Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

Click here to switch to the map view.

The map label for this gene is pgm [H]

Identifier: 113474864

GI number: 113474864

Start: 1701534

End: 1703168

Strand: Direct

Name: pgm [H]

Synonym: Tery_1084

Alternate gene names: 113474864

Gene position: 1701534-1703168 (Clockwise)

Preceding gene: 113474863

Following gene: 113474866

Centisome position: 21.95

GC content: 40.18

Gene sequence:

>1635_bases
ATGAATGTACAAACAGTTGTAACTAAACCATTTAGGGACCAAAAACCAGGCACTTCTGGACTCCGCAAAAAAGTACCAAT
TTTTAAAGAACCCCATTACCTAGAAAACTTTATTCAGTCTATCTTTGACAGTCTAGAAGGTTTTTCGGGTCAAACATTTG
TACTTGGTGGTGATGGTCGCTATTACAACCGTCAGGCAATTCAAATAATTCTGAAAATGGCTGCCGCTAATGGAGTTGGT
CGAATGTTAGTGGGTCAAGGTGGTATTCTTTCCACCCCTGCTGCTTCCTGCATCATCCGCAAAAATCAAGCCTTTGGTGG
TATAATTTTGTCTGCTAGTCACAACCCTGGTGGACCAGAAGAGGACTTTGGTGTTAAGTACAATATTAGTAATGGTGGCC
CCGCTCCAGAAAAAGTGACAAGTGCCATTTATGAACGTAGTAAAGTTATAGATAGCTACAAAATTCTTGAAGCTAAGAGT
ATTAACTTAGACCAACTAGGTAGTGAGAAGTTAGGGGAAATGACTGTAGAAGTTATTGACTCTGTAGCAGACTACGCTGA
TTTGATGGAATCATTGTTTGATTTTGGCAAATTATCACAACTGCTAAGTTCTGGTAAGTTTCGGATGTGTATGGACTCAT
TACATGCTGTTACCGGACCTTATGCTAAAAATATTTTTGAGCAACGCTTAGGGGCTCCTCTGGGTACAGTGAAAAATGGT
ATGCCTCTGGAAGATTTTGGCGGTGGACATCCCGACCCTAATTTAGTATATGCTCATGACTTGGTAGAAATTATGTTTGG
TGATAATGCTCCGGACTTTGGTGCTGCTTCTGATGGGGATGGCGATCGCAACATGATATTAGGGAAAAATTTCTTTGTCA
CTCCTAGCGATAGTTTAGCAATATTAGCTGCTAATGCTAAGTTAGTTCCTGGATATAGTTCTGGTTTAACTGGTATTGCT
CGTTCCATGCCAACTTCGGCAGCAGCAGACCGAGTAGCAGAGAAAATGGGTCTTGACTGTTATGAAACTCCTACTGGTTG
GAAATTTTTTGGTAACTTATTAGATGCGGATAAAGCTACTCTTTGCGGTGAGGAAAGCTTTGGTACAGGGTCTAATCATG
TACGGGAAAAAGACGGACTCTGGGCAGTATTATTTTGGTTGAATATTCTGGCAGCAAGGCAAGAGTCAGTAGAAGATATT
GTTAAAGAACACTGGAAAACTTACGGTCGCAACTATTATTCTCGCCATGACTATGAAGGGATAGAAAGCGATAAAGCTAG
TACTTTGATGGAAAATTTACGTTCTCTATTACCTTCTTTACCAGGAAAACAGTATGGTCAATATGAAGTCAAATATGCTG
ATGATTTTCGCTATACGGATCCAATAGATGGTAGCGTGAGTCAGAAACAAGGTATTCGTATTGGTTTCAGTGATGGTTCT
CGTATGGTATTCCGACTTTCAGGTACAGGAACTCAGGGAGCAACTCTACGTTTGTATGTTGAAAGTTATGAACCAGATAC
TACTAAGCAAGACCAAGATACTCAAATTGCATTATCTCCTCTGATCAGTTTAGCAGATGAAATTGCTCAAATCAAGAATA
TTACAGGCCAGGAAAAGCCAACTGTAATTACCTAA

Upstream 100 bases:

>100_bases
AGTCAATAATTTAAAGTCAAAAGTTAAAATCTAAGATGAATTGACAATTTATAACTGATAACTGATATATAAATACAGTT
GTTAAATTTCTAGAAACCCC

Downstream 100 bases:

>100_bases
TTTATAAAGCAGGGAGTATTAGATTTGTCGGTCACTTAAAAAATCACCAAAAACCAAGTTCAGTAAAGATTGTAGCTATT
GTGCATCAAGCAAAGCTTAA

Product: phosphoglucomutase

Products: NA

Alternate protein names: PGM; Glucose phosphomutase [H]

Number of amino acids: Translated: 544; Mature: 544

Protein sequence:

>544_residues
MNVQTVVTKPFRDQKPGTSGLRKKVPIFKEPHYLENFIQSIFDSLEGFSGQTFVLGGDGRYYNRQAIQIILKMAAANGVG
RMLVGQGGILSTPAASCIIRKNQAFGGIILSASHNPGGPEEDFGVKYNISNGGPAPEKVTSAIYERSKVIDSYKILEAKS
INLDQLGSEKLGEMTVEVIDSVADYADLMESLFDFGKLSQLLSSGKFRMCMDSLHAVTGPYAKNIFEQRLGAPLGTVKNG
MPLEDFGGGHPDPNLVYAHDLVEIMFGDNAPDFGAASDGDGDRNMILGKNFFVTPSDSLAILAANAKLVPGYSSGLTGIA
RSMPTSAAADRVAEKMGLDCYETPTGWKFFGNLLDADKATLCGEESFGTGSNHVREKDGLWAVLFWLNILAARQESVEDI
VKEHWKTYGRNYYSRHDYEGIESDKASTLMENLRSLLPSLPGKQYGQYEVKYADDFRYTDPIDGSVSQKQGIRIGFSDGS
RMVFRLSGTGTQGATLRLYVESYEPDTTKQDQDTQIALSPLISLADEIAQIKNITGQEKPTVIT

Sequences:

>Translated_544_residues
MNVQTVVTKPFRDQKPGTSGLRKKVPIFKEPHYLENFIQSIFDSLEGFSGQTFVLGGDGRYYNRQAIQIILKMAAANGVG
RMLVGQGGILSTPAASCIIRKNQAFGGIILSASHNPGGPEEDFGVKYNISNGGPAPEKVTSAIYERSKVIDSYKILEAKS
INLDQLGSEKLGEMTVEVIDSVADYADLMESLFDFGKLSQLLSSGKFRMCMDSLHAVTGPYAKNIFEQRLGAPLGTVKNG
MPLEDFGGGHPDPNLVYAHDLVEIMFGDNAPDFGAASDGDGDRNMILGKNFFVTPSDSLAILAANAKLVPGYSSGLTGIA
RSMPTSAAADRVAEKMGLDCYETPTGWKFFGNLLDADKATLCGEESFGTGSNHVREKDGLWAVLFWLNILAARQESVEDI
VKEHWKTYGRNYYSRHDYEGIESDKASTLMENLRSLLPSLPGKQYGQYEVKYADDFRYTDPIDGSVSQKQGIRIGFSDGS
RMVFRLSGTGTQGATLRLYVESYEPDTTKQDQDTQIALSPLISLADEIAQIKNITGQEKPTVIT
>Mature_544_residues
MNVQTVVTKPFRDQKPGTSGLRKKVPIFKEPHYLENFIQSIFDSLEGFSGQTFVLGGDGRYYNRQAIQIILKMAAANGVG
RMLVGQGGILSTPAASCIIRKNQAFGGIILSASHNPGGPEEDFGVKYNISNGGPAPEKVTSAIYERSKVIDSYKILEAKS
INLDQLGSEKLGEMTVEVIDSVADYADLMESLFDFGKLSQLLSSGKFRMCMDSLHAVTGPYAKNIFEQRLGAPLGTVKNG
MPLEDFGGGHPDPNLVYAHDLVEIMFGDNAPDFGAASDGDGDRNMILGKNFFVTPSDSLAILAANAKLVPGYSSGLTGIA
RSMPTSAAADRVAEKMGLDCYETPTGWKFFGNLLDADKATLCGEESFGTGSNHVREKDGLWAVLFWLNILAARQESVEDI
VKEHWKTYGRNYYSRHDYEGIESDKASTLMENLRSLLPSLPGKQYGQYEVKYADDFRYTDPIDGSVSQKQGIRIGFSDGS
RMVFRLSGTGTQGATLRLYVESYEPDTTKQDQDTQIALSPLISLADEIAQIKNITGQEKPTVIT

Specific function: This enzyme participates in both the breakdown and synthesis of glucose. Required for the synthesis of capsular polysaccharide and normal lipopolysaccharide [H]

COG id: COG0033

COG function: function code G; Phosphoglucomutase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phosphohexose mutase family [H]

Homologues:

Organism=Homo sapiens, GI290463102, Length=558, Percent_Identity=57.3476702508961, Blast_Score=651, Evalue=0.0,
Organism=Homo sapiens, GI21361621, Length=562, Percent_Identity=56.0498220640569, Blast_Score=647, Evalue=0.0,
Organism=Homo sapiens, GI133922562, Length=561, Percent_Identity=52.0499108734403, Blast_Score=575, Evalue=1e-164,
Organism=Homo sapiens, GI290463104, Length=366, Percent_Identity=57.103825136612, Blast_Score=436, Evalue=1e-122,
Organism=Homo sapiens, GI239741729, Length=132, Percent_Identity=51.5151515151515, Blast_Score=126, Evalue=4e-29,
Organism=Homo sapiens, GI239743670, Length=134, Percent_Identity=48.5074626865672, Blast_Score=123, Evalue=5e-28,
Organism=Escherichia coli, GI1786904, Length=425, Percent_Identity=28.2352941176471, Blast_Score=95, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI17535441, Length=560, Percent_Identity=52.3214285714286, Blast_Score=575, Evalue=1e-164,
Organism=Saccharomyces cerevisiae, GI6323752, Length=571, Percent_Identity=48.5113835376532, Blast_Score=526, Evalue=1e-150,
Organism=Saccharomyces cerevisiae, GI6322722, Length=568, Percent_Identity=48.5915492957746, Blast_Score=511, Evalue=1e-146,
Organism=Drosophila melanogaster, GI17864244, Length=562, Percent_Identity=51.779359430605, Blast_Score=587, Evalue=1e-168,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005844
- InterPro:   IPR016055
- InterPro:   IPR005845
- InterPro:   IPR005846
- InterPro:   IPR005843
- InterPro:   IPR016066
- InterPro:   IPR005841 [H]

Pfam domain/function: PF02878 PGM_PMM_I; PF02879 PGM_PMM_II; PF02880 PGM_PMM_III; PF00408 PGM_PMM_IV [H]

EC number: =5.4.2.2 [H]

Molecular weight: Translated: 59336; Mature: 59336

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: PS00710 PGM_PMM

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVQTVVTKPFRDQKPGTSGLRKKVPIFKEPHYLENFIQSIFDSLEGFSGQTFVLGGDGR
CCCCEEEECCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCC
YYNRQAIQIILKMAAANGVGRMLVGQGGILSTPAASCIIRKNQAFGGIILSASHNPGGPE
CCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHEEEECCCCCCCEEEECCCCCCCCC
EDFGVKYNISNGGPAPEKVTSAIYERSKVIDSYKILEAKSINLDQLGSEKLGEMTVEVID
CCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCHHHCCCHHHHHHHHHHHH
SVADYADLMESLFDFGKLSQLLSSGKFRMCMDSLHAVTGPYAKNIFEQRLGAPLGTVKNG
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHCCC
MPLEDFGGGHPDPNLVYAHDLVEIMFGDNAPDFGAASDGDGDRNMILGKNFFVTPSDSLA
CCCHHCCCCCCCCCEEEHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCEEECCCCCEE
ILAANAKLVPGYSSGLTGIARSMPTSAAADRVAEKMGLDCYETPTGWKFFGNLLDADKAT
EEEECCEECCCCCCCHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCHHH
LCGEESFGTGSNHVREKDGLWAVLFWLNILAARQESVEDIVKEHWKTYGRNYYSRHDYEG
HCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
IESDKASTLMENLRSLLPSLPGKQYGQYEVKYADDFRYTDPIDGSVSQKQGIRIGFSDGS
CCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEECCCC
RMVFRLSGTGTQGATLRLYVESYEPDTTKQDQDTQIALSPLISLADEIAQIKNITGQEKP
EEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
TVIT
CCCC
>Mature Secondary Structure
MNVQTVVTKPFRDQKPGTSGLRKKVPIFKEPHYLENFIQSIFDSLEGFSGQTFVLGGDGR
CCCCEEEECCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCC
YYNRQAIQIILKMAAANGVGRMLVGQGGILSTPAASCIIRKNQAFGGIILSASHNPGGPE
CCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHEEEECCCCCCCEEEECCCCCCCCC
EDFGVKYNISNGGPAPEKVTSAIYERSKVIDSYKILEAKSINLDQLGSEKLGEMTVEVID
CCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCHHHCCCHHHHHHHHHHHH
SVADYADLMESLFDFGKLSQLLSSGKFRMCMDSLHAVTGPYAKNIFEQRLGAPLGTVKNG
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHCCC
MPLEDFGGGHPDPNLVYAHDLVEIMFGDNAPDFGAASDGDGDRNMILGKNFFVTPSDSLA
CCCHHCCCCCCCCCEEEHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCEEECCCCCEE
ILAANAKLVPGYSSGLTGIARSMPTSAAADRVAEKMGLDCYETPTGWKFFGNLLDADKAT
EEEECCEECCCCCCCHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCHHH
LCGEESFGTGSNHVREKDGLWAVLFWLNILAARQESVEDIVKEHWKTYGRNYYSRHDYEG
HCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
IESDKASTLMENLRSLLPSLPGKQYGQYEVKYADDFRYTDPIDGSVSQKQGIRIGFSDGS
CCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEECCCC
RMVFRLSGTGTQGATLRLYVESYEPDTTKQDQDTQIALSPLISLADEIAQIKNITGQEKP
EEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
TVIT
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7959036; 2307661 [H]