| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113474732
Identifier: 113474732
GI number: 113474732
Start: 1456763
End: 1457209
Strand: Direct
Name: 113474732
Synonym: Tery_0922
Alternate gene names: NA
Gene position: 1456763-1457209 (Clockwise)
Preceding gene: 113474730
Following gene: 113474734
Centisome position: 18.8
GC content: 35.79
Gene sequence:
>447_bases GTGGCTACCGTAAAACGTTCTGATAGATTACCAATGCTTCGTAAAGCTTATTTGCAGGTTTGTTCAGACCTGAAAGAAAA TGAGAAAGTTTTGTCATGGTTTGAGCAATTGTATCAAGTAACAATTCCACAAACAATTTGGTTACAGTGTGAATTGACTT TAGCTGAAGGTTTCACTAATGCAACTCGCCATGCTCATAAGTATTTGCCTAGAGAGACACCTATAGATATTGAAATTACA ATGTATACCAACTACCTCCAAATTAGAATTTGGGATTATGGTCAGCCTTTTGATTTGATAGAATGGTTAAAGGCACAACC CGATCCAGATATATTTGCTTCCGGTGGACGAGGTATAAGATTAATGTATGCCATAGCAGATCATATTAGTTATACTCGTA CATCTGATAATCGTAACTGTTTGTTAATAAGCAAAGATTATTGGTGA
Upstream 100 bases:
>100_bases CTGGAATTTATAATGTTAATTATTTACATAAATTCTATATAGATCAATTATAATATAGAAAATATACCTGATACATTATG TAATTATTGAATATAGAAGT
Downstream 100 bases:
>100_bases TATCCCCAAGTTTAAATGGCAATTCTGATTTTGAGAGAATCTGAGCTTTATTAGTTACTCTAAGAAATATTTAGGCTAGA TACTCATAAATTAAGTATAG
Product: putative anti-sigma regulatory factor, serine/threonine protein kinase
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 148; Mature: 147
Protein sequence:
>148_residues MATVKRSDRLPMLRKAYLQVCSDLKENEKVLSWFEQLYQVTIPQTIWLQCELTLAEGFTNATRHAHKYLPRETPIDIEIT MYTNYLQIRIWDYGQPFDLIEWLKAQPDPDIFASGGRGIRLMYAIADHISYTRTSDNRNCLLISKDYW
Sequences:
>Translated_148_residues MATVKRSDRLPMLRKAYLQVCSDLKENEKVLSWFEQLYQVTIPQTIWLQCELTLAEGFTNATRHAHKYLPRETPIDIEIT MYTNYLQIRIWDYGQPFDLIEWLKAQPDPDIFASGGRGIRLMYAIADHISYTRTSDNRNCLLISKDYW >Mature_147_residues ATVKRSDRLPMLRKAYLQVCSDLKENEKVLSWFEQLYQVTIPQTIWLQCELTLAEGFTNATRHAHKYLPRETPIDIEITM YTNYLQIRIWDYGQPFDLIEWLKAQPDPDIFASGGRGIRLMYAIADHISYTRTSDNRNCLLISKDYW
Specific function: Unknown
COG id: COG2172
COG function: function code T; Anti-sigma regulatory factor (Ser/Thr protein kinase)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17495; Mature: 17364
Theoretical pI: Translated: 6.77; Mature: 6.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATVKRSDRLPMLRKAYLQVCSDLKENEKVLSWFEQLYQVTIPQTIWLQCELTLAEGFTN CCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEEEEEEEEHHCCCCH ATRHAHKYLPRETPIDIEITMYTNYLQIRIWDYGQPFDLIEWLKAQPDPDIFASGGRGIR HHHHHHHHCCCCCCCEEEEEEEEEEEEEEEECCCCCHHHHHHHHCCCCCCEEECCCCCEE LMYAIADHISYTRTSDNRNCLLISKDYW EEEEEHHHHHEEECCCCCCEEEEECCCC >Mature Secondary Structure ATVKRSDRLPMLRKAYLQVCSDLKENEKVLSWFEQLYQVTIPQTIWLQCELTLAEGFTN CCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEEEEEEEEHHCCCCH ATRHAHKYLPRETPIDIEITMYTNYLQIRIWDYGQPFDLIEWLKAQPDPDIFASGGRGIR HHHHHHHHCCCCCCCEEEEEEEEEEEEEEEECCCCCHHHHHHHHCCCCCCEEECCCCCEE LMYAIADHISYTRTSDNRNCLLISKDYW EEEEEHHHHHEEECCCCCCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA