Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475032

Identifier: 113475032

GI number: 113475032

Start: 1969872

End: 1970255

Strand: Reverse

Name: 113475032

Synonym: Tery_1289

Alternate gene names: NA

Gene position: 1970255-1969872 (Counterclockwise)

Preceding gene: 113475033

Following gene: 113475026

Centisome position: 25.42

GC content: 33.07

Gene sequence:

>384_bases
GTGATTGTGTTAACCAATGGTAAAGATATTGTTGATATCGAAGCTAGAAAACTAGGCCAAATAAGTGAGATAAATTTTTT
TCGTGAAATCCAAGAAAAATTCCATCAAGAACAAAAATTTACCAGGGACAAAGCTTATGTGGGAGAACCAGCAATAAAAA
CGCCTAAAAAAAAGCCCCCTATTCAAGAATTAACCAGTAAGGAAAAGTCTCAAAATAAAGAGCTGGCATCTGAAAGAATT
TTGGTAGAACATATAATTAGATTACTCAAAATATTTCGAGTAGCCCAGGAAAGATTCAGGCTAAATTCTGATAAATATAC
GCAAATAATAATGACTATTTGTGGACTTGTAATACTGGGAAGAGGGACGGTTATTTTGTCTTAA

Upstream 100 bases:

>100_bases
CATAGATAGCTATGAACAGGGTATAGAAAGGCTAGAAAAATCTGAACAACAAAAAGAATATTACTCAGGAAAGAAAAAAA
GTCATACAAGAAAAAGTTAG

Downstream 100 bases:

>100_bases
TAAATTTGCCAATAATTTCTGAAAAAATTCTTGGTTGAAAATACTATAATTAGGGCTATATATTAATACTAACTATCTCT
AATACCTATGAGACTGTAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 127; Mature: 127

Protein sequence:

>127_residues
MIVLTNGKDIVDIEARKLGQISEINFFREIQEKFHQEQKFTRDKAYVGEPAIKTPKKKPPIQELTSKEKSQNKELASERI
LVEHIIRLLKIFRVAQERFRLNSDKYTQIIMTICGLVILGRGTVILS

Sequences:

>Translated_127_residues
MIVLTNGKDIVDIEARKLGQISEINFFREIQEKFHQEQKFTRDKAYVGEPAIKTPKKKPPIQELTSKEKSQNKELASERI
LVEHIIRLLKIFRVAQERFRLNSDKYTQIIMTICGLVILGRGTVILS
>Mature_127_residues
MIVLTNGKDIVDIEARKLGQISEINFFREIQEKFHQEQKFTRDKAYVGEPAIKTPKKKPPIQELTSKEKSQNKELASERI
LVEHIIRLLKIFRVAQERFRLNSDKYTQIIMTICGLVILGRGTVILS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14738; Mature: 14738

Theoretical pI: Translated: 10.35; Mature: 10.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVLTNGKDIVDIEARKLGQISEINFFREIQEKFHQEQKFTRDKAYVGEPAIKTPKKKPP
CEEECCCCCEEEHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
IQELTSKEKSQNKELASERILVEHIIRLLKIFRVAQERFRLNSDKYTQIIMTICGLVILG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHC
RGTVILS
CCCEEEC
>Mature Secondary Structure
MIVLTNGKDIVDIEARKLGQISEINFFREIQEKFHQEQKFTRDKAYVGEPAIKTPKKKPP
CEEECCCCCEEEHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
IQELTSKEKSQNKELASERILVEHIIRLLKIFRVAQERFRLNSDKYTQIIMTICGLVILG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHC
RGTVILS
CCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA