| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is yahD [C]
Identifier: 113474780
GI number: 113474780
Start: 1553319
End: 1553792
Strand: Reverse
Name: yahD [C]
Synonym: Tery_0988
Alternate gene names: 113474780
Gene position: 1553792-1553319 (Counterclockwise)
Preceding gene: 113474783
Following gene: 113474779
Centisome position: 20.05
GC content: 37.13
Gene sequence:
>474_bases ATGGATACCAATGATAAATTGATAGAAGCGGCTAAAAAGGGTCATGTTGATCTAGTACAAACTTTGCTTGTACAAGCTGA TAATATAGATGCTACAGACATCATCTTTAATAGGACAGCTTTGATGTGGGCGGCTCGACAAGGAGAAACTGCCACCGTTA AAATTCTGCTAGCTCTAGGAGCAGATATTAATGCTGCCGATAAATATGGTGTTACAGCCTTACAAGCATCCGCTTCTTTT GGTCATACTGTAACAGTTAAAACTATTCTTGAATATGAAGCAAATATTAATGTTCAAGATGCTCGAGGATGGACTGCTTT AATGATGGCTGTTGCCCATAATCATCCTGACACAGTGCAAGTGTTGCTAGAAAATAAAGCCCGAAAAGATATTCAGGAAG AGAATGGTTTAACGGCATTGATTATGGCTCAAAAATACAATTATTCTGATATGGTAGAATTATTAAAATCTTGA
Upstream 100 bases:
>100_bases TTCAATATCCGAGGTGAAAAGTTTTGGATAAATGGTATAAGTTAATTCAAGGAATTAGCTACAAATACTACCAACTTAAA CTTATAAATGAATAGGAAAA
Downstream 100 bases:
>100_bases TTGATTGATTATTAATTTTTCATGGTTAATATTTCTGAGAAATTACCAGACCCCATAGAAACTGAACAATTATTAAAACA AATTAATGAACAACTTACCC
Product: ankyrin
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 157; Mature: 157
Protein sequence:
>157_residues MDTNDKLIEAAKKGHVDLVQTLLVQADNIDATDIIFNRTALMWAARQGETATVKILLALGADINAADKYGVTALQASASF GHTVTVKTILEYEANINVQDARGWTALMMAVAHNHPDTVQVLLENKARKDIQEENGLTALIMAQKYNYSDMVELLKS
Sequences:
>Translated_157_residues MDTNDKLIEAAKKGHVDLVQTLLVQADNIDATDIIFNRTALMWAARQGETATVKILLALGADINAADKYGVTALQASASF GHTVTVKTILEYEANINVQDARGWTALMMAVAHNHPDTVQVLLENKARKDIQEENGLTALIMAQKYNYSDMVELLKS >Mature_157_residues MDTNDKLIEAAKKGHVDLVQTLLVQADNIDATDIIFNRTALMWAARQGETATVKILLALGADINAADKYGVTALQASASF GHTVTVKTILEYEANINVQDARGWTALMMAVAHNHPDTVQVLLENKARKDIQEENGLTALIMAQKYNYSDMVELLKS
Specific function: Unknown
COG id: COG0666
COG function: function code R; FOG: Ankyrin repeat
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 8 ANK repeats [H]
Homologues:
Organism=Homo sapiens, GI55741641, Length=149, Percent_Identity=37.5838926174497, Blast_Score=95, Evalue=3e-20, Organism=Homo sapiens, GI34304381, Length=148, Percent_Identity=35.1351351351351, Blast_Score=84, Evalue=3e-17, Organism=Homo sapiens, GI52426735, Length=154, Percent_Identity=34.4155844155844, Blast_Score=84, Evalue=4e-17, Organism=Homo sapiens, GI34304379, Length=148, Percent_Identity=35.1351351351351, Blast_Score=84, Evalue=8e-17, Organism=Homo sapiens, GI70995267, Length=153, Percent_Identity=33.9869281045752, Blast_Score=82, Evalue=2e-16, Organism=Homo sapiens, GI188595682, Length=154, Percent_Identity=34.4155844155844, Blast_Score=82, Evalue=3e-16, Organism=Homo sapiens, GI52426737, Length=154, Percent_Identity=34.4155844155844, Blast_Score=82, Evalue=3e-16, Organism=Homo sapiens, GI268607595, Length=152, Percent_Identity=36.8421052631579, Blast_Score=81, Evalue=4e-16, Organism=Homo sapiens, GI62988328, Length=151, Percent_Identity=37.0860927152318, Blast_Score=81, Evalue=4e-16, Organism=Homo sapiens, GI157739945, Length=151, Percent_Identity=36.4238410596026, Blast_Score=79, Evalue=1e-15, Organism=Homo sapiens, GI41327752, Length=137, Percent_Identity=35.036496350365, Blast_Score=78, Evalue=3e-15, Organism=Homo sapiens, GI70780353, Length=142, Percent_Identity=36.6197183098592, Blast_Score=78, Evalue=3e-15, Organism=Homo sapiens, GI70780355, Length=142, Percent_Identity=36.6197183098592, Blast_Score=78, Evalue=3e-15, Organism=Homo sapiens, GI215598574, Length=142, Percent_Identity=36.6197183098592, Blast_Score=78, Evalue=4e-15, Organism=Homo sapiens, GI32967601, Length=147, Percent_Identity=31.9727891156463, Blast_Score=77, Evalue=4e-15, Organism=Homo sapiens, GI16975496, Length=153, Percent_Identity=33.9869281045752, Blast_Score=77, Evalue=5e-15, Organism=Homo sapiens, GI38683816, Length=147, Percent_Identity=35.3741496598639, Blast_Score=77, Evalue=9e-15, Organism=Homo sapiens, GI70780357, Length=146, Percent_Identity=36.3013698630137, Blast_Score=76, Evalue=1e-14, Organism=Homo sapiens, GI70780359, Length=146, Percent_Identity=36.3013698630137, Blast_Score=76, Evalue=1e-14, Organism=Homo sapiens, GI30425444, Length=147, Percent_Identity=32.6530612244898, Blast_Score=76, Evalue=1e-14, Organism=Homo sapiens, GI38683807, Length=147, Percent_Identity=35.3741496598639, Blast_Score=76, Evalue=1e-14, Organism=Homo sapiens, GI148596917, Length=154, Percent_Identity=33.1168831168831, Blast_Score=75, Evalue=3e-14, Organism=Homo sapiens, GI37620163, Length=150, Percent_Identity=34, Blast_Score=75, Evalue=3e-14, Organism=Homo sapiens, GI46519147, Length=150, Percent_Identity=34, Blast_Score=74, Evalue=4e-14, Organism=Homo sapiens, GI89363047, Length=149, Percent_Identity=30.8724832214765, Blast_Score=74, Evalue=4e-14, Organism=Homo sapiens, GI225543461, Length=149, Percent_Identity=34.8993288590604, Blast_Score=74, Evalue=6e-14, Organism=Homo sapiens, GI24233530, Length=157, Percent_Identity=36.9426751592357, Blast_Score=74, Evalue=8e-14, Organism=Homo sapiens, GI225543463, Length=149, Percent_Identity=34.8993288590604, Blast_Score=73, Evalue=8e-14, Organism=Homo sapiens, GI55742857, Length=146, Percent_Identity=32.8767123287671, Blast_Score=72, Evalue=2e-13, Organism=Homo sapiens, GI30348954, Length=131, Percent_Identity=35.8778625954198, Blast_Score=72, Evalue=2e-13, Organism=Homo sapiens, GI68131557, Length=152, Percent_Identity=33.5526315789474, Blast_Score=71, Evalue=3e-13, Organism=Homo sapiens, GI304361760, Length=152, Percent_Identity=33.5526315789474, Blast_Score=71, Evalue=3e-13, Organism=Homo sapiens, GI304361757, Length=152, Percent_Identity=33.5526315789474, Blast_Score=71, Evalue=3e-13, Organism=Homo sapiens, GI224465233, Length=147, Percent_Identity=32.6530612244898, Blast_Score=71, Evalue=4e-13, Organism=Homo sapiens, GI12746412, Length=147, Percent_Identity=33.3333333333333, Blast_Score=70, Evalue=8e-13, Organism=Homo sapiens, GI283549153, Length=146, Percent_Identity=35.6164383561644, Blast_Score=70, Evalue=8e-13, Organism=Homo sapiens, GI41327754, Length=148, Percent_Identity=32.4324324324324, Blast_Score=70, Evalue=1e-12, Organism=Homo sapiens, GI116875852, Length=146, Percent_Identity=32.1917808219178, Blast_Score=69, Evalue=2e-12, Organism=Homo sapiens, GI4506499, Length=146, Percent_Identity=30.8219178082192, Blast_Score=68, Evalue=3e-12, Organism=Homo sapiens, GI7657265, Length=148, Percent_Identity=35.1351351351351, Blast_Score=68, Evalue=4e-12, Organism=Homo sapiens, GI96975023, Length=151, Percent_Identity=31.1258278145695, Blast_Score=68, Evalue=4e-12, Organism=Homo sapiens, GI126723390, Length=153, Percent_Identity=27.4509803921569, Blast_Score=67, Evalue=5e-12, Organism=Homo sapiens, GI8051597, Length=156, Percent_Identity=31.4102564102564, Blast_Score=67, Evalue=8e-12, Organism=Homo sapiens, GI32483404, Length=156, Percent_Identity=31.4102564102564, Blast_Score=67, Evalue=8e-12, Organism=Homo sapiens, GI8051599, Length=156, Percent_Identity=31.4102564102564, Blast_Score=67, Evalue=8e-12, Organism=Homo sapiens, GI8051595, Length=156, Percent_Identity=31.4102564102564, Blast_Score=67, Evalue=9e-12, Organism=Homo sapiens, GI8051593, Length=156, Percent_Identity=31.4102564102564, Blast_Score=66, Evalue=1e-11, Organism=Homo sapiens, GI42734375, Length=152, Percent_Identity=31.5789473684211, Blast_Score=66, Evalue=1e-11, Organism=Homo sapiens, GI116063534, Length=120, Percent_Identity=33.3333333333333, Blast_Score=66, Evalue=1e-11, Organism=Homo sapiens, GI310120310, Length=146, Percent_Identity=35.6164383561644, Blast_Score=66, Evalue=1e-11, Organism=Homo sapiens, GI310128938, Length=146, Percent_Identity=35.6164383561644, Blast_Score=66, Evalue=1e-11, Organism=Homo sapiens, GI87239981, Length=139, Percent_Identity=33.8129496402878, Blast_Score=66, Evalue=2e-11, Organism=Homo sapiens, GI224809478, Length=146, Percent_Identity=29.4520547945205, Blast_Score=65, Evalue=2e-11, Organism=Homo sapiens, GI224809476, Length=146, Percent_Identity=29.4520547945205, Blast_Score=65, Evalue=2e-11, Organism=Homo sapiens, GI224809472, Length=146, Percent_Identity=29.4520547945205, Blast_Score=65, Evalue=2e-11, Organism=Homo sapiens, GI224809470, Length=146, Percent_Identity=29.4520547945205, Blast_Score=65, Evalue=2e-11, Organism=Homo sapiens, GI224809468, Length=146, Percent_Identity=29.4520547945205, Blast_Score=65, Evalue=2e-11, Organism=Homo sapiens, GI310124281, Length=146, Percent_Identity=32.8767123287671, Blast_Score=65, Evalue=2e-11, Organism=Homo sapiens, GI224809474, Length=146, Percent_Identity=29.4520547945205, Blast_Score=65, Evalue=2e-11, Organism=Homo sapiens, GI46519151, Length=130, Percent_Identity=36.9230769230769, Blast_Score=65, Evalue=2e-11, Organism=Homo sapiens, GI46519154, Length=130, Percent_Identity=36.9230769230769, Blast_Score=65, Evalue=2e-11, Organism=Homo sapiens, GI67906195, Length=131, Percent_Identity=32.0610687022901, Blast_Score=65, Evalue=2e-11, Organism=Homo sapiens, GI157743284, Length=135, Percent_Identity=37.037037037037, Blast_Score=64, Evalue=4e-11, Organism=Homo sapiens, GI19924156, Length=118, Percent_Identity=33.0508474576271, Blast_Score=64, Evalue=5e-11, Organism=Homo sapiens, GI17864094, Length=145, Percent_Identity=32.4137931034483, Blast_Score=64, Evalue=6e-11, Organism=Homo sapiens, GI153792284, Length=146, Percent_Identity=32.8767123287671, Blast_Score=64, Evalue=6e-11, Organism=Homo sapiens, GI239747114, Length=146, Percent_Identity=32.8767123287671, Blast_Score=64, Evalue=6e-11, Organism=Homo sapiens, GI13376842, Length=138, Percent_Identity=33.3333333333333, Blast_Score=63, Evalue=8e-11, Organism=Homo sapiens, GI222537750, Length=146, Percent_Identity=32.8767123287671, Blast_Score=63, Evalue=9e-11, Organism=Homo sapiens, GI56550047, Length=153, Percent_Identity=26.797385620915, Blast_Score=63, Evalue=9e-11, Organism=Homo sapiens, GI59850762, Length=153, Percent_Identity=26.797385620915, Blast_Score=63, Evalue=1e-10, Organism=Caenorhabditis elegans, GI212646035, Length=149, Percent_Identity=35.5704697986577, Blast_Score=85, Evalue=1e-17, Organism=Caenorhabditis elegans, GI212646031, Length=149, Percent_Identity=35.5704697986577, Blast_Score=85, Evalue=2e-17, Organism=Caenorhabditis elegans, GI212646033, Length=149, Percent_Identity=35.5704697986577, Blast_Score=85, Evalue=2e-17, Organism=Caenorhabditis elegans, GI115533596, Length=151, Percent_Identity=33.7748344370861, Blast_Score=77, Evalue=4e-15, Organism=Caenorhabditis elegans, GI71981411, Length=149, Percent_Identity=30.2013422818792, Blast_Score=75, Evalue=1e-14, Organism=Caenorhabditis elegans, GI212645194, Length=147, Percent_Identity=33.3333333333333, Blast_Score=75, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17542700, Length=149, Percent_Identity=30.2013422818792, Blast_Score=75, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17555340, Length=151, Percent_Identity=35.0993377483444, Blast_Score=73, Evalue=6e-14, Organism=Caenorhabditis elegans, GI71981414, Length=149, Percent_Identity=30.2013422818792, Blast_Score=72, Evalue=1e-13, Organism=Caenorhabditis elegans, GI25145251, Length=149, Percent_Identity=30.2013422818792, Blast_Score=72, Evalue=1e-13, Organism=Caenorhabditis elegans, GI71981389, Length=149, Percent_Identity=30.2013422818792, Blast_Score=72, Evalue=1e-13, Organism=Caenorhabditis elegans, GI193206531, Length=152, Percent_Identity=31.5789473684211, Blast_Score=63, Evalue=8e-11, Organism=Caenorhabditis elegans, GI193206533, Length=152, Percent_Identity=31.5789473684211, Blast_Score=63, Evalue=8e-11, Organism=Caenorhabditis elegans, GI17541900, Length=152, Percent_Identity=31.5789473684211, Blast_Score=62, Evalue=1e-10, Organism=Caenorhabditis elegans, GI17541898, Length=152, Percent_Identity=31.5789473684211, Blast_Score=62, Evalue=1e-10, Organism=Drosophila melanogaster, GI221330478, Length=145, Percent_Identity=35.1724137931034, Blast_Score=89, Evalue=1e-18, Organism=Drosophila melanogaster, GI221330474, Length=145, Percent_Identity=35.1724137931034, Blast_Score=89, Evalue=1e-18, Organism=Drosophila melanogaster, GI45551135, Length=149, Percent_Identity=34.8993288590604, Blast_Score=89, Evalue=1e-18, Organism=Drosophila melanogaster, GI45550479, Length=149, Percent_Identity=34.8993288590604, Blast_Score=89, Evalue=1e-18, Organism=Drosophila melanogaster, GI221330480, Length=149, Percent_Identity=34.8993288590604, Blast_Score=89, Evalue=1e-18, Organism=Drosophila melanogaster, GI281363919, Length=149, Percent_Identity=34.8993288590604, Blast_Score=89, Evalue=1e-18, Organism=Drosophila melanogaster, GI221330476, Length=149, Percent_Identity=34.8993288590604, Blast_Score=89, Evalue=2e-18, Organism=Drosophila melanogaster, GI221330482, Length=149, Percent_Identity=34.8993288590604, Blast_Score=89, Evalue=2e-18, Organism=Drosophila melanogaster, GI28573593, Length=149, Percent_Identity=34.8993288590604, Blast_Score=89, Evalue=2e-18, Organism=Drosophila melanogaster, GI28571867, Length=151, Percent_Identity=35.7615894039735, Blast_Score=79, Evalue=9e-16, Organism=Drosophila melanogaster, GI28571865, Length=151, Percent_Identity=35.7615894039735, Blast_Score=79, Evalue=9e-16, Organism=Drosophila melanogaster, GI161082110, Length=155, Percent_Identity=34.8387096774194, Blast_Score=79, Evalue=2e-15, Organism=Drosophila melanogaster, GI161082081, Length=155, Percent_Identity=34.8387096774194, Blast_Score=78, Evalue=2e-15, Organism=Drosophila melanogaster, GI161082096, Length=155, Percent_Identity=34.8387096774194, Blast_Score=78, Evalue=2e-15, Organism=Drosophila melanogaster, GI161082106, Length=155, Percent_Identity=34.8387096774194, Blast_Score=78, Evalue=2e-15, Organism=Drosophila melanogaster, GI161082089, Length=155, Percent_Identity=34.8387096774194, Blast_Score=77, Evalue=3e-15, Organism=Drosophila melanogaster, GI161082092, Length=155, Percent_Identity=34.8387096774194, Blast_Score=77, Evalue=4e-15, Organism=Drosophila melanogaster, GI161082085, Length=155, Percent_Identity=34.8387096774194, Blast_Score=76, Evalue=8e-15, Organism=Drosophila melanogaster, GI161082099, Length=155, Percent_Identity=34.8387096774194, Blast_Score=76, Evalue=8e-15, Organism=Drosophila melanogaster, GI20129611, Length=152, Percent_Identity=32.2368421052632, Blast_Score=74, Evalue=6e-14, Organism=Drosophila melanogaster, GI45550629, Length=150, Percent_Identity=34.6666666666667, Blast_Score=72, Evalue=2e-13, Organism=Drosophila melanogaster, GI281359521, Length=148, Percent_Identity=36.4864864864865, Blast_Score=72, Evalue=2e-13, Organism=Drosophila melanogaster, GI281359519, Length=148, Percent_Identity=36.4864864864865, Blast_Score=72, Evalue=2e-13, Organism=Drosophila melanogaster, GI28558752, Length=148, Percent_Identity=36.4864864864865, Blast_Score=72, Evalue=2e-13, Organism=Drosophila melanogaster, GI28558750, Length=148, Percent_Identity=36.4864864864865, Blast_Score=72, Evalue=2e-13, Organism=Drosophila melanogaster, GI28558756, Length=148, Percent_Identity=36.4864864864865, Blast_Score=72, Evalue=2e-13, Organism=Drosophila melanogaster, GI28558754, Length=148, Percent_Identity=36.4864864864865, Blast_Score=72, Evalue=2e-13, Organism=Drosophila melanogaster, GI281364448, Length=124, Percent_Identity=37.0967741935484, Blast_Score=71, Evalue=3e-13, Organism=Drosophila melanogaster, GI85724882, Length=124, Percent_Identity=37.0967741935484, Blast_Score=71, Evalue=3e-13, Organism=Drosophila melanogaster, GI24581838, Length=124, Percent_Identity=37.0967741935484, Blast_Score=71, Evalue=3e-13, Organism=Drosophila melanogaster, GI24581840, Length=124, Percent_Identity=37.0967741935484, Blast_Score=71, Evalue=3e-13, Organism=Drosophila melanogaster, GI24581836, Length=124, Percent_Identity=37.0967741935484, Blast_Score=71, Evalue=3e-13, Organism=Drosophila melanogaster, GI24583835, Length=148, Percent_Identity=33.1081081081081, Blast_Score=67, Evalue=4e-12, Organism=Drosophila melanogaster, GI21356741, Length=157, Percent_Identity=29.9363057324841, Blast_Score=66, Evalue=8e-12, Organism=Drosophila melanogaster, GI24650843, Length=149, Percent_Identity=30.8724832214765, Blast_Score=65, Evalue=2e-11, Organism=Drosophila melanogaster, GI19921030, Length=119, Percent_Identity=36.9747899159664, Blast_Score=64, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002110 - InterPro: IPR020683 [H]
Pfam domain/function: PF00023 Ank [H]
EC number: NA
Molecular weight: Translated: 17199; Mature: 17199
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: PS50088 ANK_REPEAT ; PS50297 ANK_REP_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTNDKLIEAAKKGHVDLVQTLLVQADNIDATDIIFNRTALMWAARQGETATVKILLALG CCCCHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHEEECCCCCCEEEEEEEEEC ADINAADKYGVTALQASASFGHTVTVKTILEYEANINVQDARGWTALMMAVAHNHPDTVQ CCCCCCCCCCCEEEECCCCCCCEEEEEEEEEHHCCCCEECCCCHHHHHHHHHCCCCHHHH VLLENKARKDIQEENGLTALIMAQKYNYSDMVELLKS HHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHC >Mature Secondary Structure MDTNDKLIEAAKKGHVDLVQTLLVQADNIDATDIIFNRTALMWAARQGETATVKILLALG CCCCHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHEEECCCCCCEEEEEEEEEC ADINAADKYGVTALQASASFGHTVTVKTILEYEANINVQDARGWTALMMAVAHNHPDTVQ CCCCCCCCCCCEEEECCCCCCCEEEEEEEEEHHCCCCEECCCCHHHHHHHHHCCCCHHHH VLLENKARKDIQEENGLTALIMAQKYNYSDMVELLKS HHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8390993 [H]