Click here to switch to the map view.

The map label for this gene is pqqL [C]

Identifier: 113474762

GI number: 113474762

Start: 1519889

End: 1521130

Strand: Direct

Name: pqqL [C]

Synonym: Tery_0966

Alternate gene names: 113474762

Gene position: 1519889-1521130 (Clockwise)

Preceding gene: 113474759

Following gene: 113474763

Centisome position: 19.61

GC content: 31.72

Gene sequence:

>1242_bases
ATGATTAATCAAACAAATATAAATCGAACAGTTTTAAATAATGGCATAGTTGTAATTACAGCAGAAAATACAGTTGCTGA
TATTGTATCAGCCAAAATATTCTTGGGAATAGGTAGTAGTTATGAAGCTAAAAACCAAGCTGGAATTTCACACTTATTAG
CAGCAGTTTTGACAAAAGGAACAAAAAAATTATCGTCTTTAGATATTGCTTTAAAAATTGAATCAGTAGGAGCAAGATTA
GGAAGTGATACAACAGCAGATTATTTTTTGCTGAGTATAAAAACAGTATCAGAAGACTTTAATGATATCTTTCAATTATC
AGGAGAAATAATCAGATGTCCCTCCTTCCCAGAAACAGAAATTGAGTTAGAAAAACGGATTACCATTCAAAGTATTCGTT
CCCAACTAGAACAACCTTTTACTGTAGCATTCTCTCAACTACGAGAGATGATGTATCAAGATCATCCTTATGCTTTATCA
ACTTTAGGCACAGAAAATACAGTATCTCAAATTACCCGCTACGACATTCAAAAATTTTATGAAACTTACTTCCGTCCAGA
TAATATAGTAATATCTATAGTAGGTAAAATTAGTAATGCAAAAGCCATTGCTTTAGTTGAACAAATTTATGGAGATTGGC
AACCACCAAGAACACTTCTACCAACTTTAAATTTACCAAGAATAACTCCTCAACCTTTCACAGCAAAAAAATATCAAGAA
ACTCAACAATCTATTATTATGCTTGGGTATTTGGCAGCAAATGTTAATAGTTCTGACTACGCTCCTCTAAAATTACTTAA
TACTTATTTGGGAAATGGCTTATCAAGTCGTTTATTTGTAGAACTAAGAGAAAAAAGAGGTTTAGCTTACGATGTTTCTG
CATTTTACCCTACCCGTCTCTATACTTCTAACTTTACAGTTTATATAGGTACGGCAGGAGAAAATACAGCGATCGCTAAG
GCAGGATTAAAATCAGAAATAGAACGCTTAGTTACTGAATTACTCAGTGAAGAAGAGTTAGAAATATCCAAAAACAAATT
ATTAGGTCAGTATGCTTTGGGCAAACAAACAAATTCACAAATAGCTCAAATTTTAGGATGGTATGAAATCTTAAATTTGG
GCATAGATTTTGATGCTAAATTTCAAAAAAATCTGGAAATGGTAACAACCTTAGACACACAAAAAGTTGCTATTAAATAC
TTTATTGAACCTTACATTTCAATTGTTGGAAAGGAAAAATAA

Upstream 100 bases:

>100_bases
TTAAGTAATATAGGGTTTCTCAAGTGACTGAAGTCAAGTTGTTTTTCTTTTTTTATTCTCCTACTCCCTTACTCCCTAAT
TCCTAATCCCTTTTCTCAAA

Downstream 100 bases:

>100_bases
TGACTAACAGAGGTCATTGTCTAGGAATAGTCTTAATTGATTCTGGCTTAGGTAATAAGAGACTGTTTCTCAAAAAAAAG
CTAAAGGTGGCCATGAATAA

Product: peptidase M16-like

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 413; Mature: 413

Protein sequence:

>413_residues
MINQTNINRTVLNNGIVVITAENTVADIVSAKIFLGIGSSYEAKNQAGISHLLAAVLTKGTKKLSSLDIALKIESVGARL
GSDTTADYFLLSIKTVSEDFNDIFQLSGEIIRCPSFPETEIELEKRITIQSIRSQLEQPFTVAFSQLREMMYQDHPYALS
TLGTENTVSQITRYDIQKFYETYFRPDNIVISIVGKISNAKAIALVEQIYGDWQPPRTLLPTLNLPRITPQPFTAKKYQE
TQQSIIMLGYLAANVNSSDYAPLKLLNTYLGNGLSSRLFVELREKRGLAYDVSAFYPTRLYTSNFTVYIGTAGENTAIAK
AGLKSEIERLVTELLSEEELEISKNKLLGQYALGKQTNSQIAQILGWYEILNLGIDFDAKFQKNLEMVTTLDTQKVAIKY
FIEPYISIVGKEK

Sequences:

>Translated_413_residues
MINQTNINRTVLNNGIVVITAENTVADIVSAKIFLGIGSSYEAKNQAGISHLLAAVLTKGTKKLSSLDIALKIESVGARL
GSDTTADYFLLSIKTVSEDFNDIFQLSGEIIRCPSFPETEIELEKRITIQSIRSQLEQPFTVAFSQLREMMYQDHPYALS
TLGTENTVSQITRYDIQKFYETYFRPDNIVISIVGKISNAKAIALVEQIYGDWQPPRTLLPTLNLPRITPQPFTAKKYQE
TQQSIIMLGYLAANVNSSDYAPLKLLNTYLGNGLSSRLFVELREKRGLAYDVSAFYPTRLYTSNFTVYIGTAGENTAIAK
AGLKSEIERLVTELLSEEELEISKNKLLGQYALGKQTNSQIAQILGWYEILNLGIDFDAKFQKNLEMVTTLDTQKVAIKY
FIEPYISIVGKEK
>Mature_413_residues
MINQTNINRTVLNNGIVVITAENTVADIVSAKIFLGIGSSYEAKNQAGISHLLAAVLTKGTKKLSSLDIALKIESVGARL
GSDTTADYFLLSIKTVSEDFNDIFQLSGEIIRCPSFPETEIELEKRITIQSIRSQLEQPFTVAFSQLREMMYQDHPYALS
TLGTENTVSQITRYDIQKFYETYFRPDNIVISIVGKISNAKAIALVEQIYGDWQPPRTLLPTLNLPRITPQPFTAKKYQE
TQQSIIMLGYLAANVNSSDYAPLKLLNTYLGNGLSSRLFVELREKRGLAYDVSAFYPTRLYTSNFTVYIGTAGENTAIAK
AGLKSEIERLVTELLSEEELEISKNKLLGQYALGKQTNSQIAQILGWYEILNLGIDFDAKFQKNLEMVTTLDTQKVAIKY
FIEPYISIVGKEK

Specific function: Unknown

COG id: COG0612

COG function: function code R; Predicted Zn-dependent peptidases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M16 family [H]

Homologues:

Organism=Homo sapiens, GI94538354, Length=421, Percent_Identity=24.2280285035629, Blast_Score=100, Evalue=4e-21,
Organism=Homo sapiens, GI46593007, Length=269, Percent_Identity=21.9330855018587, Blast_Score=89, Evalue=8e-18,
Organism=Homo sapiens, GI24308013, Length=316, Percent_Identity=20.8860759493671, Blast_Score=70, Evalue=4e-12,
Organism=Escherichia coli, GI1787770, Length=204, Percent_Identity=21.078431372549, Blast_Score=66, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI17553678, Length=373, Percent_Identity=23.5924932975871, Blast_Score=99, Evalue=4e-21,
Organism=Caenorhabditis elegans, GI71999683, Length=203, Percent_Identity=24.1379310344828, Blast_Score=84, Evalue=1e-16,
Organism=Saccharomyces cerevisiae, GI6323192, Length=216, Percent_Identity=24.537037037037, Blast_Score=79, Evalue=1e-15,
Organism=Saccharomyces cerevisiae, GI6321813, Length=216, Percent_Identity=24.0740740740741, Blast_Score=77, Evalue=4e-15,
Organism=Drosophila melanogaster, GI21357875, Length=422, Percent_Identity=22.9857819905213, Blast_Score=98, Evalue=9e-21,
Organism=Drosophila melanogaster, GI24646943, Length=422, Percent_Identity=22.9857819905213, Blast_Score=98, Evalue=9e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011249
- InterPro:   IPR011237
- InterPro:   IPR011765
- InterPro:   IPR001431
- InterPro:   IPR007863 [H]

Pfam domain/function: PF00675 Peptidase_M16; PF05193 Peptidase_M16_C [H]

EC number: 3.4.99.- [C]

Molecular weight: Translated: 46214; Mature: 46214

Theoretical pI: Translated: 5.59; Mature: 5.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINQTNINRTVLNNGIVVITAENTVADIVSAKIFLGIGSSYEAKNQAGISHLLAAVLTKG
CCCCCCCCCEEECCCEEEEEECCHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHH
TKKLSSLDIALKIESVGARLGSDTTADYFLLSIKTVSEDFNDIFQLSGEIIRCPSFPETE
HHHHHHCEEEEEEEHHHHHCCCCCCCCEEEEEEHHHHHHHHHHHHHCCCEEECCCCCCCC
IELEKRITIQSIRSQLEQPFTVAFSQLREMMYQDHPYALSTLGTENTVSQITRYDIQKFY
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHH
ETYFRPDNIVISIVGKISNAKAIALVEQIYGDWQPPRTLLPTLNLPRITPQPFTAKKYQE
HHHCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCCHHCCCCCCCCCCCCCCCHHHHHH
TQQSIIMLGYLAANVNSSDYAPLKLLNTYLGNGLSSRLFVELREKRGLAYDVSAFYPTRL
HHHHHHHHHHHEECCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEECCCCCCEE
YTSNFTVYIGTAGENTAIAKAGLKSEIERLVTELLSEEELEISKNKLLGQYALGKQTNSQ
EECCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHH
IAQILGWYEILNLGIDFDAKFQKNLEMVTTLDTQKVAIKYFIEPYISIVGKEK
HHHHHHHHHHHHCCCCCCCHHHCCCEEEEECCHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MINQTNINRTVLNNGIVVITAENTVADIVSAKIFLGIGSSYEAKNQAGISHLLAAVLTKG
CCCCCCCCCEEECCCEEEEEECCHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHH
TKKLSSLDIALKIESVGARLGSDTTADYFLLSIKTVSEDFNDIFQLSGEIIRCPSFPETE
HHHHHHCEEEEEEEHHHHHCCCCCCCCEEEEEEHHHHHHHHHHHHHCCCEEECCCCCCCC
IELEKRITIQSIRSQLEQPFTVAFSQLREMMYQDHPYALSTLGTENTVSQITRYDIQKFY
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHH
ETYFRPDNIVISIVGKISNAKAIALVEQIYGDWQPPRTLLPTLNLPRITPQPFTAKKYQE
HHHCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCCHHCCCCCCCCCCCCCCCHHHHHH
TQQSIIMLGYLAANVNSSDYAPLKLLNTYLGNGLSSRLFVELREKRGLAYDVSAFYPTRL
HHHHHHHHHHHEECCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEECCCCCCEE
YTSNFTVYIGTAGENTAIAKAGLKSEIERLVTELLSEEELEISKNKLLGQYALGKQTNSQ
EECCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHH
IAQILGWYEILNLGIDFDAKFQKNLEMVTTLDTQKVAIKYFIEPYISIVGKEK
HHHHHHHHHHHHCCCCCCCHHHCCCEEEEECCHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Zn [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Endopeptidases of unknown catalytic mechanism [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA