Following gene: 113475096
Centisome position: 27.16
GC content: 30.9
Gene sequence:
>1194_bases ATGTTCCAAAAATTTCTCTTAATAACAGTAATTTCTAACTTCATAATATGGATATACTTATTAATATTTCGCGGTAATTT TTGGCTGGCAAACCAACAACTATTATCAAAATCAAAAACAAAAATTGAGAATACGGAAAATTTGCCATCAATTTATGTGA TAATTCCTGCTAGAAATGAAGAAAAATTACTAAAAATTACCCTAAATTCTTTATTAAATCAAGATTATTCAGGGATATTA AAAATAATATTAGTAGATGATCACAGTAAAGATAATACAATCAATATAGCGAATTCTTTGGCTCAACAAGGTCATAATTC TACAAAGCTAGAAGTTATTTCAGCAGCAGATTTACCTAGTAATTGGACAGGAAAACTATGGGCAATTAATGAAGGAATTA ACTATGCAAAAAAACAAACTCCAGCCCCAGATTATTTTCTATTAACAGATGCAGATATTGAACATTTCCCTACTAATATT CGCCAACTTGTTGTCAAAGCAGAACAAGAAAATTTAGCCTTAGTTTCTTTAATGGTAAAACTACAATGCGAAACAATAGC CGAGAAATTAATGATTCCCGCATTTGTATTTTTCTTTCAAAAGTTATATCCATTTAAATGGGTAAATAATCCCCAAAATA CTACTGCAGCTGCTGCTGGAGGTTGCATATTAGTTCGTCATAAAAATTTAGATCAAGTTGGAGGAATAGAGGTTATTAAA AATGCTTTAATAGATGATTGTAATTTAGCTAAAATAGTTAAACAAAAATCCACAAATAAAAATATCTGGTTAGGGCTAAC TAATGATACGAAAAGCCGACGTTCTTATCCTGATTTAATGAGTATTTGGAATATGGTAGCTCGTACTGCTTTTACTCAGT TAAATTATTCTCCATTCTTGTTATTAGTAACAGTAATAGGAATGAAATTAGTTTATTTAATTCCCTCATTAGGAATAATT TTGGGAGTTATTTTTGGTTGGTGGCCAGTAGTAGTGATCGCGATCTTAGCAAGATTATTAATATTTTTAGCTTACTTACC TATTATTAGATTTTATGGACTTTCACCAATATATGCCATGAGCTTACCCACTGTTGCTTTGATTTATATATTAATCACAA TAGATTCAGCTTGGCGACACTGGCGAGGGCGAGGCGGTTATTGGAAAGGACGAGTTAATACCAGTATATTCTGA
Upstream 100 bases:
>100_bases ACAATAAACCATGATTTATTGATAATTACAACCGGTTTATTAACAATGTATATTTGCCCTGCATAAATGCATTTATCTAT TGTAAAATTATGTTTTTTTT
Downstream 100 bases:
>100_bases ATAAATTCTATTAAATATAGTGGTATAGGTATAAATAAATTTTAGCAACTAAGTTTATATTATAAAGTCTACTATACTGA CATTGGTCCTTAATGAAAAG
Product: glycosyl transferase family protein
Products: NA
Alternate protein names: Glycosyl Transferase; Hopene-Associated Glycosyltransferase HpnB; Glycosyl Transferase Group 2 Family Protein; Family 2 Glycosyl Transferase; Glycosyl Transferase Family 2 Protein; Glycosyl Transferase Group 2 Family; Glycosyltransferase; Integral Membrane Protein; HpnB Protein; Glycosyltransferase Involved In Cell Wall Biogenesis; Family 2 Glycosyl Transferase Protein; TPR Domain-Containing Protein; Glycosyl Transferase Domain-Containing Protein; Squalene-Phytoene Synthase
Number of amino acids: Translated: 397; Mature: 397
Protein sequence:
>397_residues MFQKFLLITVISNFIIWIYLLIFRGNFWLANQQLLSKSKTKIENTENLPSIYVIIPARNEEKLLKITLNSLLNQDYSGIL KIILVDDHSKDNTINIANSLAQQGHNSTKLEVISAADLPSNWTGKLWAINEGINYAKKQTPAPDYFLLTDADIEHFPTNI RQLVVKAEQENLALVSLMVKLQCETIAEKLMIPAFVFFFQKLYPFKWVNNPQNTTAAAAGGCILVRHKNLDQVGGIEVIK NALIDDCNLAKIVKQKSTNKNIWLGLTNDTKSRRSYPDLMSIWNMVARTAFTQLNYSPFLLLVTVIGMKLVYLIPSLGII LGVIFGWWPVVVIAILARLLIFLAYLPIIRFYGLSPIYAMSLPTVALIYILITIDSAWRHWRGRGGYWKGRVNTSIF
Sequences:
>Translated_397_residues MFQKFLLITVISNFIIWIYLLIFRGNFWLANQQLLSKSKTKIENTENLPSIYVIIPARNEEKLLKITLNSLLNQDYSGIL KIILVDDHSKDNTINIANSLAQQGHNSTKLEVISAADLPSNWTGKLWAINEGINYAKKQTPAPDYFLLTDADIEHFPTNI RQLVVKAEQENLALVSLMVKLQCETIAEKLMIPAFVFFFQKLYPFKWVNNPQNTTAAAAGGCILVRHKNLDQVGGIEVIK NALIDDCNLAKIVKQKSTNKNIWLGLTNDTKSRRSYPDLMSIWNMVARTAFTQLNYSPFLLLVTVIGMKLVYLIPSLGII LGVIFGWWPVVVIAILARLLIFLAYLPIIRFYGLSPIYAMSLPTVALIYILITIDSAWRHWRGRGGYWKGRVNTSIF >Mature_397_residues MFQKFLLITVISNFIIWIYLLIFRGNFWLANQQLLSKSKTKIENTENLPSIYVIIPARNEEKLLKITLNSLLNQDYSGIL KIILVDDHSKDNTINIANSLAQQGHNSTKLEVISAADLPSNWTGKLWAINEGINYAKKQTPAPDYFLLTDADIEHFPTNI RQLVVKAEQENLALVSLMVKLQCETIAEKLMIPAFVFFFQKLYPFKWVNNPQNTTAAAAGGCILVRHKNLDQVGGIEVIK NALIDDCNLAKIVKQKSTNKNIWLGLTNDTKSRRSYPDLMSIWNMVARTAFTQLNYSPFLLLVTVIGMKLVYLIPSLGII LGVIFGWWPVVVIAILARLLIFLAYLPIIRFYGLSPIYAMSLPTVALIYILITIDSAWRHWRGRGGYWKGRVNTSIF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45092; Mature: 45092
Theoretical pI: Translated: 9.96; Mature: 9.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFQKFLLITVISNFIIWIYLLIFRGNFWLANQQLLSKSKTKIENTENLPSIYVIIPARNE CCCHHHHHHHHHHHHHHHHHHHHCCCCEEECHHHHHHHHHHCCCCCCCCEEEEEEECCCC EKLLKITLNSLLNQDYSGILKIILVDDHSKDNTINIANSLAQQGHNSTKLEVISAADLPS CHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCEEHHHHHHHHCCCCCCEEEEEEECCCCC NWTGKLWAINEGINYAKKQTPAPDYFLLTDADIEHFPTNIRQLVVKAEQENLALVSLMVK CCCCEEEEEECCCCHHHHCCCCCCEEEEECCCHHHCCHHHHHHHHHHCCCCHHHHHHHHH LQCETIAEKLMIPAFVFFFQKLYPFKWVNNPQNTTAAAAGGCILVRHKNLDQVGGIEVIK HHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCHHHCCCEEEEEECCCCHHCCHHHHH NALIDDCNLAKIVKQKSTNKNIWLGLTNDTKSRRSYPDLMSIWNMVARTAFTQLNYSPFL HHHHCCCHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHH LLVTVIGMKLVYLIPSLGIILGVIFGWWPVVVIAILARLLIFLAYLPIIRFYGLSPIYAM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH SLPTVALIYILITIDSAWRHWRGRGGYWKGRVNTSIF HHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCC >Mature Secondary Structure MFQKFLLITVISNFIIWIYLLIFRGNFWLANQQLLSKSKTKIENTENLPSIYVIIPARNE CCCHHHHHHHHHHHHHHHHHHHHCCCCEEECHHHHHHHHHHCCCCCCCCEEEEEEECCCC EKLLKITLNSLLNQDYSGILKIILVDDHSKDNTINIANSLAQQGHNSTKLEVISAADLPS CHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCEEHHHHHHHHCCCCCCEEEEEEECCCCC NWTGKLWAINEGINYAKKQTPAPDYFLLTDADIEHFPTNIRQLVVKAEQENLALVSLMVK CCCCEEEEEECCCCHHHHCCCCCCEEEEECCCHHHCCHHHHHHHHHHCCCCHHHHHHHHH LQCETIAEKLMIPAFVFFFQKLYPFKWVNNPQNTTAAAAGGCILVRHKNLDQVGGIEVIK HHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCHHHCCCEEEEEECCCCHHCCHHHHH NALIDDCNLAKIVKQKSTNKNIWLGLTNDTKSRRSYPDLMSIWNMVARTAFTQLNYSPFL HHHHCCCHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHH LLVTVIGMKLVYLIPSLGIILGVIFGWWPVVVIAILARLLIFLAYLPIIRFYGLSPIYAM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH SLPTVALIYILITIDSAWRHWRGRGGYWKGRVNTSIF HHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA