| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113474951
Identifier: 113474951
GI number: 113474951
Start: 1851088
End: 1852776
Strand: Reverse
Name: 113474951
Synonym: Tery_1181
Alternate gene names: NA
Gene position: 1852776-1851088 (Counterclockwise)
Preceding gene: 113474952
Following gene: 113474950
Centisome position: 23.91
GC content: 36.12
Gene sequence:
>1689_bases ATGAAATCAGAATTAAATGATTATACAGAAAAGTACAATCAACTGCAAGCAGAATTTCAGGAATCTCAACAAGAGGGAAG GGAGATGAAATCAGAATTAAATGATTATACAGAAAAGTACAATCAACTGGAAACAGAATTTCAGGAATCTCAACAAGAGG GAAGGGAGATGAAATCAGAATTAAATGATTATACAGAAAAGTACAATCAACTGCAAACAGAATTTCAGGAATCTCAACAA GAGGGAAGGGAGATGAAATCAAAATTGGATGATTACACAGAAAAGCACAATCAACTGGAAACAGAATTACAGGAGTCTCA AAAAGAGCGATCGCCAGAAATAGCAGAAAAGTTGAATAATTTAACTAAGCAAGTTGTAGCGGGAAATCAAGAACAGGAGG TTCAAAAATCTAAGTTGTTGATCATAGAAACAAATTTGCAGAAGGTTTTAGAACAATTATCCCAACAAATCTATCCTGCA GAAAATCTAGAGTCTGGGTTGCTAGAAATATTGGAAAATTTGAACGAGCAAGTAGGAGTGCGTATTCAATCTCAGTTATC AACCATAGAAACAAATTTGCAAAAGTGTTGGAAAAAATTGTCTCAAGAGAGTAGTCAAGACGAACTCTTAGAAATAATTT CTCAACAAGTTAGTTCCTTAACAGAAAGGCTAGATAACATTAAACAATCTTCCTCCCCAAAAGAAATATCACCACCCCCA TCGCCAATAGGTCTCAATCTAAGTTGGCAAGAAGCTGAGTTAGCAGCAACTTATAATGCAAGTCCAGATTCATTATTAGA AATAGCAATAACAGTCTCAGAAACAGAAGCAAGTATGAATCAATCCATTCAGGAAGTAGTATTTGAAACTAACCGCCGGG GAAATTATTGGATAATATCCCAAGAAAGTGACAACTATCTAATTCCTAAACAACATATCAAACTTAATCAATTTAATAAA CAAATGTTTACTAGATTATTTGAATCTTCCAGTTTCCAGGAAGACTCTAGTAAACTATTACTCCTAAAACCCGCTAAAGT ATCTCCAATTAATTTAGGTAAAAGTTGGCAGTTGTCCGAGCCTGGTATAGTTAAGTGGATACAGATAAAAATGTCATCCT CAGATACTCCAACACCAACACCAGAACCAACACCAGAACGAACGCCAGAACCAACACCAGAACCAACACCAGAAACAACA CCAGAACCAACACCAGAACCAACACCAGAACCAACACCAGAACCAACACCAGAACCAACAAGAATTCTGCCACCGCTACC ACCTGAAGAAGCTAATTTTGTAGAGCTTTACAATAGCAGTCAGAGCTGGCGCTCGAAAAAACCTACAACTGTTGCAAAAG TCAATGATAGTAGCAATACAGTTATTTTGGAAAAAAAGAGATTCGGAAATTACTGGATATTATCGGAGGAAAGCGGTGAC TATTTAGCTCCCAGACAGAAGGCCAACATTAACCCAGATAATAATGAAGATGTACAAGGTTTATTTGAATGTTATGGAGA TTCGTCAGGGGAGTTGAAGAAGTTTCAATTACTGAAGCTAGCAAAAGTCGAACCTACAGAAGATAGAGGTAAGTGGAAAG TTTTAGAATTGGGAGTATTAAAATTTGAATCTAGGAAGTTAAAAGATGAGGATAACTCTGAAAATGAAAATCAGACAAAA GAAAGTTAA
Upstream 100 bases:
>100_bases ACAAGAGCGATCGCGATTGAAATCAGAATTAGATGATTACACAGAAAAGTACAATCAACTGCAAACATAATTTCAGCAAT CTCAACAAGAGGGAAGGGAG
Downstream 100 bases:
>100_bases AAGTCAAAAGTCAAAAGTCAAAAGTCAGAATTAAAGAAAGTCAAATGATTTCTGTGAAAACGTATTAGAGAGCTTTTCAG TATTGATGACCTCACGTCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 562; Mature: 562
Protein sequence:
>562_residues MKSELNDYTEKYNQLQAEFQESQQEGREMKSELNDYTEKYNQLETEFQESQQEGREMKSELNDYTEKYNQLQTEFQESQQ EGREMKSKLDDYTEKHNQLETELQESQKERSPEIAEKLNNLTKQVVAGNQEQEVQKSKLLIIETNLQKVLEQLSQQIYPA ENLESGLLEILENLNEQVGVRIQSQLSTIETNLQKCWKKLSQESSQDELLEIISQQVSSLTERLDNIKQSSSPKEISPPP SPIGLNLSWQEAELAATYNASPDSLLEIAITVSETEASMNQSIQEVVFETNRRGNYWIISQESDNYLIPKQHIKLNQFNK QMFTRLFESSSFQEDSSKLLLLKPAKVSPINLGKSWQLSEPGIVKWIQIKMSSSDTPTPTPEPTPERTPEPTPEPTPETT PEPTPEPTPEPTPEPTPEPTRILPPLPPEEANFVELYNSSQSWRSKKPTTVAKVNDSSNTVILEKKRFGNYWILSEESGD YLAPRQKANINPDNNEDVQGLFECYGDSSGELKKFQLLKLAKVEPTEDRGKWKVLELGVLKFESRKLKDEDNSENENQTK ES
Sequences:
>Translated_562_residues MKSELNDYTEKYNQLQAEFQESQQEGREMKSELNDYTEKYNQLETEFQESQQEGREMKSELNDYTEKYNQLQTEFQESQQ EGREMKSKLDDYTEKHNQLETELQESQKERSPEIAEKLNNLTKQVVAGNQEQEVQKSKLLIIETNLQKVLEQLSQQIYPA ENLESGLLEILENLNEQVGVRIQSQLSTIETNLQKCWKKLSQESSQDELLEIISQQVSSLTERLDNIKQSSSPKEISPPP SPIGLNLSWQEAELAATYNASPDSLLEIAITVSETEASMNQSIQEVVFETNRRGNYWIISQESDNYLIPKQHIKLNQFNK QMFTRLFESSSFQEDSSKLLLLKPAKVSPINLGKSWQLSEPGIVKWIQIKMSSSDTPTPTPEPTPERTPEPTPEPTPETT PEPTPEPTPEPTPEPTPEPTRILPPLPPEEANFVELYNSSQSWRSKKPTTVAKVNDSSNTVILEKKRFGNYWILSEESGD YLAPRQKANINPDNNEDVQGLFECYGDSSGELKKFQLLKLAKVEPTEDRGKWKVLELGVLKFESRKLKDEDNSENENQTK ES >Mature_562_residues MKSELNDYTEKYNQLQAEFQESQQEGREMKSELNDYTEKYNQLETEFQESQQEGREMKSELNDYTEKYNQLQTEFQESQQ EGREMKSKLDDYTEKHNQLETELQESQKERSPEIAEKLNNLTKQVVAGNQEQEVQKSKLLIIETNLQKVLEQLSQQIYPA ENLESGLLEILENLNEQVGVRIQSQLSTIETNLQKCWKKLSQESSQDELLEIISQQVSSLTERLDNIKQSSSPKEISPPP SPIGLNLSWQEAELAATYNASPDSLLEIAITVSETEASMNQSIQEVVFETNRRGNYWIISQESDNYLIPKQHIKLNQFNK QMFTRLFESSSFQEDSSKLLLLKPAKVSPINLGKSWQLSEPGIVKWIQIKMSSSDTPTPTPEPTPERTPEPTPEPTPETT PEPTPEPTPEPTPEPTPEPTRILPPLPPEEANFVELYNSSQSWRSKKPTTVAKVNDSSNTVILEKKRFGNYWILSEESGD YLAPRQKANINPDNNEDVQGLFECYGDSSGELKKFQLLKLAKVEPTEDRGKWKVLELGVLKFESRKLKDEDNSENENQTK ES
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 64505; Mature: 64505
Theoretical pI: Translated: 4.32; Mature: 4.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSELNDYTEKYNQLQAEFQESQQEGREMKSELNDYTEKYNQLETEFQESQQEGREMKSE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LNDYTEKYNQLQTEFQESQQEGREMKSKLDDYTEKHNQLETELQESQKERSPEIAEKLNN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH LTKQVVAGNQEQEVQKSKLLIIETNLQKVLEQLSQQIYPAENLESGLLEILENLNEQVGV HHHHHHCCCHHHHHHHCCEEEEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC RIQSQLSTIETNLQKCWKKLSQESSQDELLEIISQQVSSLTERLDNIKQSSSPKEISPPP HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC SPIGLNLSWQEAELAATYNASPDSLLEIAITVSETEASMNQSIQEVVFETNRRGNYWIIS CCEECCCCCCHHHHEEECCCCCCCEEEEEEEECHHHHHHHHHHHHHHHHCCCCCCEEEEE QESDNYLIPKQHIKLNQFNKQMFTRLFESSSFQEDSSKLLLLKPAKVSPINLGKSWQLSE ECCCCEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCC PGIVKWIQIKMSSSDTPTPTPEPTPERTPEPTPEPTPETTPEPTPEPTPEPTPEPTPEPT CCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC RILPPLPPEEANFVELYNSSQSWRSKKPTTVAKVNDSSNTVILEKKRFGNYWILSEESGD CCCCCCCCCCCCHHHHHCCCHHHCCCCCCEEEEECCCCCEEEEEECCCCCEEEEECCCCC YLAPRQKANINPDNNEDVQGLFECYGDSSGELKKFQLLKLAKVEPTEDRGKWKVLELGVL CCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEEHHH KFESRKLKDEDNSENENQTKES HHHCHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MKSELNDYTEKYNQLQAEFQESQQEGREMKSELNDYTEKYNQLETEFQESQQEGREMKSE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LNDYTEKYNQLQTEFQESQQEGREMKSKLDDYTEKHNQLETELQESQKERSPEIAEKLNN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH LTKQVVAGNQEQEVQKSKLLIIETNLQKVLEQLSQQIYPAENLESGLLEILENLNEQVGV HHHHHHCCCHHHHHHHCCEEEEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC RIQSQLSTIETNLQKCWKKLSQESSQDELLEIISQQVSSLTERLDNIKQSSSPKEISPPP HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC SPIGLNLSWQEAELAATYNASPDSLLEIAITVSETEASMNQSIQEVVFETNRRGNYWIIS CCEECCCCCCHHHHEEECCCCCCCEEEEEEEECHHHHHHHHHHHHHHHHCCCCCCEEEEE QESDNYLIPKQHIKLNQFNKQMFTRLFESSSFQEDSSKLLLLKPAKVSPINLGKSWQLSE ECCCCEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCC PGIVKWIQIKMSSSDTPTPTPEPTPERTPEPTPEPTPETTPEPTPEPTPEPTPEPTPEPT CCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC RILPPLPPEEANFVELYNSSQSWRSKKPTTVAKVNDSSNTVILEKKRFGNYWILSEESGD CCCCCCCCCCCCHHHHHCCCHHHCCCCCCEEEEECCCCCEEEEEECCCCCEEEEECCCCC YLAPRQKANINPDNNEDVQGLFECYGDSSGELKKFQLLKLAKVEPTEDRGKWKVLELGVL CCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEEHHH KFESRKLKDEDNSENENQTKES HHHCHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA