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The map label for this gene is yidS [C]

Identifier: 113474693

GI number: 113474693

Start: 1394263

End: 1395375

Strand: Direct

Name: yidS [C]

Synonym: Tery_0879

Alternate gene names: 113474693

Gene position: 1394263-1395375 (Clockwise)

Preceding gene: 113474692

Following gene: 113474695

Centisome position: 17.99

GC content: 33.78

Gene sequence:

>1113_bases
ATGTTTGATTGTATAATAGTTGGTTCCGGACCCGCAGGAGCAAGTGCTGCATATCATCTGGCAAAAAACGGACGTTCTGT
ATTAGTTTTAGAAAAAGAAACTTTACCTCGATATAAACCCTGTGGAGGTGGAGTTTCTCCTATTGTTCAAGAATGGTTTG
ATTTTGATTTTACACCAGCTATTTCTTTGAAAATTAACTCCATTTGTTATACTTGGAAAAAAGGCGATTTAGTAGAAGTA
AAATTACAAAATAAACAACCTATTTGGATGGTACGTCGAGAAATTTTTGATTATTTTATTATTCAAAAAGCACAAAAACA
AGGGGCTGAAATTAGAGATAAAACTAGAGTTATAGGTATAGAATTTAAGAACAATAATTGGCAAGTTTATACAGATAATC
AGTCATTTACTTCTCCCTATTTAATTGCTGCTGATGGTGCTAAAGGTTCAATGGCAAAATGGTTAGGATTTAAAAATCGT
AAACGTTTTGCTGGTGGAGCGATGGAAATAGAAATACCAGTTAAAAATCAGAAAATTGATAGTGCTTATTTTGAGTTTGG
GATGTTAAATAATGGCTATGTTTGGAATTTTCCTAAAGCTGATGGATACTCAATAGGGGTTGGTACATTTTGGCGAAAAC
ACGGTCAAAATTTTACGGCTTTATTAACAGAATATACGAGTATGTTTGAGGTAAATATTCAAAATGTTCAGAAGTTTGGT
CATCCTTTATGTTTATGGAATGGAAATCAAAAATTACATACTCAAAATGCTGTTTTAGCAGGAGAAGCAGCTTGTATTGT
TGACCCTTTTACTGCAGAAGGAATTCGCCCTTCTATATTTACAGGTGTTAAAGCAGCAAGAGCAATACATAATTCTCTAA
ATGGTGATTTATTTGCTTTAGAAAAGTATACTCAAATAATTAATGAAGAATGGGGGAAAGATATGGTATGGGCACAACGT
TTAGCTCAAGGATTTTCTCGTTTTTCACATATTGGTTATCAAGTAGGTGTGAAGCGACCTCATGCTACTAATATTATGAC
AAAAATTATGTCAGGAGAATTGCGTTATTCTGATGTAGTGGGTTCTGCTTTACGACGACTTTGGCAAAGGTGA

Upstream 100 bases:

>100_bases
CAGACAAAAATATTAAGGTAATTATAATTGTTTGACTGACAGGGTAGTCCCCTAAAAATGGTATATTATATTCCTTATTT
CTTATTTTTACTTGATTATA

Downstream 100 bases:

>100_bases
AAAGTAGGGAATACCATTTGATGTAAGTCAAAGTTTAACAGAAAAAGGATTAAATAATGGGGTAGCTAGTCATACAGAAA
AAAATAGCGATCGCTTATTA

Product: geranylgeranyl reductase

Products: NA

Alternate protein names: ORF3 [H]

Number of amino acids: Translated: 370; Mature: 370

Protein sequence:

>370_residues
MFDCIIVGSGPAGASAAYHLAKNGRSVLVLEKETLPRYKPCGGGVSPIVQEWFDFDFTPAISLKINSICYTWKKGDLVEV
KLQNKQPIWMVRREIFDYFIIQKAQKQGAEIRDKTRVIGIEFKNNNWQVYTDNQSFTSPYLIAADGAKGSMAKWLGFKNR
KRFAGGAMEIEIPVKNQKIDSAYFEFGMLNNGYVWNFPKADGYSIGVGTFWRKHGQNFTALLTEYTSMFEVNIQNVQKFG
HPLCLWNGNQKLHTQNAVLAGEAACIVDPFTAEGIRPSIFTGVKAARAIHNSLNGDLFALEKYTQIINEEWGKDMVWAQR
LAQGFSRFSHIGYQVGVKRPHATNIMTKIMSGELRYSDVVGSALRRLWQR

Sequences:

>Translated_370_residues
MFDCIIVGSGPAGASAAYHLAKNGRSVLVLEKETLPRYKPCGGGVSPIVQEWFDFDFTPAISLKINSICYTWKKGDLVEV
KLQNKQPIWMVRREIFDYFIIQKAQKQGAEIRDKTRVIGIEFKNNNWQVYTDNQSFTSPYLIAADGAKGSMAKWLGFKNR
KRFAGGAMEIEIPVKNQKIDSAYFEFGMLNNGYVWNFPKADGYSIGVGTFWRKHGQNFTALLTEYTSMFEVNIQNVQKFG
HPLCLWNGNQKLHTQNAVLAGEAACIVDPFTAEGIRPSIFTGVKAARAIHNSLNGDLFALEKYTQIINEEWGKDMVWAQR
LAQGFSRFSHIGYQVGVKRPHATNIMTKIMSGELRYSDVVGSALRRLWQR
>Mature_370_residues
MFDCIIVGSGPAGASAAYHLAKNGRSVLVLEKETLPRYKPCGGGVSPIVQEWFDFDFTPAISLKINSICYTWKKGDLVEV
KLQNKQPIWMVRREIFDYFIIQKAQKQGAEIRDKTRVIGIEFKNNNWQVYTDNQSFTSPYLIAADGAKGSMAKWLGFKNR
KRFAGGAMEIEIPVKNQKIDSAYFEFGMLNNGYVWNFPKADGYSIGVGTFWRKHGQNFTALLTEYTSMFEVNIQNVQKFG
HPLCLWNGNQKLHTQNAVLAGEAACIVDPFTAEGIRPSIFTGVKAARAIHNSLNGDLFALEKYTQIINEEWGKDMVWAQR
LAQGFSRFSHIGYQVGVKRPHATNIMTKIMSGELRYSDVVGSALRRLWQR

Specific function: Unknown

COG id: COG0644

COG function: function code C; Dehydrogenases (flavoproteins)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the geranylgeranyl reductase family. ChlP subfamily [H]

Homologues:

Organism=Escherichia coli, GI87082319, Length=292, Percent_Identity=27.3972602739726, Blast_Score=66, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011777
- InterPro:   IPR002938
- InterPro:   IPR003042 [H]

Pfam domain/function: PF01494 FAD_binding_3 [H]

EC number: NA

Molecular weight: Translated: 41835; Mature: 41835

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFDCIIVGSGPAGASAAYHLAKNGRSVLVLEKETLPRYKPCGGGVSPIVQEWFDFDFTPA
CEEEEEEECCCCCCHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHCCCCCCE
ISLKINSICYTWKKGDLVEVKLQNKQPIWMVRREIFDYFIIQKAQKQGAEIRDKTRVIGI
EEEEEEEEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEE
EFKNNNWQVYTDNQSFTSPYLIAADGAKGSMAKWLGFKNRKRFAGGAMEIEIPVKNQKID
EEECCCEEEEECCCCCCCCEEEEECCCCCCHHHHHCCCCCHHHCCCEEEEEEECCCCCCC
SAYFEFGMLNNGYVWNFPKADGYSIGVGTFWRKHGQNFTALLTEYTSMFEVNIQNVQKFG
HHHHHHCCCCCCEEEECCCCCCCEECHHHHHHHHCCCHHHHHHHHHHHEEEEHHHHHHCC
HPLCLWNGNQKLHTQNAVLAGEAACIVDPFTAEGIRPSIFTGVKAARAIHNSLNGDLFAL
CEEEEECCCCEEEECCEEEECCCEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEHH
EKYTQIINEEWGKDMVWAQRLAQGFSRFSHIGYQVGVKRPHATNIMTKIMSGELRYSDVV
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHCCCCHHHHHH
GSALRRLWQR
HHHHHHHHCC
>Mature Secondary Structure
MFDCIIVGSGPAGASAAYHLAKNGRSVLVLEKETLPRYKPCGGGVSPIVQEWFDFDFTPA
CEEEEEEECCCCCCHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHCCCCCCE
ISLKINSICYTWKKGDLVEVKLQNKQPIWMVRREIFDYFIIQKAQKQGAEIRDKTRVIGI
EEEEEEEEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEE
EFKNNNWQVYTDNQSFTSPYLIAADGAKGSMAKWLGFKNRKRFAGGAMEIEIPVKNQKID
EEECCCEEEEECCCCCCCCEEEEECCCCCCHHHHHCCCCCHHHCCCEEEEEEECCCCCCC
SAYFEFGMLNNGYVWNFPKADGYSIGVGTFWRKHGQNFTALLTEYTSMFEVNIQNVQKFG
HHHHHHCCCCCCEEEECCCCCCCEECHHHHHHHHCCCHHHHHHHHHHHEEEEHHHHHHCC
HPLCLWNGNQKLHTQNAVLAGEAACIVDPFTAEGIRPSIFTGVKAARAIHNSLNGDLFAL
CEEEEECCCCEEEECCEEEECCCEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEHH
EKYTQIINEEWGKDMVWAQRLAQGFSRFSHIGYQVGVKRPHATNIMTKIMSGELRYSDVV
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHCCCCHHHHHH
GSALRRLWQR
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9063468 [H]