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The map label for this gene is 113474782

Identifier: 113474782

GI number: 113474782

Start: 1555350

End: 1556627

Strand: Direct

Name: 113474782

Synonym: Tery_0990

Alternate gene names: NA

Gene position: 1555350-1556627 (Clockwise)

Preceding gene: 113474781

Following gene: 113474789

Centisome position: 20.07

GC content: 36.38

Gene sequence:

>1278_bases
ATGGATAAGCGTTTTTTCAATATATTTCCTGGATTAACTGAAGAAAAAGCAATTGCTTTGTTAGAAACACCTCTAGAAGA
ATTAGAAGATAAATCAGACCGTTATATTGCAGCTAGTCATTTAGTTAATTTTCCTAGCGAACGATCAATTAATGCTTTAA
TTAAAACTATACAAGATACAAATCCTGTTTTAGAACAAAAAATTGCTAGACGTAAGGCGATCGAAACATTGGGGCGTTTA
AATGTGGTATCAGCATTGCCCACAATTCGATCTTGTTTGGGTGATGCGGACTGCTACACTACAGAAAATGCTGTTTGGGC
AATTGGCGAAATAGGCACTGAAGACCAAGAAATTCTGGCAGAAATTGCTCAGTTGTTGGAAAAACCTGATCAAAGTTATC
GTTTGATTATTCAGGTGTTAGGAAAGTTTAACTATAAACCTGCAATAACTAAGATTCAGCAGTTTACAGAATATGATGAC
AAACCTATTGCTAGTGCAGCGATCGCTACTATTTGCCGTTTAACGGGGGACTACTCACAAATAACAAAGGTGGTGGAGTT
TTTACAGCACTCTAGTGTTAATGCTAGGCGGGGTTGTATTCAAGATCTGATTGATACTAAATATTATAAGTCGATTCCAA
ATATTGCAAAATGCCCTGTATCCATGGTTTTTCGTCTCCGGGGCATTAGACTTTTAGCACAAGCAGGTATTCCCACAGGT
GAGATTAACTTTGCTGAAATTGAACCCTTTTTAGATTCAGTTATTCGCGACCATCCCAATGATTTAGAATTAGTTCACGA
ATATGACCAAGCTCCAGCCTTAGAATTTGTGATTAAGGAATTATATAGTACAGATTTTGGTAGGTGTTATTTAGCTAGTA
AGACTCTTTTGCAACATTTTGATCCAGAAGTTACAGGTGCAACATTAATGGCAACTTTTGCAGAAAGTGCCCATAATGAT
TATGGTGCTCACTATCATGTAGTTAAACTTTTAGGTTGGCTTAAATATGTTGATGCTTATGATTTGTTGGTAGAAGCACT
TTACAATAAAGCACCTCAGTTTCAAAAATCTCGTGGTGCTGCTGCACTTGCTCTGGCAAATTTGGGAGATGAGCGATCGA
TACCTTTGCTTAGAAAAACTATCAGTGATACAAGAATTTTTGATTTGAAATATGCTTGTTTATTGGCATTAAGACAGTTA
GGAGATAGTCAGACTGCTAAGGTGCTTGTTGATGATTCAGATTTATTGATTCAAACTAAAGCCAAAAGTATGATTTGA

Upstream 100 bases:

>100_bases
TATCTCTACAAAGGTTTTAGTGTATCTTTATGCCCCAAACTGCTATATGATTTATTCAATCAAGAAATTAATTGTTGATT
GTAATTAACATAGACTGAAA

Downstream 100 bases:

>100_bases
GTTGTAATGTTTTAGTAAGGATAAGGGGTAGAGATGTTGCATAAACATCTTTCTCCGAATTCAAAAAATATCCTTATGAC
TCGTTTCCAAGTAACCTGAA

Product: HEAT repeat-containing PBS lyase

Products: NA

Alternate protein names: ORF Y [H]

Number of amino acids: Translated: 425; Mature: 425

Protein sequence:

>425_residues
MDKRFFNIFPGLTEEKAIALLETPLEELEDKSDRYIAASHLVNFPSERSINALIKTIQDTNPVLEQKIARRKAIETLGRL
NVVSALPTIRSCLGDADCYTTENAVWAIGEIGTEDQEILAEIAQLLEKPDQSYRLIIQVLGKFNYKPAITKIQQFTEYDD
KPIASAAIATICRLTGDYSQITKVVEFLQHSSVNARRGCIQDLIDTKYYKSIPNIAKCPVSMVFRLRGIRLLAQAGIPTG
EINFAEIEPFLDSVIRDHPNDLELVHEYDQAPALEFVIKELYSTDFGRCYLASKTLLQHFDPEVTGATLMATFAESAHND
YGAHYHVVKLLGWLKYVDAYDLLVEALYNKAPQFQKSRGAAALALANLGDERSIPLLRKTISDTRIFDLKYACLLALRQL
GDSQTAKVLVDDSDLLIQTKAKSMI

Sequences:

>Translated_425_residues
MDKRFFNIFPGLTEEKAIALLETPLEELEDKSDRYIAASHLVNFPSERSINALIKTIQDTNPVLEQKIARRKAIETLGRL
NVVSALPTIRSCLGDADCYTTENAVWAIGEIGTEDQEILAEIAQLLEKPDQSYRLIIQVLGKFNYKPAITKIQQFTEYDD
KPIASAAIATICRLTGDYSQITKVVEFLQHSSVNARRGCIQDLIDTKYYKSIPNIAKCPVSMVFRLRGIRLLAQAGIPTG
EINFAEIEPFLDSVIRDHPNDLELVHEYDQAPALEFVIKELYSTDFGRCYLASKTLLQHFDPEVTGATLMATFAESAHND
YGAHYHVVKLLGWLKYVDAYDLLVEALYNKAPQFQKSRGAAALALANLGDERSIPLLRKTISDTRIFDLKYACLLALRQL
GDSQTAKVLVDDSDLLIQTKAKSMI
>Mature_425_residues
MDKRFFNIFPGLTEEKAIALLETPLEELEDKSDRYIAASHLVNFPSERSINALIKTIQDTNPVLEQKIARRKAIETLGRL
NVVSALPTIRSCLGDADCYTTENAVWAIGEIGTEDQEILAEIAQLLEKPDQSYRLIIQVLGKFNYKPAITKIQQFTEYDD
KPIASAAIATICRLTGDYSQITKVVEFLQHSSVNARRGCIQDLIDTKYYKSIPNIAKCPVSMVFRLRGIRLLAQAGIPTG
EINFAEIEPFLDSVIRDHPNDLELVHEYDQAPALEFVIKELYSTDFGRCYLASKTLLQHFDPEVTGATLMATFAESAHND
YGAHYHVVKLLGWLKYVDAYDLLVEALYNKAPQFQKSRGAAALALANLGDERSIPLLRKTISDTRIFDLKYACLLALRQL
GDSQTAKVLVDDSDLLIQTKAKSMI

Specific function: Unknown

COG id: COG1413

COG function: function code C; FOG: HEAT repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011989
- InterPro:   IPR016024
- InterPro:   IPR004155 [H]

Pfam domain/function: PF03130 HEAT_PBS [H]

EC number: NA

Molecular weight: Translated: 47652; Mature: 47652

Theoretical pI: Translated: 5.35; Mature: 5.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKRFFNIFPGLTEEKAIALLETPLEELEDKSDRYIAASHLVNFPSERSINALIKTIQDT
CCCCCEECCCCCCHHHHHHHHHHHHHHHCCCCCCEEHHHHHHCCCCCCHHHHHHHHHHCC
NPVLEQKIARRKAIETLGRLNVVSALPTIRSCLGDADCYTTENAVWAIGEIGTEDQEILA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCEEEECCCCCCHHHHHH
EIAQLLEKPDQSYRLIIQVLGKFNYKPAITKIQQFTEYDDKPIASAAIATICRLTGDYSQ
HHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHH
ITKVVEFLQHSSVNARRGCIQDLIDTKYYKSIPNIAKCPVSMVFRLRGIRLLAQAGIPTG
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
EINFAEIEPFLDSVIRDHPNDLELVHEYDQAPALEFVIKELYSTDFGRCYLASKTLLQHF
CCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHC
DPEVTGATLMATFAESAHNDYGAHYHVVKLLGWLKYVDAYDLLVEALYNKAPQFQKSRGA
CCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCC
AALALANLGDERSIPLLRKTISDTRIFDLKYACLLALRQLGDSQTAKVLVDDSDLLIQTK
HHHHHHHCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEECC
AKSMI
HHHCC
>Mature Secondary Structure
MDKRFFNIFPGLTEEKAIALLETPLEELEDKSDRYIAASHLVNFPSERSINALIKTIQDT
CCCCCEECCCCCCHHHHHHHHHHHHHHHCCCCCCEEHHHHHHCCCCCCHHHHHHHHHHCC
NPVLEQKIARRKAIETLGRLNVVSALPTIRSCLGDADCYTTENAVWAIGEIGTEDQEILA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCEEEECCCCCCHHHHHH
EIAQLLEKPDQSYRLIIQVLGKFNYKPAITKIQQFTEYDDKPIASAAIATICRLTGDYSQ
HHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHH
ITKVVEFLQHSSVNARRGCIQDLIDTKYYKSIPNIAKCPVSMVFRLRGIRLLAQAGIPTG
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
EINFAEIEPFLDSVIRDHPNDLELVHEYDQAPALEFVIKELYSTDFGRCYLASKTLLQHF
CCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHC
DPEVTGATLMATFAESAHNDYGAHYHVVKLLGWLKYVDAYDLLVEALYNKAPQFQKSRGA
CCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCC
AALALANLGDERSIPLLRKTISDTRIFDLKYACLLALRQLGDSQTAKVLVDDSDLLIQTK
HHHHHHHCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEECC
AKSMI
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1809846 [H]