Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474842

Identifier: 113474842

GI number: 113474842

Start: 1655922

End: 1656212

Strand: Direct

Name: 113474842

Synonym: Tery_1059

Alternate gene names: NA

Gene position: 1655922-1656212 (Clockwise)

Preceding gene: 113474840

Following gene: 113474845

Centisome position: 21.37

GC content: 28.52

Gene sequence:

>291_bases
TTGTACTACAGGTGTCAACAAGAATATTTAAGGAAAAGATTATTGGCAATTAAATACTTGTATGAAAGAAAAACTAGAAC
AGAAGTATCAGATTTATTAAATTGTCATTCTCAAACTTTATCTACTTGGATAGATAAATTTTTAGAAGGAGGATTAAAGA
ATTTACTAGAACTAATGACTCACCAAGTATCATCAAGATTAAATATAGAGCAGAAACAGGAATTAAAAATAATGATACTG
GAAGAATTACCCAGAGATTATGTGGTAGATAGAAACAAATGGAGCTGGTAA

Upstream 100 bases:

>100_bases
TTACATAATAGGTAATAAGGGATGAATCATGATTAAATCTTTAGGGAATAAAACTTTTAGGTTAGGCGATCGCTAATTAA
ATTTAGAATCGTGGCCATAA

Downstream 100 bases:

>100_bases
AATTATTAGTAATGTTATTGAATTAAGATGGGGAGTAAAACTGAAAATAATCGAGAATATATGAAATTTTAAAGAAACTA
AATTTATCAGCTCAAAAAGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 96; Mature: 96

Protein sequence:

>96_residues
MYYRCQQEYLRKRLLAIKYLYERKTRTEVSDLLNCHSQTLSTWIDKFLEGGLKNLLELMTHQVSSRLNIEQKQELKIMIL
EELPRDYVVDRNKWSW

Sequences:

>Translated_96_residues
MYYRCQQEYLRKRLLAIKYLYERKTRTEVSDLLNCHSQTLSTWIDKFLEGGLKNLLELMTHQVSSRLNIEQKQELKIMIL
EELPRDYVVDRNKWSW
>Mature_96_residues
MYYRCQQEYLRKRLLAIKYLYERKTRTEVSDLLNCHSQTLSTWIDKFLEGGLKNLLELMTHQVSSRLNIEQKQELKIMIL
EELPRDYVVDRNKWSW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11783; Mature: 11783

Theoretical pI: Translated: 9.08; Mature: 9.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYYRCQQEYLRKRLLAIKYLYERKTRTEVSDLLNCHSQTLSTWIDKFLEGGLKNLLELMT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HQVSSRLNIEQKQELKIMILEELPRDYVVDRNKWSW
HHHHHHCCCCHHHHHHHHHHHHCCHHHHCCCCCCCC
>Mature Secondary Structure
MYYRCQQEYLRKRLLAIKYLYERKTRTEVSDLLNCHSQTLSTWIDKFLEGGLKNLLELMT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HQVSSRLNIEQKQELKIMILEELPRDYVVDRNKWSW
HHHHHHCCCCHHHHHHHHHHHHCCHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA