Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474815

Identifier: 113474815

GI number: 113474815

Start: 1604273

End: 1604758

Strand: Reverse

Name: 113474815

Synonym: Tery_1028

Alternate gene names: NA

Gene position: 1604758-1604273 (Counterclockwise)

Preceding gene: 113474816

Following gene: 113474812

Centisome position: 20.71

GC content: 34.16

Gene sequence:

>486_bases
GTGGGTTTAATAGAATTTCGCGATCGCCTCATTAATGAAGAACATCAACTCTTAAAATTTGACAGAAAAGTCTTTACAAA
TAATCCCATTCTTTTCCGCCAAAAAGTTGCTAAAATTAAAGCTTATGGAGGGGGAGATGTGCCAGAAAGTAGTTTAGATG
CAGTCATGTTGGCATTGGCTCAACCCTTTGATTTAGAAAGTAATAAAGCTATTGTTTTAGTAACAGATGCTCCTCCACAT
ATTCCAGATAAAAAAACTAAAAATATTGAGGAAGTGGTAACAGCTATTCAAACTACAGGAATAGAACAATTTTATTTAGT
TATTGCCACTCAAGATGCCGAAAGTCAAGTTTATTTAAAGTTATTATCAGGAGTCAAAGGAATGGCATTTGATTTAGGAA
AAGGTGATGATTTCTGCAGTCGTGCTGAAAATTTTAAACGAACTTTAATGTCACTAGGAAAAACTATTTCTACTGCTACA
CGCTGA

Upstream 100 bases:

>100_bases
GTTAGATTGTACTGGCAGTATGCAAGGTGAAATTTATGGGATAAAAGAAACAATCATGGAATTTGCTGATACTATCGAAA
AAGATGGGGTCTGAGTTAGA

Downstream 100 bases:

>100_bases
AAGTCATATTTTTTCCTGACTGTTTGTAATAAGCTAGCATTCTCAAGCTAATTGTGATATTATTATTTTAGATTTACCTG
ACCATATACTAGACTTTTTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 161; Mature: 160

Protein sequence:

>161_residues
MGLIEFRDRLINEEHQLLKFDRKVFTNNPILFRQKVAKIKAYGGGDVPESSLDAVMLALAQPFDLESNKAIVLVTDAPPH
IPDKKTKNIEEVVTAIQTTGIEQFYLVIATQDAESQVYLKLLSGVKGMAFDLGKGDDFCSRAENFKRTLMSLGKTISTAT
R

Sequences:

>Translated_161_residues
MGLIEFRDRLINEEHQLLKFDRKVFTNNPILFRQKVAKIKAYGGGDVPESSLDAVMLALAQPFDLESNKAIVLVTDAPPH
IPDKKTKNIEEVVTAIQTTGIEQFYLVIATQDAESQVYLKLLSGVKGMAFDLGKGDDFCSRAENFKRTLMSLGKTISTAT
R
>Mature_160_residues
GLIEFRDRLINEEHQLLKFDRKVFTNNPILFRQKVAKIKAYGGGDVPESSLDAVMLALAQPFDLESNKAIVLVTDAPPHI
PDKKTKNIEEVVTAIQTTGIEQFYLVIATQDAESQVYLKLLSGVKGMAFDLGKGDDFCSRAENFKRTLMSLGKTISTATR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17906; Mature: 17775

Theoretical pI: Translated: 7.51; Mature: 7.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLIEFRDRLINEEHQLLKFDRKVFTNNPILFRQKVAKIKAYGGGDVPESSLDAVMLALA
CCHHHHHHHHHCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHC
QPFDLESNKAIVLVTDAPPHIPDKKTKNIEEVVTAIQTTGIEQFYLVIATQDAESQVYLK
CCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHH
LLSGVKGMAFDLGKGDDFCSRAENFKRTLMSLGKTISTATR
HHHCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GLIEFRDRLINEEHQLLKFDRKVFTNNPILFRQKVAKIKAYGGGDVPESSLDAVMLALA
CHHHHHHHHHCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHC
QPFDLESNKAIVLVTDAPPHIPDKKTKNIEEVVTAIQTTGIEQFYLVIATQDAESQVYLK
CCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHH
LLSGVKGMAFDLGKGDDFCSRAENFKRTLMSLGKTISTATR
HHHCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA