| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is pgm [H]
Identifier: 113474864
GI number: 113474864
Start: 1701534
End: 1703168
Strand: Direct
Name: pgm [H]
Synonym: Tery_1084
Alternate gene names: 113474864
Gene position: 1701534-1703168 (Clockwise)
Preceding gene: 113474863
Following gene: 113474866
Centisome position: 21.95
GC content: 40.18
Gene sequence:
>1635_bases ATGAATGTACAAACAGTTGTAACTAAACCATTTAGGGACCAAAAACCAGGCACTTCTGGACTCCGCAAAAAAGTACCAAT TTTTAAAGAACCCCATTACCTAGAAAACTTTATTCAGTCTATCTTTGACAGTCTAGAAGGTTTTTCGGGTCAAACATTTG TACTTGGTGGTGATGGTCGCTATTACAACCGTCAGGCAATTCAAATAATTCTGAAAATGGCTGCCGCTAATGGAGTTGGT CGAATGTTAGTGGGTCAAGGTGGTATTCTTTCCACCCCTGCTGCTTCCTGCATCATCCGCAAAAATCAAGCCTTTGGTGG TATAATTTTGTCTGCTAGTCACAACCCTGGTGGACCAGAAGAGGACTTTGGTGTTAAGTACAATATTAGTAATGGTGGCC CCGCTCCAGAAAAAGTGACAAGTGCCATTTATGAACGTAGTAAAGTTATAGATAGCTACAAAATTCTTGAAGCTAAGAGT ATTAACTTAGACCAACTAGGTAGTGAGAAGTTAGGGGAAATGACTGTAGAAGTTATTGACTCTGTAGCAGACTACGCTGA TTTGATGGAATCATTGTTTGATTTTGGCAAATTATCACAACTGCTAAGTTCTGGTAAGTTTCGGATGTGTATGGACTCAT TACATGCTGTTACCGGACCTTATGCTAAAAATATTTTTGAGCAACGCTTAGGGGCTCCTCTGGGTACAGTGAAAAATGGT ATGCCTCTGGAAGATTTTGGCGGTGGACATCCCGACCCTAATTTAGTATATGCTCATGACTTGGTAGAAATTATGTTTGG TGATAATGCTCCGGACTTTGGTGCTGCTTCTGATGGGGATGGCGATCGCAACATGATATTAGGGAAAAATTTCTTTGTCA CTCCTAGCGATAGTTTAGCAATATTAGCTGCTAATGCTAAGTTAGTTCCTGGATATAGTTCTGGTTTAACTGGTATTGCT CGTTCCATGCCAACTTCGGCAGCAGCAGACCGAGTAGCAGAGAAAATGGGTCTTGACTGTTATGAAACTCCTACTGGTTG GAAATTTTTTGGTAACTTATTAGATGCGGATAAAGCTACTCTTTGCGGTGAGGAAAGCTTTGGTACAGGGTCTAATCATG TACGGGAAAAAGACGGACTCTGGGCAGTATTATTTTGGTTGAATATTCTGGCAGCAAGGCAAGAGTCAGTAGAAGATATT GTTAAAGAACACTGGAAAACTTACGGTCGCAACTATTATTCTCGCCATGACTATGAAGGGATAGAAAGCGATAAAGCTAG TACTTTGATGGAAAATTTACGTTCTCTATTACCTTCTTTACCAGGAAAACAGTATGGTCAATATGAAGTCAAATATGCTG ATGATTTTCGCTATACGGATCCAATAGATGGTAGCGTGAGTCAGAAACAAGGTATTCGTATTGGTTTCAGTGATGGTTCT CGTATGGTATTCCGACTTTCAGGTACAGGAACTCAGGGAGCAACTCTACGTTTGTATGTTGAAAGTTATGAACCAGATAC TACTAAGCAAGACCAAGATACTCAAATTGCATTATCTCCTCTGATCAGTTTAGCAGATGAAATTGCTCAAATCAAGAATA TTACAGGCCAGGAAAAGCCAACTGTAATTACCTAA
Upstream 100 bases:
>100_bases AGTCAATAATTTAAAGTCAAAAGTTAAAATCTAAGATGAATTGACAATTTATAACTGATAACTGATATATAAATACAGTT GTTAAATTTCTAGAAACCCC
Downstream 100 bases:
>100_bases TTTATAAAGCAGGGAGTATTAGATTTGTCGGTCACTTAAAAAATCACCAAAAACCAAGTTCAGTAAAGATTGTAGCTATT GTGCATCAAGCAAAGCTTAA
Product: phosphoglucomutase
Products: NA
Alternate protein names: PGM; Glucose phosphomutase [H]
Number of amino acids: Translated: 544; Mature: 544
Protein sequence:
>544_residues MNVQTVVTKPFRDQKPGTSGLRKKVPIFKEPHYLENFIQSIFDSLEGFSGQTFVLGGDGRYYNRQAIQIILKMAAANGVG RMLVGQGGILSTPAASCIIRKNQAFGGIILSASHNPGGPEEDFGVKYNISNGGPAPEKVTSAIYERSKVIDSYKILEAKS INLDQLGSEKLGEMTVEVIDSVADYADLMESLFDFGKLSQLLSSGKFRMCMDSLHAVTGPYAKNIFEQRLGAPLGTVKNG MPLEDFGGGHPDPNLVYAHDLVEIMFGDNAPDFGAASDGDGDRNMILGKNFFVTPSDSLAILAANAKLVPGYSSGLTGIA RSMPTSAAADRVAEKMGLDCYETPTGWKFFGNLLDADKATLCGEESFGTGSNHVREKDGLWAVLFWLNILAARQESVEDI VKEHWKTYGRNYYSRHDYEGIESDKASTLMENLRSLLPSLPGKQYGQYEVKYADDFRYTDPIDGSVSQKQGIRIGFSDGS RMVFRLSGTGTQGATLRLYVESYEPDTTKQDQDTQIALSPLISLADEIAQIKNITGQEKPTVIT
Sequences:
>Translated_544_residues MNVQTVVTKPFRDQKPGTSGLRKKVPIFKEPHYLENFIQSIFDSLEGFSGQTFVLGGDGRYYNRQAIQIILKMAAANGVG RMLVGQGGILSTPAASCIIRKNQAFGGIILSASHNPGGPEEDFGVKYNISNGGPAPEKVTSAIYERSKVIDSYKILEAKS INLDQLGSEKLGEMTVEVIDSVADYADLMESLFDFGKLSQLLSSGKFRMCMDSLHAVTGPYAKNIFEQRLGAPLGTVKNG MPLEDFGGGHPDPNLVYAHDLVEIMFGDNAPDFGAASDGDGDRNMILGKNFFVTPSDSLAILAANAKLVPGYSSGLTGIA RSMPTSAAADRVAEKMGLDCYETPTGWKFFGNLLDADKATLCGEESFGTGSNHVREKDGLWAVLFWLNILAARQESVEDI VKEHWKTYGRNYYSRHDYEGIESDKASTLMENLRSLLPSLPGKQYGQYEVKYADDFRYTDPIDGSVSQKQGIRIGFSDGS RMVFRLSGTGTQGATLRLYVESYEPDTTKQDQDTQIALSPLISLADEIAQIKNITGQEKPTVIT >Mature_544_residues MNVQTVVTKPFRDQKPGTSGLRKKVPIFKEPHYLENFIQSIFDSLEGFSGQTFVLGGDGRYYNRQAIQIILKMAAANGVG RMLVGQGGILSTPAASCIIRKNQAFGGIILSASHNPGGPEEDFGVKYNISNGGPAPEKVTSAIYERSKVIDSYKILEAKS INLDQLGSEKLGEMTVEVIDSVADYADLMESLFDFGKLSQLLSSGKFRMCMDSLHAVTGPYAKNIFEQRLGAPLGTVKNG MPLEDFGGGHPDPNLVYAHDLVEIMFGDNAPDFGAASDGDGDRNMILGKNFFVTPSDSLAILAANAKLVPGYSSGLTGIA RSMPTSAAADRVAEKMGLDCYETPTGWKFFGNLLDADKATLCGEESFGTGSNHVREKDGLWAVLFWLNILAARQESVEDI VKEHWKTYGRNYYSRHDYEGIESDKASTLMENLRSLLPSLPGKQYGQYEVKYADDFRYTDPIDGSVSQKQGIRIGFSDGS RMVFRLSGTGTQGATLRLYVESYEPDTTKQDQDTQIALSPLISLADEIAQIKNITGQEKPTVIT
Specific function: This enzyme participates in both the breakdown and synthesis of glucose. Required for the synthesis of capsular polysaccharide and normal lipopolysaccharide [H]
COG id: COG0033
COG function: function code G; Phosphoglucomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphohexose mutase family [H]
Homologues:
Organism=Homo sapiens, GI290463102, Length=558, Percent_Identity=57.3476702508961, Blast_Score=651, Evalue=0.0, Organism=Homo sapiens, GI21361621, Length=562, Percent_Identity=56.0498220640569, Blast_Score=647, Evalue=0.0, Organism=Homo sapiens, GI133922562, Length=561, Percent_Identity=52.0499108734403, Blast_Score=575, Evalue=1e-164, Organism=Homo sapiens, GI290463104, Length=366, Percent_Identity=57.103825136612, Blast_Score=436, Evalue=1e-122, Organism=Homo sapiens, GI239741729, Length=132, Percent_Identity=51.5151515151515, Blast_Score=126, Evalue=4e-29, Organism=Homo sapiens, GI239743670, Length=134, Percent_Identity=48.5074626865672, Blast_Score=123, Evalue=5e-28, Organism=Escherichia coli, GI1786904, Length=425, Percent_Identity=28.2352941176471, Blast_Score=95, Evalue=1e-20, Organism=Caenorhabditis elegans, GI17535441, Length=560, Percent_Identity=52.3214285714286, Blast_Score=575, Evalue=1e-164, Organism=Saccharomyces cerevisiae, GI6323752, Length=571, Percent_Identity=48.5113835376532, Blast_Score=526, Evalue=1e-150, Organism=Saccharomyces cerevisiae, GI6322722, Length=568, Percent_Identity=48.5915492957746, Blast_Score=511, Evalue=1e-146, Organism=Drosophila melanogaster, GI17864244, Length=562, Percent_Identity=51.779359430605, Blast_Score=587, Evalue=1e-168,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005844 - InterPro: IPR016055 - InterPro: IPR005845 - InterPro: IPR005846 - InterPro: IPR005843 - InterPro: IPR016066 - InterPro: IPR005841 [H]
Pfam domain/function: PF02878 PGM_PMM_I; PF02879 PGM_PMM_II; PF02880 PGM_PMM_III; PF00408 PGM_PMM_IV [H]
EC number: =5.4.2.2 [H]
Molecular weight: Translated: 59336; Mature: 59336
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: PS00710 PGM_PMM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVQTVVTKPFRDQKPGTSGLRKKVPIFKEPHYLENFIQSIFDSLEGFSGQTFVLGGDGR CCCCEEEECCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCC YYNRQAIQIILKMAAANGVGRMLVGQGGILSTPAASCIIRKNQAFGGIILSASHNPGGPE CCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHEEEECCCCCCCEEEECCCCCCCCC EDFGVKYNISNGGPAPEKVTSAIYERSKVIDSYKILEAKSINLDQLGSEKLGEMTVEVID CCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCHHHCCCHHHHHHHHHHHH SVADYADLMESLFDFGKLSQLLSSGKFRMCMDSLHAVTGPYAKNIFEQRLGAPLGTVKNG HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHCCC MPLEDFGGGHPDPNLVYAHDLVEIMFGDNAPDFGAASDGDGDRNMILGKNFFVTPSDSLA CCCHHCCCCCCCCCEEEHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCEEECCCCCEE ILAANAKLVPGYSSGLTGIARSMPTSAAADRVAEKMGLDCYETPTGWKFFGNLLDADKAT EEEECCEECCCCCCCHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCHHH LCGEESFGTGSNHVREKDGLWAVLFWLNILAARQESVEDIVKEHWKTYGRNYYSRHDYEG HCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC IESDKASTLMENLRSLLPSLPGKQYGQYEVKYADDFRYTDPIDGSVSQKQGIRIGFSDGS CCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEECCCC RMVFRLSGTGTQGATLRLYVESYEPDTTKQDQDTQIALSPLISLADEIAQIKNITGQEKP EEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC TVIT CCCC >Mature Secondary Structure MNVQTVVTKPFRDQKPGTSGLRKKVPIFKEPHYLENFIQSIFDSLEGFSGQTFVLGGDGR CCCCEEEECCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCC YYNRQAIQIILKMAAANGVGRMLVGQGGILSTPAASCIIRKNQAFGGIILSASHNPGGPE CCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHEEEECCCCCCCEEEECCCCCCCCC EDFGVKYNISNGGPAPEKVTSAIYERSKVIDSYKILEAKSINLDQLGSEKLGEMTVEVID CCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCHHHCCCHHHHHHHHHHHH SVADYADLMESLFDFGKLSQLLSSGKFRMCMDSLHAVTGPYAKNIFEQRLGAPLGTVKNG HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHCCC MPLEDFGGGHPDPNLVYAHDLVEIMFGDNAPDFGAASDGDGDRNMILGKNFFVTPSDSLA CCCHHCCCCCCCCCEEEHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCEEECCCCCEE ILAANAKLVPGYSSGLTGIARSMPTSAAADRVAEKMGLDCYETPTGWKFFGNLLDADKAT EEEECCEECCCCCCCHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCHHH LCGEESFGTGSNHVREKDGLWAVLFWLNILAARQESVEDIVKEHWKTYGRNYYSRHDYEG HCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC IESDKASTLMENLRSLLPSLPGKQYGQYEVKYADDFRYTDPIDGSVSQKQGIRIGFSDGS CCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEECCCC RMVFRLSGTGTQGATLRLYVESYEPDTTKQDQDTQIALSPLISLADEIAQIKNITGQEKP EEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC TVIT CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7959036; 2307661 [H]