Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475042

Identifier: 113475042

GI number: 113475042

Start: 1987176

End: 1987925

Strand: Reverse

Name: 113475042

Synonym: Tery_1302

Alternate gene names: NA

Gene position: 1987925-1987176 (Counterclockwise)

Preceding gene: 113475043

Following gene: 113475041

Centisome position: 25.65

GC content: 29.47

Gene sequence:

>750_bases
ATGGTAATTATTTCCAGAATAAAATTTTTATTAATCGTAACTATTTCCCTAATAATTTTTCTATACTTTCCTAATTTAAC
ATTTCAAAAAGTTTCGGCTCAACTTATATTATCACCCGAAATAAACGCCTTAGATGCTAGTTTTAATAAACCTAAAATTT
ATTCTTTTGTCGAATCGGGATTTAATTATAGTCAACAACTTTACGGTAAACCGAGAATACCAGTAAAAAAAGTCAATTTA
AACTTAAATACAACTCCTTTAACTTCACTTGATAATGCAAATCAAGGAGAGTTTACTATTTACTTAAATCGTAAACCATC
TGAATATGCTTTCCATGGTCAATTAGCTCACGAAATATTTCATTTATTAAATGCACAATTACTTGACTGCTATGCAGAGG
GTTTAGCTACTCTTTTTGCAGAAAAATTGTTAACTCGTAATAACTTAAATTGGAGTGGTTGGGAAGAATATTTTCAACAA
GGTTTTGAACCTTTTTATGGCTTGAGCTACTTTATGATGAAAGAAGTTAGCGATACAGCAGGCGAAACAAATATGAGTCG
TTTGCTTGAGTTTGTTGTTTACAATAATTCTATGAAAAAGTGGATGCATATTAATATTAGTGAATGGCTATCCTCAATGT
CTGATAATGTAAAAATTGAGGTAGAAGAAGTGATTAACAAACATATTACTCAAGTTCAACAAGTAACTGAATCAAATAAT
CAGATGTATAGTTGTTTAGAACCTAGTTAA

Upstream 100 bases:

>100_bases
TGCACTATAATTATCAACATAACACTTAGTAAGTTTGTTGAATTAGAGGTAACAAAAGCAAACAAATATTAGCTCATATT
TTCCTATTTGATACAGATTT

Downstream 100 bases:

>100_bases
ATAATTTTATTTTTTCCTGAAAAAATATTGATTAATTCTACTCCCTTTAAATCTTTTTTTCCTTTCTGCCTTCTGCTTTC
TGCCAAGGTCCTCCAAAGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MVIISRIKFLLIVTISLIIFLYFPNLTFQKVSAQLILSPEINALDASFNKPKIYSFVESGFNYSQQLYGKPRIPVKKVNL
NLNTTPLTSLDNANQGEFTIYLNRKPSEYAFHGQLAHEIFHLLNAQLLDCYAEGLATLFAEKLLTRNNLNWSGWEEYFQQ
GFEPFYGLSYFMMKEVSDTAGETNMSRLLEFVVYNNSMKKWMHINISEWLSSMSDNVKIEVEEVINKHITQVQQVTESNN
QMYSCLEPS

Sequences:

>Translated_249_residues
MVIISRIKFLLIVTISLIIFLYFPNLTFQKVSAQLILSPEINALDASFNKPKIYSFVESGFNYSQQLYGKPRIPVKKVNL
NLNTTPLTSLDNANQGEFTIYLNRKPSEYAFHGQLAHEIFHLLNAQLLDCYAEGLATLFAEKLLTRNNLNWSGWEEYFQQ
GFEPFYGLSYFMMKEVSDTAGETNMSRLLEFVVYNNSMKKWMHINISEWLSSMSDNVKIEVEEVINKHITQVQQVTESNN
QMYSCLEPS
>Mature_249_residues
MVIISRIKFLLIVTISLIIFLYFPNLTFQKVSAQLILSPEINALDASFNKPKIYSFVESGFNYSQQLYGKPRIPVKKVNL
NLNTTPLTSLDNANQGEFTIYLNRKPSEYAFHGQLAHEIFHLLNAQLLDCYAEGLATLFAEKLLTRNNLNWSGWEEYFQQ
GFEPFYGLSYFMMKEVSDTAGETNMSRLLEFVVYNNSMKKWMHINISEWLSSMSDNVKIEVEEVINKHITQVQQVTESNN
QMYSCLEPS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28802; Mature: 28802

Theoretical pI: Translated: 5.65; Mature: 5.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVIISRIKFLLIVTISLIIFLYFPNLTFQKVSAQLILSPEINALDASFNKPKIYSFVESG
CCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCEEEEECCCCCHHCCCCCCCHHHHHHHHC
FNYSQQLYGKPRIPVKKVNLNLNTTPLTSLDNANQGEFTIYLNRKPSEYAFHGQLAHEIF
CCHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHH
HLLNAQLLDCYAEGLATLFAEKLLTRNNLNWSGWEEYFQQGFEPFYGLSYFMMKEVSDTA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHC
GETNMSRLLEFVVYNNSMKKWMHINISEWLSSMSDNVKIEVEEVINKHITQVQQVTESNN
CCCCHHHHHHHHHHCCCHHHHEEEEHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHCCC
QMYSCLEPS
CEEECCCCC
>Mature Secondary Structure
MVIISRIKFLLIVTISLIIFLYFPNLTFQKVSAQLILSPEINALDASFNKPKIYSFVESG
CCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCEEEEECCCCCHHCCCCCCCHHHHHHHHC
FNYSQQLYGKPRIPVKKVNLNLNTTPLTSLDNANQGEFTIYLNRKPSEYAFHGQLAHEIF
CCHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHH
HLLNAQLLDCYAEGLATLFAEKLLTRNNLNWSGWEEYFQQGFEPFYGLSYFMMKEVSDTA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHC
GETNMSRLLEFVVYNNSMKKWMHINISEWLSSMSDNVKIEVEEVINKHITQVQQVTESNN
CCCCHHHHHHHHHHCCCHHHHEEEEHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHCCC
QMYSCLEPS
CEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA