Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474985

Identifier: 113474985

GI number: 113474985

Start: 1893730

End: 1893888

Strand: Reverse

Name: 113474985

Synonym: Tery_1219

Alternate gene names: NA

Gene position: 1893888-1893730 (Counterclockwise)

Preceding gene: 113474986

Following gene: 113474984

Centisome position: 24.44

GC content: 33.96

Gene sequence:

>159_bases
GTGGTCAAAAAGAGGGGAAAATTTTCTGGAGATAGGCAAGGAAAAAGGGGAAAAAGAGAAAACTTAGTTCCTGGTATAAA
AAAAGGAAAAAAAGATTTAATTCCATCAATGATATTCATAGGAAGTTTGAATGTAGAAAACTGGGAAGGCTGGTTATGA

Upstream 100 bases:

>100_bases
CTTATCAGGATTTATGGAAATTAATCAAAATATATGGGATTAAAAGTTTAGTATTTCTTTTGGATTCAGGATTTGAATAA
TTTCTAAATTGTCTTTATTT

Downstream 100 bases:

>100_bases
ATATGTTGATTGCCATCATTGAAAATTACATCAGTTTGGATTATAAATCATGCACCAATTCATCAAAAAATAGTGATTAA
ATAAATACTTGAATATGGAG

Product: IS630 family transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 52; Mature: 52

Protein sequence:

>52_residues
MVKKRGKFSGDRQGKRGKRENLVPGIKKGKKDLIPSMIFIGSLNVENWEGWL

Sequences:

>Translated_52_residues
MVKKRGKFSGDRQGKRGKRENLVPGIKKGKKDLIPSMIFIGSLNVENWEGWL
>Mature_52_residues
MVKKRGKFSGDRQGKRGKRENLVPGIKKGKKDLIPSMIFIGSLNVENWEGWL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 5928; Mature: 5928

Theoretical pI: Translated: 11.28; Mature: 11.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKKRGKFSGDRQGKRGKRENLVPGIKKGKKDLIPSMIFIGSLNVENWEGWL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCEEECCCCCCCCCCCCC
>Mature Secondary Structure
MVKKRGKFSGDRQGKRGKRENLVPGIKKGKKDLIPSMIFIGSLNVENWEGWL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA