Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474868

Identifier: 113474868

GI number: 113474868

Start: 1707587

End: 1709560

Strand: Reverse

Name: 113474868

Synonym: Tery_1090

Alternate gene names: NA

Gene position: 1709560-1707587 (Counterclockwise)

Preceding gene: 113474869

Following gene: 113474865

Centisome position: 22.06

GC content: 35.61

Gene sequence:

>1974_bases
ATGCCAACAACTGAAAAAGGAAAAGTTCAATTTATCCAATTCCATCAGCCTGCATTAGAAAGTGGAACTTATGACTTAAA
AGTCGAACAAACCATCAAAGCAGGGGATAAAATTGATAACAATGGTAATGGTAAAACCTATAGTCGTGAACTAACTTTTG
TTGTCCAAGGTGAACGATTTGGTCCCTTATCTCCTAATGATATTTATGCCGTTTTTCCTCCCCCTGAAAGTTTAGGAGAA
CATTCCAACGTTTTACCCCATATTACTTTTAAAAGAAGTACCTTGCCTTGGGAACGTTACCCTGGACAAACAGATGACAA
CTTGCCTTGGTTAATTTTATTATTATTCCGAGAAAGCGATTTTGACGGGAATGAAGAGGATAAACCCAAACCCAAAAATG
TTACCCTTTCGGAATTAATTACAGAAAACTCTCCTAATATTAAATATCCTACAATGGTATTAGAATTAGGACAAACGCCA
AACCAACAAGTGACTGTTATTGATGTTAAAAAGAAATATCTTCAAGACATTTTACCAACTTACGAGGATCTTTCTTATAC
TGCTCATGTTCGTCGAAGATTACTAGCATCAGCATCAGAAGAAAATCTAAAGCTACTTGAGAAAGAATATTCTACAATTA
TTTGTAATCGTCTCCCCGAACCCAGTGGCAAAAGTACGGTTTATTTAGTGTCAATAGAAGGGCGTTATTCTAATAATAAA
TTTTATTTTATGGATGCAAAAGAAGACGATTTAATTCGCTTTGTTAGTTTAGCGAGTTGGGAATTTTCTTGTATTGATCC
TGAGCAAAGTTTCACCAAATTATTGCAAAGATTAAATCATGCTCCTTCCTCGCCAAGACTTCCCAAAAGTGATAATGAAA
AAGCAGAAGAATACTTAAAAAAAGGATACGTTACTATTCCCCATTCCCTCCGAAAAGGAAGTAAAACCTATTCTTGGTAT
AGCAGTCCCCTAGGTACAGCTTTTAATGATAAAGAACAAGAAATCTATGAGTTTCCTATGAAAGCATCGGATCAACTATT
ACGCTATGATTCCGAAATTGGAATGTTTGATATTTCCTATTCTGCTGCTTGGCAATTAGGTCGAATGTTAATGTTAGAAA
ATCAAGGGTTAGCGGTTCAACTATTCAAATGGAAACGAGAAGTTGTACAGAATATCAAACGTTTGCAACAACAACAGACC
CATTTACGACTAATTAACTCCACAAGTAGCAAAACAAAAAAAATTATCCCAAACCCTGTCAAACAATGGTTTCAAGGGTT
AGGATTATTACAAGGTGTTCCTTTTAATTATTTAGTACCTGATGAGGGCTTATTACCCCCAGAATCTATCCGTTTCTTCT
GTTTAGATTCTGTTTGGATAGACTGCTTACAGGATGGTGCGTTTAGTGTTGGTCGTGTTACGAAAGGTGATTTATCAGAC
GATAAAAAAATTATAGAACTTAACAATTTTCTGCGTCAGCAAAATAAAACAATTAGTGGAATTATTATGCGATCGCAAGT
AGTTTCTGGTTGGCCTGGTTTACTGGTTGATGGATATGATCAGGTTGTAAGTGATTTAGATTCAATTGACCCCACAGAAG
CCAATCTTTTACCCCTACTACGAATGGAAACCTTAGCTAAAGATGTGTTACTTTGTTTATTTGAAGGAGAAATCAAAACC
GTTGATATTCACTTACAACCGGAGTCAATGCACTTTGGGTTAGATGCACCAACGGAAGATTCTCCAGAATGGTCAAAAAA
TCTACGAAATAGTGAAGGAGAATTAATGGAAAACTCTATTCCTATTCCTTGGAAGAATGAAGAAAAAGAAGTGATTGATT
TACAAAAGTTCGCTACACAAATGAAGGAGACTCTAAGCAGCTCAGATGAAGATGAATTTACCTCTGGTCAATTTGGCTTA
CAAATGATAGAAGGTGTTCAAAAAGTTAGACTTGTTTTTAAGGAGTCAGTCTAA

Upstream 100 bases:

>100_bases
TTGAACAAAGTGAAACCCAACATCCATTAACCTTTTGTTTGGTTACGTTACTGCTAACCCAACCAACTCAATTATAAACT
AACAAAAAGGAGTCATTCCC

Downstream 100 bases:

>100_bases
TTGGAGCAGAAAAAAACGTCAATAGATTTCAGAAAAAGGCGTTGGTAAATTAAGGGATGAATTAAGCCGCAATAGGCACC
TCTCCAAATTTGAGAAGCGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 657; Mature: 656

Protein sequence:

>657_residues
MPTTEKGKVQFIQFHQPALESGTYDLKVEQTIKAGDKIDNNGNGKTYSRELTFVVQGERFGPLSPNDIYAVFPPPESLGE
HSNVLPHITFKRSTLPWERYPGQTDDNLPWLILLLFRESDFDGNEEDKPKPKNVTLSELITENSPNIKYPTMVLELGQTP
NQQVTVIDVKKKYLQDILPTYEDLSYTAHVRRRLLASASEENLKLLEKEYSTIICNRLPEPSGKSTVYLVSIEGRYSNNK
FYFMDAKEDDLIRFVSLASWEFSCIDPEQSFTKLLQRLNHAPSSPRLPKSDNEKAEEYLKKGYVTIPHSLRKGSKTYSWY
SSPLGTAFNDKEQEIYEFPMKASDQLLRYDSEIGMFDISYSAAWQLGRMLMLENQGLAVQLFKWKREVVQNIKRLQQQQT
HLRLINSTSSKTKKIIPNPVKQWFQGLGLLQGVPFNYLVPDEGLLPPESIRFFCLDSVWIDCLQDGAFSVGRVTKGDLSD
DKKIIELNNFLRQQNKTISGIIMRSQVVSGWPGLLVDGYDQVVSDLDSIDPTEANLLPLLRMETLAKDVLLCLFEGEIKT
VDIHLQPESMHFGLDAPTEDSPEWSKNLRNSEGELMENSIPIPWKNEEKEVIDLQKFATQMKETLSSSDEDEFTSGQFGL
QMIEGVQKVRLVFKESV

Sequences:

>Translated_657_residues
MPTTEKGKVQFIQFHQPALESGTYDLKVEQTIKAGDKIDNNGNGKTYSRELTFVVQGERFGPLSPNDIYAVFPPPESLGE
HSNVLPHITFKRSTLPWERYPGQTDDNLPWLILLLFRESDFDGNEEDKPKPKNVTLSELITENSPNIKYPTMVLELGQTP
NQQVTVIDVKKKYLQDILPTYEDLSYTAHVRRRLLASASEENLKLLEKEYSTIICNRLPEPSGKSTVYLVSIEGRYSNNK
FYFMDAKEDDLIRFVSLASWEFSCIDPEQSFTKLLQRLNHAPSSPRLPKSDNEKAEEYLKKGYVTIPHSLRKGSKTYSWY
SSPLGTAFNDKEQEIYEFPMKASDQLLRYDSEIGMFDISYSAAWQLGRMLMLENQGLAVQLFKWKREVVQNIKRLQQQQT
HLRLINSTSSKTKKIIPNPVKQWFQGLGLLQGVPFNYLVPDEGLLPPESIRFFCLDSVWIDCLQDGAFSVGRVTKGDLSD
DKKIIELNNFLRQQNKTISGIIMRSQVVSGWPGLLVDGYDQVVSDLDSIDPTEANLLPLLRMETLAKDVLLCLFEGEIKT
VDIHLQPESMHFGLDAPTEDSPEWSKNLRNSEGELMENSIPIPWKNEEKEVIDLQKFATQMKETLSSSDEDEFTSGQFGL
QMIEGVQKVRLVFKESV
>Mature_656_residues
PTTEKGKVQFIQFHQPALESGTYDLKVEQTIKAGDKIDNNGNGKTYSRELTFVVQGERFGPLSPNDIYAVFPPPESLGEH
SNVLPHITFKRSTLPWERYPGQTDDNLPWLILLLFRESDFDGNEEDKPKPKNVTLSELITENSPNIKYPTMVLELGQTPN
QQVTVIDVKKKYLQDILPTYEDLSYTAHVRRRLLASASEENLKLLEKEYSTIICNRLPEPSGKSTVYLVSIEGRYSNNKF
YFMDAKEDDLIRFVSLASWEFSCIDPEQSFTKLLQRLNHAPSSPRLPKSDNEKAEEYLKKGYVTIPHSLRKGSKTYSWYS
SPLGTAFNDKEQEIYEFPMKASDQLLRYDSEIGMFDISYSAAWQLGRMLMLENQGLAVQLFKWKREVVQNIKRLQQQQTH
LRLINSTSSKTKKIIPNPVKQWFQGLGLLQGVPFNYLVPDEGLLPPESIRFFCLDSVWIDCLQDGAFSVGRVTKGDLSDD
KKIIELNNFLRQQNKTISGIIMRSQVVSGWPGLLVDGYDQVVSDLDSIDPTEANLLPLLRMETLAKDVLLCLFEGEIKTV
DIHLQPESMHFGLDAPTEDSPEWSKNLRNSEGELMENSIPIPWKNEEKEVIDLQKFATQMKETLSSSDEDEFTSGQFGLQ
MIEGVQKVRLVFKESV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 75085; Mature: 74954

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTTEKGKVQFIQFHQPALESGTYDLKVEQTIKAGDKIDNNGNGKTYSRELTFVVQGERF
CCCCCCCCEEEEEECCCHHHCCCEEEEEHHHHHCCCCCCCCCCCCEEEEEEEEEEECCCC
GPLSPNDIYAVFPPPESLGEHSNVLPHITFKRSTLPWERYPGQTDDNLPWLILLLFRESD
CCCCCCCEEEEECCHHHHCCCCCCCCEEEEECCCCCHHHCCCCCCCCCCEEEEEEEECCC
FDGNEEDKPKPKNVTLSELITENSPNIKYPTMVLELGQTPNQQVTVIDVKKKYLQDILPT
CCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEEEEECCCCCCEEEEEHHHHHHHHHHCCC
YEDLSYTAHVRRRLLASASEENLKLLEKEYSTIICNRLPEPSGKSTVYLVSIEGRYSNNK
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECEECCCE
FYFMDAKEDDLIRFVSLASWEFSCIDPEQSFTKLLQRLNHAPSSPRLPKSDNEKAEEYLK
EEEEECCCCHHHHHHHHCCCEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHH
KGYVTIPHSLRKGSKTYSWYSSPLGTAFNDKEQEIYEFPMKASDQLLRYDSEIGMFDISY
CCCEECCHHHHCCCCCEEEECCCCCCCCCCCHHHHHHCCCCHHHHHHHHCCCCCEEEECH
SAAWQLGRMLMLENQGLAVQLFKWKREVVQNIKRLQQQQTHLRLINSTSSKTKKIIPNPV
HHHHHHCCEEEEECCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCHH
KQWFQGLGLLQGVPFNYLVPDEGLLPPESIRFFCLDSVWIDCLQDGAFSVGRVTKGDLSD
HHHHHHCHHHCCCCCCEECCCCCCCCHHHHEEEEHHHHHHHHHHCCCCCCCCCCCCCCCC
DKKIIELNNFLRQQNKTISGIIMRSQVVSGWPGLLVDGYDQVVSDLDSIDPTEANLLPLL
CHHHHHHHHHHHHHCCCHHHEEEHHHHHCCCCCCEECCHHHHHHHHHCCCCCCHHHHHHH
RMETLAKDVLLCLFEGEIKTVDIHLQPESMHFGLDAPTEDSPEWSKNLRNSEGELMENSI
HHHHHHHHHHHHEECCCEEEEEEEECCCCEEECCCCCCCCCCHHHHHCCCCCCHHHHCCC
PIPWKNEEKEVIDLQKFATQMKETLSSSDEDEFTSGQFGLQMIEGVQKVRLVFKESV
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PTTEKGKVQFIQFHQPALESGTYDLKVEQTIKAGDKIDNNGNGKTYSRELTFVVQGERF
CCCCCCCEEEEEECCCHHHCCCEEEEEHHHHHCCCCCCCCCCCCEEEEEEEEEEECCCC
GPLSPNDIYAVFPPPESLGEHSNVLPHITFKRSTLPWERYPGQTDDNLPWLILLLFRESD
CCCCCCCEEEEECCHHHHCCCCCCCCEEEEECCCCCHHHCCCCCCCCCCEEEEEEEECCC
FDGNEEDKPKPKNVTLSELITENSPNIKYPTMVLELGQTPNQQVTVIDVKKKYLQDILPT
CCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEEEEECCCCCCEEEEEHHHHHHHHHHCCC
YEDLSYTAHVRRRLLASASEENLKLLEKEYSTIICNRLPEPSGKSTVYLVSIEGRYSNNK
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECEECCCE
FYFMDAKEDDLIRFVSLASWEFSCIDPEQSFTKLLQRLNHAPSSPRLPKSDNEKAEEYLK
EEEEECCCCHHHHHHHHCCCEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHH
KGYVTIPHSLRKGSKTYSWYSSPLGTAFNDKEQEIYEFPMKASDQLLRYDSEIGMFDISY
CCCEECCHHHHCCCCCEEEECCCCCCCCCCCHHHHHHCCCCHHHHHHHHCCCCCEEEECH
SAAWQLGRMLMLENQGLAVQLFKWKREVVQNIKRLQQQQTHLRLINSTSSKTKKIIPNPV
HHHHHHCCEEEEECCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCHH
KQWFQGLGLLQGVPFNYLVPDEGLLPPESIRFFCLDSVWIDCLQDGAFSVGRVTKGDLSD
HHHHHHCHHHCCCCCCEECCCCCCCCHHHHEEEEHHHHHHHHHHCCCCCCCCCCCCCCCC
DKKIIELNNFLRQQNKTISGIIMRSQVVSGWPGLLVDGYDQVVSDLDSIDPTEANLLPLL
CHHHHHHHHHHHHHCCCHHHEEEHHHHHCCCCCCEECCHHHHHHHHHCCCCCCHHHHHHH
RMETLAKDVLLCLFEGEIKTVDIHLQPESMHFGLDAPTEDSPEWSKNLRNSEGELMENSI
HHHHHHHHHHHHEECCCEEEEEEEECCCCEEECCCCCCCCCCHHHHHCCCCCCHHHHCCC
PIPWKNEEKEVIDLQKFATQMKETLSSSDEDEFTSGQFGLQMIEGVQKVRLVFKESV
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA