Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474682

Identifier: 113474682

GI number: 113474682

Start: 1368592

End: 1368963

Strand: Direct

Name: 113474682

Synonym: Tery_0864

Alternate gene names: NA

Gene position: 1368592-1368963 (Clockwise)

Preceding gene: 113474677

Following gene: 113474684

Centisome position: 17.66

GC content: 27.96

Gene sequence:

>372_bases
TTGCCTACAGGTAATATTAAATTTCCTAGTTGGTTAGGGGGTATTTTTGGGTCAGTAGCATTGAATGATGAATATAATAA
TTATGGAAAATTTACCGCTTTATTTGCTACTAACGCTATTGATGGATATCTATATATTGGTTGCCAAAATTTAACTATAG
AAAATCAAGTTAAAGGACTGTTGAAAAAATTTAATTATGATACTCCTATAATTAAATTTAAGCATAAAATAGGACCTTCT
ATTTCAATACCAATTTTTACTGATGGAAAGAAATTGGTAACGGTTGGATACAATGGGGTTTATCTCTTTAATTTGAATTG
GGAATATGCTAAATCTGACGAGAAAAATGCTTTATCTAATAACAAAAAATAA

Upstream 100 bases:

>100_bases
ATAGAGAAAAAGTTTATTCTTGGAAATGGTGGGATGGTGGGTTAGTAAAATTAAATCCTAATAAAATACCTCATAAAATT
GTCAAATTTTCAAATGGTTC

Downstream 100 bases:

>100_bases
TTTTTTCGTTTAAGAGTTGAAGTAGCCGGCAAATTTGCTGGTCAAATTTATTTTGAATCTACTCCTATTGTTTGGGATGG
AATTATTAGAATTTGTGGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 123; Mature: 122

Protein sequence:

>123_residues
MPTGNIKFPSWLGGIFGSVALNDEYNNYGKFTALFATNAIDGYLYIGCQNLTIENQVKGLLKKFNYDTPIIKFKHKIGPS
ISIPIFTDGKKLVTVGYNGVYLFNLNWEYAKSDEKNALSNNKK

Sequences:

>Translated_123_residues
MPTGNIKFPSWLGGIFGSVALNDEYNNYGKFTALFATNAIDGYLYIGCQNLTIENQVKGLLKKFNYDTPIIKFKHKIGPS
ISIPIFTDGKKLVTVGYNGVYLFNLNWEYAKSDEKNALSNNKK
>Mature_122_residues
PTGNIKFPSWLGGIFGSVALNDEYNNYGKFTALFATNAIDGYLYIGCQNLTIENQVKGLLKKFNYDTPIIKFKHKIGPSI
SIPIFTDGKKLVTVGYNGVYLFNLNWEYAKSDEKNALSNNKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13797; Mature: 13666

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTGNIKFPSWLGGIFGSVALNDEYNNYGKFTALFATNAIDGYLYIGCQNLTIENQVKGL
CCCCCCCCCHHHHHHHCEEEECCCCCCCCCEEEEEEECCCCCEEEEEEECCEEHHHHHHH
LKKFNYDTPIIKFKHKIGPSISIPIFTDGKKLVTVGYNGVYLFNLNWEYAKSDEKNALSN
HHHCCCCCCEEEEEECCCCEEEEEEEECCCEEEEEECCCEEEEEECCCCCCCCCCCCCCC
NKK
CCC
>Mature Secondary Structure 
PTGNIKFPSWLGGIFGSVALNDEYNNYGKFTALFATNAIDGYLYIGCQNLTIENQVKGL
CCCCCCCCHHHHHHHCEEEECCCCCCCCCEEEEEEECCCCCEEEEEEECCEEHHHHHHH
LKKFNYDTPIIKFKHKIGPSISIPIFTDGKKLVTVGYNGVYLFNLNWEYAKSDEKNALSN
HHHCCCCCCEEEEEECCCCEEEEEEEECCCEEEEEECCCEEEEEECCCCCCCCCCCCCCC
NKK
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA