| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113474852
Identifier: 113474852
GI number: 113474852
Start: 1680863
End: 1681228
Strand: Reverse
Name: 113474852
Synonym: Tery_1071
Alternate gene names: NA
Gene position: 1681228-1680863 (Counterclockwise)
Preceding gene: 113474853
Following gene: 113474848
Centisome position: 21.69
GC content: 30.87
Gene sequence:
>366_bases ATGAATAACCCTAAAAGAGGAGAAGTATGGTTAGTAAAATTAGACCCTACTAGAGGTCAAGAAATAAAAAAAACTCGCCC AGCAATTGTGATTAGTTCAAACATTTTTAGATCAGTAAGTGTTAAAATTATTGTTCCTATAGCTAAATGGCAATCTAAAT TTAAAAACCGTCTATTTATGATTTCGATACCGAAAACTGATGAAAATGGTTTAGATAACGATTCTGCTGGTAATGTGCTT CAAGTTCGTAGTATTGCTAATGAAAGATTTGTGAGATGTCTTGGGCGAGTTTCAAATTCTATTCTTGAAGAGTTACTAGC AGGTTTAATTATCTGTATAGATTATGAATATGATAGTTTAATATGA
Upstream 100 bases:
>100_bases TTATTAACACCATCAATAGATAAAACTGCTGAAGATTTTTTGAATGATCCAGAATTAACAGAGTTTTTTATTCTTGATGG AGAAGATTGGGAAACAGGAG
Downstream 100 bases:
>100_bases GGATATGAATTCCCATTTATTGTGAATAAATTTATTTTGTTTATAAAGTTTGTGGCTTCTTTTGGAACCACGATGACAAT TATGATATAATTTTACTATT
Product: transcriptional modulator of MazE/toxin, MazF
Products: NA
Alternate protein names: Transcriptional Modulator Of Maze/xin Mazf; Transcriptional Modulator Of MazE/xin; PemK-Like Protein
Number of amino acids: Translated: 121; Mature: 121
Protein sequence:
>121_residues MNNPKRGEVWLVKLDPTRGQEIKKTRPAIVISSNIFRSVSVKIIVPIAKWQSKFKNRLFMISIPKTDENGLDNDSAGNVL QVRSIANERFVRCLGRVSNSILEELLAGLIICIDYEYDSLI
Sequences:
>Translated_121_residues MNNPKRGEVWLVKLDPTRGQEIKKTRPAIVISSNIFRSVSVKIIVPIAKWQSKFKNRLFMISIPKTDENGLDNDSAGNVL QVRSIANERFVRCLGRVSNSILEELLAGLIICIDYEYDSLI >Mature_121_residues MNNPKRGEVWLVKLDPTRGQEIKKTRPAIVISSNIFRSVSVKIIVPIAKWQSKFKNRLFMISIPKTDENGLDNDSAGNVL QVRSIANERFVRCLGRVSNSILEELLAGLIICIDYEYDSLI
Specific function: Unknown
COG id: COG2337
COG function: function code T; Growth inhibitor
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13717; Mature: 13717
Theoretical pI: Translated: 9.99; Mature: 9.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNPKRGEVWLVKLDPTRGQEIKKTRPAIVISSNIFRSVSVKIIVPIAKWQSKFKNRLFM CCCCCCCCEEEEEECCCCCCCHHHCCCEEEEECCCCCEEEEEEEEEHHHHHHHHCCCEEE ISIPKTDENGLDNDSAGNVLQVRSIANERFVRCLGRVSNSILEELLAGLIICIDYEYDSL EECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCHHCC I C >Mature Secondary Structure MNNPKRGEVWLVKLDPTRGQEIKKTRPAIVISSNIFRSVSVKIIVPIAKWQSKFKNRLFM CCCCCCCCEEEEEECCCCCCCHHHCCCEEEEECCCCCEEEEEEEEEHHHHHHHHCCCEEE ISIPKTDENGLDNDSAGNVLQVRSIANERFVRCLGRVSNSILEELLAGLIICIDYEYDSL EECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCHHCC I C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA