| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113474673
Identifier: 113474673
GI number: 113474673
Start: 1346434
End: 1346811
Strand: Direct
Name: 113474673
Synonym: Tery_0852
Alternate gene names: NA
Gene position: 1346434-1346811 (Clockwise)
Preceding gene: 113474664
Following gene: 113474674
Centisome position: 17.37
GC content: 31.22
Gene sequence:
>378_bases ATGAATAATAGTTCTATATCTGAAGCTACTGAAATTGATTATTTAATGACAAATAAACAATATAAAAGTGTGACAGGAGA ATGGATAGTCACCACCTTTTATGAGAGAAACTATATTGAAAATTTTTATAGGGAAACTAAGGGATGCTTGGGTTTAAAAG AATATTTTGTCAGAGATAAAACCAGTATGATGCGTCATTTTATCTTAGTTTTTGTAGCCTATACTTTCCTTCTTTACCAA CAATTAATGGGAGGCTTGAGAAAGGGTTATTCTTACACCAGTTTGACAAATTTTACAGAGACATTAGAAGCATTTATGAC TGGCTGTTTCCTACAAATTTTTTTGCTGGTTACAAGAGAATCAAGTCAGTCAGATTAA
Upstream 100 bases:
>100_bases AGCAGGAACATTAAAACAAGATATACCCAAAACAGTTTGGGTAGCTACTATAAAAGTAGAAACCAAAGGTTTAACTGGGA CTAGAACTATAGTAATCCTC
Downstream 100 bases:
>100_bases TTCATCTAAATCTCAAATATTGTCTGAGATAGTTTGATTAGGGATTTTTCATAGAAATTTGGGCTGACAAGGTTTTATTG CGATATGCGCAATAGGAGTT
Product: hypothetical protein
Products: NA
Alternate protein names: Transposase IS4 Family Protein
Number of amino acids: Translated: 125; Mature: 125
Protein sequence:
>125_residues MNNSSISEATEIDYLMTNKQYKSVTGEWIVTTFYERNYIENFYRETKGCLGLKEYFVRDKTSMMRHFILVFVAYTFLLYQ QLMGGLRKGYSYTSLTNFTETLEAFMTGCFLQIFLLVTRESSQSD
Sequences:
>Translated_125_residues MNNSSISEATEIDYLMTNKQYKSVTGEWIVTTFYERNYIENFYRETKGCLGLKEYFVRDKTSMMRHFILVFVAYTFLLYQ QLMGGLRKGYSYTSLTNFTETLEAFMTGCFLQIFLLVTRESSQSD >Mature_125_residues MNNSSISEATEIDYLMTNKQYKSVTGEWIVTTFYERNYIENFYRETKGCLGLKEYFVRDKTSMMRHFILVFVAYTFLLYQ QLMGGLRKGYSYTSLTNFTETLEAFMTGCFLQIFLLVTRESSQSD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14750; Mature: 14750
Theoretical pI: Translated: 5.87; Mature: 5.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNSSISEATEIDYLMTNKQYKSVTGEWIVTTFYERNYIENFYRETKGCLGLKEYFVRDK CCCCCHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TSMMRHFILVFVAYTFLLYQQLMGGLRKGYSYTSLTNFTETLEAFMTGCFLQIFLLVTRE HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SSQSD CCCCC >Mature Secondary Structure MNNSSISEATEIDYLMTNKQYKSVTGEWIVTTFYERNYIENFYRETKGCLGLKEYFVRDK CCCCCHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TSMMRHFILVFVAYTFLLYQQLMGGLRKGYSYTSLTNFTETLEAFMTGCFLQIFLLVTRE HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SSQSD CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA