Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474632

Identifier: 113474632

GI number: 113474632

Start: 1275919

End: 1277823

Strand: Direct

Name: 113474632

Synonym: Tery_0803

Alternate gene names: NA

Gene position: 1275919-1277823 (Clockwise)

Preceding gene: 113474631

Following gene: 113474634

Centisome position: 16.46

GC content: 41.15

Gene sequence:

>1905_bases
ATGGATAATTTTCCGCAAATCGAACCCCCTGCTGAAGGGGAAGCAGTCCAACTTATTGGCCACAACAAGAAAGAGAGTTT
TATAAATGGATCCGACGATGCTGAGGTTCTGAAGGGTAAAAAGCGTGATGATATTCTCGCTGGCTCCGGTGGAGAAGACT
GGCTCTATGGAAAACAAGGTCAAGACATCCTGCTCGGCGACAACGTACCTGACGAGACTGACTTTGACGCAGATGGCAAG
GTAACGGTCAATCATACCTCAATGAATGACTACCTTTTCGGGAATATTGGTGAGGATACTCTCATTGACCAATTCGGGAG
TGACGGTTTAATAGGTGGTCAAGGGAATGATTTGATTATTAGTATGAGTGACTCCAATATTCCCCAGGAAAATCAGACTA
TACCAGCCAACGTAGATGATGGTGATGACCTTGCTCGGCTTAATTTTTCTGATACATATATTAATCCAGACAACCTTAGC
GCTAATGACACATTGAAAGGTGGAAAGGAGGCAGATACATTTTCCTTCCAATTATTGATAAATGCTTCAAAAGAAATTGT
CGAGAAGCACACTAATGACCAGGGAGTTACCAACTGGGGAATGAATGGTGTCGCCGGAGAAAATGATAACTACCATGATC
ATTGGGTGGAAGGCATTGGGCATGATAAAATTATTGACTTTAATGCCAAGGAAGGAGACTCAATTAAAGTTTTCGGCCAT
ACAGTACAAAAGCGACTCCTTGAGAATGATGAACAATCTAAAATCGCTGTTATTGGTCTCTACAGTGATCAAGGTAATGA
TGGACAGCGAGGTGGGGGTGCTCATGACCTAGATGTTCTCGGTAAAATTGAAGTGCATTATAAAGGCAAGTTTGACTTTG
ATTCAGATGTTACTGTAGAAAATGAAGATTACGGAGCTTATGGCTTGGACAGTAATGCAATGATTGAGGAATATGATATT
CCCAATAAACTGGATGAAGCTAATACATCTGACTTTGTCGGAACTAACGGAGATGACGAAATTGAAGGTAATCTTGGCAA
AAATAAGATACAAGGTCTTCAAGGTGATGATCATCTTATTGGCCAAGCGGGGAAAGACAAGTTAGAAGGTTCAGAAGGTG
ATGATCATCTTATTGGTGATTACATACCTACAGAAGCTGATTACGATGCTGAAGGAGTACTCGACCTTCCCGAAGATGTA
GTCTACGATGACAAACTTTTTGGCGATACAGAATCTGATACTCTTGCCGATCAGTATGGGGATGATAAACTCACAGGAGG
TGATGGTAATGATAGGTTGATCAGTATTAGTGATAGTAGTATTCCTCGTGAGAACGCTAATATTCCAGCTGGTGTAGATG
ATGGTGACGACCTTAAGAAGCTTGATTTTTCCAATGAACTTATCAATCCATATAATACCGCCAGTAAGGATATTTTGACA
GGAGGTTCCGGTGCTGATACGTTTGAATGGAATCTTCTTATCAATGCCTCAAAAGACATTGTCGAGAAGCACACTGATGA
CGACGAAATCATCAACTGGGGAATGAATGGTGTGGCCGGAGAAAATGATAACTACCATGATCATTGGGTTGATGGTATTG
GAAAGGATTTAATTATGGATTTCAGTGGACAGGGTGGTGAGGATGATAAGATTATCGTCCGAGGACATACGGTTAAAGTC
AAGCTCTTGAGTGAAACGTCAGATAAGGCAGAGTTAGGTATCTACAGCGACCAAGGTAATGACGGAGAACGAGGTAATGG
TGCCCATGATTTTGATGTTCTAGGAAAAATTGTAGTCAAACATGATGGTAACTTTAACTTTGATAATGATGTACAAGTCG
TAGGGGTTGATTATGGTGCCTATGGGAATGGTGCAGAATTATATCAAGTGTTTGGACTTGAATAA

Upstream 100 bases:

>100_bases
TGAAAATTGTTGCTCTTAAAATTAAGTAATTTTTCTATTGCTAAACTAGGGTATAAAATATTATTATAGTATAAGAATAT
ACTTTTTTGAGGTAAACATT

Downstream 100 bases:

>100_bases
CTGCCGGGTCGGGTTACATAGACCTGAACTTTCCCTTTGACAAAAAACTATAATATGTGCTATAAAATAGATTTATTTGG
TAAAAAAATATATTTTCCAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 634; Mature: 634

Protein sequence:

>634_residues
MDNFPQIEPPAEGEAVQLIGHNKKESFINGSDDAEVLKGKKRDDILAGSGGEDWLYGKQGQDILLGDNVPDETDFDADGK
VTVNHTSMNDYLFGNIGEDTLIDQFGSDGLIGGQGNDLIISMSDSNIPQENQTIPANVDDGDDLARLNFSDTYINPDNLS
ANDTLKGGKEADTFSFQLLINASKEIVEKHTNDQGVTNWGMNGVAGENDNYHDHWVEGIGHDKIIDFNAKEGDSIKVFGH
TVQKRLLENDEQSKIAVIGLYSDQGNDGQRGGGAHDLDVLGKIEVHYKGKFDFDSDVTVENEDYGAYGLDSNAMIEEYDI
PNKLDEANTSDFVGTNGDDEIEGNLGKNKIQGLQGDDHLIGQAGKDKLEGSEGDDHLIGDYIPTEADYDAEGVLDLPEDV
VYDDKLFGDTESDTLADQYGDDKLTGGDGNDRLISISDSSIPRENANIPAGVDDGDDLKKLDFSNELINPYNTASKDILT
GGSGADTFEWNLLINASKDIVEKHTDDDEIINWGMNGVAGENDNYHDHWVDGIGKDLIMDFSGQGGEDDKIIVRGHTVKV
KLLSETSDKAELGIYSDQGNDGERGNGAHDFDVLGKIVVKHDGNFNFDNDVQVVGVDYGAYGNGAELYQVFGLE

Sequences:

>Translated_634_residues
MDNFPQIEPPAEGEAVQLIGHNKKESFINGSDDAEVLKGKKRDDILAGSGGEDWLYGKQGQDILLGDNVPDETDFDADGK
VTVNHTSMNDYLFGNIGEDTLIDQFGSDGLIGGQGNDLIISMSDSNIPQENQTIPANVDDGDDLARLNFSDTYINPDNLS
ANDTLKGGKEADTFSFQLLINASKEIVEKHTNDQGVTNWGMNGVAGENDNYHDHWVEGIGHDKIIDFNAKEGDSIKVFGH
TVQKRLLENDEQSKIAVIGLYSDQGNDGQRGGGAHDLDVLGKIEVHYKGKFDFDSDVTVENEDYGAYGLDSNAMIEEYDI
PNKLDEANTSDFVGTNGDDEIEGNLGKNKIQGLQGDDHLIGQAGKDKLEGSEGDDHLIGDYIPTEADYDAEGVLDLPEDV
VYDDKLFGDTESDTLADQYGDDKLTGGDGNDRLISISDSSIPRENANIPAGVDDGDDLKKLDFSNELINPYNTASKDILT
GGSGADTFEWNLLINASKDIVEKHTDDDEIINWGMNGVAGENDNYHDHWVDGIGKDLIMDFSGQGGEDDKIIVRGHTVKV
KLLSETSDKAELGIYSDQGNDGERGNGAHDFDVLGKIVVKHDGNFNFDNDVQVVGVDYGAYGNGAELYQVFGLE
>Mature_634_residues
MDNFPQIEPPAEGEAVQLIGHNKKESFINGSDDAEVLKGKKRDDILAGSGGEDWLYGKQGQDILLGDNVPDETDFDADGK
VTVNHTSMNDYLFGNIGEDTLIDQFGSDGLIGGQGNDLIISMSDSNIPQENQTIPANVDDGDDLARLNFSDTYINPDNLS
ANDTLKGGKEADTFSFQLLINASKEIVEKHTNDQGVTNWGMNGVAGENDNYHDHWVEGIGHDKIIDFNAKEGDSIKVFGH
TVQKRLLENDEQSKIAVIGLYSDQGNDGQRGGGAHDLDVLGKIEVHYKGKFDFDSDVTVENEDYGAYGLDSNAMIEEYDI
PNKLDEANTSDFVGTNGDDEIEGNLGKNKIQGLQGDDHLIGQAGKDKLEGSEGDDHLIGDYIPTEADYDAEGVLDLPEDV
VYDDKLFGDTESDTLADQYGDDKLTGGDGNDRLISISDSSIPRENANIPAGVDDGDDLKKLDFSNELINPYNTASKDILT
GGSGADTFEWNLLINASKDIVEKHTDDDEIINWGMNGVAGENDNYHDHWVDGIGKDLIMDFSGQGGEDDKIIVRGHTVKV
KLLSETSDKAELGIYSDQGNDGERGNGAHDFDVLGKIVVKHDGNFNFDNDVQVVGVDYGAYGNGAELYQVFGLE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 68814; Mature: 68814

Theoretical pI: Translated: 3.90; Mature: 3.90

Prosite motif: PS00330 HEMOLYSIN_CALCIUM

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNFPQIEPPAEGEAVQLIGHNKKESFINGSDDAEVLKGKKRDDILAGSGGEDWLYGKQG
CCCCCCCCCCCCCCEEEEEECCCHHCCCCCCCCHHHHCCCCCCCEEECCCCCCCEECCCC
QDILLGDNVPDETDFDADGKVTVNHTSMNDYLFGNIGEDTLIDQFGSDGLIGGQGNDLII
CEEEECCCCCCCCCCCCCCEEEEEECCCCCEEECCCCCHHHHHHCCCCCEECCCCCEEEE
SMSDSNIPQENQTIPANVDDGDDLARLNFSDTYINPDNLSANDTLKGGKEADTFSFQLLI
EECCCCCCCCCCCCCCCCCCCCCEEEEECCCCEECCCCCCCCCCCCCCCCCCEEEEEEEE
NASKEIVEKHTNDQGVTNWGMNGVAGENDNYHDHWVEGIGHDKIIDFNAKEGDSIKVFGH
CCCHHHHHHCCCCCCCEECCCCCCCCCCCCCHHHHHHCCCCCEEEEECCCCCCEEEEEHH
TVQKRLLENDEQSKIAVIGLYSDQGNDGQRGGGAHDLDVLGKIEVHYKGKFDFDSDVTVE
HHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCCCEEE
NEDYGAYGLDSNAMIEEYDIPNKLDEANTSDFVGTNGDDEIEGNLGKNKIQGLQGDDHLI
CCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCEE
GQAGKDKLEGSEGDDHLIGDYIPTEADYDAEGVLDLPEDVVYDDKLFGDTESDTLADQYG
CCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCHHHEECCHHCCCCCCCHHHHHCC
DDKLTGGDGNDRLISISDSSIPRENANIPAGVDDGDDLKKLDFSNELINPYNTASKDILT
CCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHCCCCCHHCCCCCCCCCCEEE
GGSGADTFEWNLLINASKDIVEKHTDDDEIINWGMNGVAGENDNYHDHWVDGIGKDLIMD
CCCCCCEEEEEEEEECCHHHHHHCCCCHHHEECCCCCCCCCCCCCCHHHHHHCCCEEEEE
FSGQGGEDDKIIVRGHTVKVKLLSETSDKAELGIYSDQGNDGERGNGAHDFDVLGKIVVK
CCCCCCCCCEEEEECCEEEEEEECCCCCCCEEEEECCCCCCCCCCCCCCCHHHHEEEEEE
HDGNFNFDNDVQVVGVDYGAYGNGAELYQVFGLE
ECCCCCCCCCEEEEEEECCCCCCCCCEEEEECCC
>Mature Secondary Structure
MDNFPQIEPPAEGEAVQLIGHNKKESFINGSDDAEVLKGKKRDDILAGSGGEDWLYGKQG
CCCCCCCCCCCCCCEEEEEECCCHHCCCCCCCCHHHHCCCCCCCEEECCCCCCCEECCCC
QDILLGDNVPDETDFDADGKVTVNHTSMNDYLFGNIGEDTLIDQFGSDGLIGGQGNDLII
CEEEECCCCCCCCCCCCCCEEEEEECCCCCEEECCCCCHHHHHHCCCCCEECCCCCEEEE
SMSDSNIPQENQTIPANVDDGDDLARLNFSDTYINPDNLSANDTLKGGKEADTFSFQLLI
EECCCCCCCCCCCCCCCCCCCCCEEEEECCCCEECCCCCCCCCCCCCCCCCCEEEEEEEE
NASKEIVEKHTNDQGVTNWGMNGVAGENDNYHDHWVEGIGHDKIIDFNAKEGDSIKVFGH
CCCHHHHHHCCCCCCCEECCCCCCCCCCCCCHHHHHHCCCCCEEEEECCCCCCEEEEEHH
TVQKRLLENDEQSKIAVIGLYSDQGNDGQRGGGAHDLDVLGKIEVHYKGKFDFDSDVTVE
HHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCCCEEE
NEDYGAYGLDSNAMIEEYDIPNKLDEANTSDFVGTNGDDEIEGNLGKNKIQGLQGDDHLI
CCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCEE
GQAGKDKLEGSEGDDHLIGDYIPTEADYDAEGVLDLPEDVVYDDKLFGDTESDTLADQYG
CCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCHHHEECCHHCCCCCCCHHHHHCC
DDKLTGGDGNDRLISISDSSIPRENANIPAGVDDGDDLKKLDFSNELINPYNTASKDILT
CCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHCCCCCHHCCCCCCCCCCEEE
GGSGADTFEWNLLINASKDIVEKHTDDDEIINWGMNGVAGENDNYHDHWVDGIGKDLIMD
CCCCCCEEEEEEEEECCHHHHHHCCCCHHHEECCCCCCCCCCCCCCHHHHHHCCCEEEEE
FSGQGGEDDKIIVRGHTVKVKLLSETSDKAELGIYSDQGNDGERGNGAHDFDVLGKIVVK
CCCCCCCCCEEEEECCEEEEEEECCCCCCCEEEEECCCCCCCCCCCCCCCHHHHEEEEEE
HDGNFNFDNDVQVVGVDYGAYGNGAELYQVFGLE
ECCCCCCCCCEEEEEEECCCCCCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA