Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475019

Identifier: 113475019

GI number: 113475019

Start: 1954986

End: 1955288

Strand: Direct

Name: 113475019

Synonym: Tery_1271

Alternate gene names: NA

Gene position: 1954986-1955288 (Clockwise)

Preceding gene: 113475018

Following gene: 113475020

Centisome position: 25.23

GC content: 36.63

Gene sequence:

>303_bases
ATGATTTACTGTCTAAAAACCAATCAAGTATTGACTCGCGCAGAACTAGCCAAGGTACTAGGTCGCCATGAGTCAACGAT
TACACGCTGGCTCACACTTTATCGAGCTGGAGGACTAAAAAAGCTGTTAGAAGTCAAAAATGTACCCGGAAAAACTTCAA
AAATTTCTCCCGAAATTTTAGCAGGTTTACAAGCCAAATTATCAGAAACAATTGGGTTCAATAGTTTAGGAGAAATTCCA
AAGTGGTTAATAGAAAAATATCAAGTTCAACTAGCCGATAAAACCGTTCATAAAATCTTTTGA

Upstream 100 bases:

>100_bases
TACAGGATTATTTTAGTTAAAAATATGAATTTTAATTTTGTTATAAATCGTCAATATTTACTTAAATAGCACACATATTT
TACAATAACGCTTGATTTAA

Downstream 100 bases:

>100_bases
TATAAATTAAAAGCTCAACCGAAAACACCTCGTTCTTATAGTATTAAAAAGGATGTTTTAGCTGAAGAAAATTAAAAAAA
AACTGAAATTAGGATTGAAG

Product: putative transposase, orfA

Products: NA

Alternate protein names: Transposase OrfA

Number of amino acids: Translated: 100; Mature: 100

Protein sequence:

>100_residues
MIYCLKTNQVLTRAELAKVLGRHESTITRWLTLYRAGGLKKLLEVKNVPGKTSKISPEILAGLQAKLSETIGFNSLGEIP
KWLIEKYQVQLADKTVHKIF

Sequences:

>Translated_100_residues
MIYCLKTNQVLTRAELAKVLGRHESTITRWLTLYRAGGLKKLLEVKNVPGKTSKISPEILAGLQAKLSETIGFNSLGEIP
KWLIEKYQVQLADKTVHKIF
>Mature_100_residues
MIYCLKTNQVLTRAELAKVLGRHESTITRWLTLYRAGGLKKLLEVKNVPGKTSKISPEILAGLQAKLSETIGFNSLGEIP
KWLIEKYQVQLADKTVHKIF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11279; Mature: 11279

Theoretical pI: Translated: 10.48; Mature: 10.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIYCLKTNQVLTRAELAKVLGRHESTITRWLTLYRAGGLKKLLEVKNVPGKTSKISPEIL
CEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCHHHH
AGLQAKLSETIGFNSLGEIPKWLIEKYQVQLADKTVHKIF
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIYCLKTNQVLTRAELAKVLGRHESTITRWLTLYRAGGLKKLLEVKNVPGKTSKISPEIL
CEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCHHHH
AGLQAKLSETIGFNSLGEIPKWLIEKYQVQLADKTVHKIF
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA