Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474983

Identifier: 113474983

GI number: 113474983

Start: 1892035

End: 1892247

Strand: Reverse

Name: 113474983

Synonym: Tery_1216

Alternate gene names: NA

Gene position: 1892247-1892035 (Counterclockwise)

Preceding gene: 113474984

Following gene: 113474981

Centisome position: 24.42

GC content: 30.52

Gene sequence:

>213_bases
ATGTCGTATTCAGAAGTTCAAAGCCCAGAAATACTCTGGAATTATAAAAACCAACAGAGTTGTGAACGTGGTTTCAGAGT
TCTCAAAGCTCAACTATTTTTTGCCGATAGTTTTTTTGTCAAAAAACCAGAAATAGTAGAAACAATACTGTTTATTATGT
TACTGTGTTTATTATTGTATAATTTTGGTAAAAAAGAGCTGAGAAAGACTTAA

Upstream 100 bases:

>100_bases
ACCAGGTATATTTGAAGGATTAAGTGATATAGAATGGAAGTTATTTGAAGATATTTTTCCTATTTCACCAGAAAGAATGT
AAAGGTATACCTCATACTCC

Downstream 100 bases:

>100_bases
AAAAAAACAATAGTGAAGTGAAAAACTAGTTAAGAAAGTTGATAAATACTCCGATATTAAGATGGATATTTTAATATTTT
CAATGAGTAAATTTGTTAAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 70; Mature: 69

Protein sequence:

>70_residues
MSYSEVQSPEILWNYKNQQSCERGFRVLKAQLFFADSFFVKKPEIVETILFIMLLCLLLYNFGKKELRKT

Sequences:

>Translated_70_residues
MSYSEVQSPEILWNYKNQQSCERGFRVLKAQLFFADSFFVKKPEIVETILFIMLLCLLLYNFGKKELRKT
>Mature_69_residues
SYSEVQSPEILWNYKNQQSCERGFRVLKAQLFFADSFFVKKPEIVETILFIMLLCLLLYNFGKKELRKT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8372; Mature: 8241

Theoretical pI: Translated: 9.21; Mature: 9.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYSEVQSPEILWNYKNQQSCERGFRVLKAQLFFADSFFVKKPEIVETILFIMLLCLLLY
CCCCCCCCCHHEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
NFGKKELRKT
HCCHHHHCCC
>Mature Secondary Structure 
SYSEVQSPEILWNYKNQQSCERGFRVLKAQLFFADSFFVKKPEIVETILFIMLLCLLLY
CCCCCCCCHHEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
NFGKKELRKT
HCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA