| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113474862
Identifier: 113474862
GI number: 113474862
Start: 1699322
End: 1699552
Strand: Reverse
Name: 113474862
Synonym: Tery_1081
Alternate gene names: NA
Gene position: 1699552-1699322 (Counterclockwise)
Preceding gene: 113474865
Following gene: 113474859
Centisome position: 21.93
GC content: 35.06
Gene sequence:
>231_bases TTGATGCGGGGTGTGAGAGTGCAATTAATGACAGGGTATTTCATGTTGTGGAAGATGCTGCTCTATTCTAATGCCGAAAC CTCAGCAACAGTAATTGTTTACAATAGCAACAACGGCAAATTATTCTACAATGCTAATGATATAGAAGCAGAATTTGGAA CTGGTGGTCAATTTATAAATCTAACTAATATTCCATCTATTAGTAAGGATGATTTCCTCATGAGAAAATAA
Upstream 100 bases:
>100_bases ATCTCAGAGAATAAGGAAGATGCTGCTACAGGAGATTTAGATATTATTGCTAGTGGTGGAGAAATAACGGTTATTTCTAA GGGAGAATAAAAGGCTTTTA
Downstream 100 bases:
>100_bases GTGCTAACTACAGAAGTTAAAAAGTTAGACATAATTAGAGCTTGCTGATTAATTCTCAAAGGATGGGCACAAATTATGCT CATAGCCAAATTTTGCCGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 76; Mature: 76
Protein sequence:
>76_residues MMRGVRVQLMTGYFMLWKMLLYSNAETSATVIVYNSNNGKLFYNANDIEAEFGTGGQFINLTNIPSISKDDFLMRK
Sequences:
>Translated_76_residues MMRGVRVQLMTGYFMLWKMLLYSNAETSATVIVYNSNNGKLFYNANDIEAEFGTGGQFINLTNIPSISKDDFLMRK >Mature_76_residues MMRGVRVQLMTGYFMLWKMLLYSNAETSATVIVYNSNNGKLFYNANDIEAEFGTGGQFINLTNIPSISKDDFLMRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8682; Mature: 8682
Theoretical pI: Translated: 8.93; Mature: 8.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 7.9 %Met (Translated Protein) 7.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 7.9 %Met (Mature Protein) 7.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMRGVRVQLMTGYFMLWKMLLYSNAETSATVIVYNSNNGKLFYNANDIEAEFGTGGQFIN CCCCEEEEEHHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEEECCCCEEEECCCCCCEEE LTNIPSISKDDFLMRK ECCCCCCCCCCEEECC >Mature Secondary Structure MMRGVRVQLMTGYFMLWKMLLYSNAETSATVIVYNSNNGKLFYNANDIEAEFGTGGQFIN CCCCEEEEEHHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEEECCCCEEEECCCCCCEEE LTNIPSISKDDFLMRK ECCCCCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA