Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474597

Identifier: 113474597

GI number: 113474597

Start: 1216100

End: 1217077

Strand: Direct

Name: 113474597

Synonym: Tery_0757

Alternate gene names: NA

Gene position: 1216100-1217077 (Clockwise)

Preceding gene: 113474596

Following gene: 113474598

Centisome position: 15.69

GC content: 32.11

Gene sequence:

>978_bases
ATGTTTATTTTTTCACAGGGATTATTTAAATTTGATTTTACAGACCATCATGCAATTTTAGGAGTTTCTCTGGATGCGGA
GTTTGATGAGATTCGGAAAAGATATATGTGGCTGGCACGTCGTTTACACCCTGATACCTGTCCTTTTGAAAAGGATATAG
ATAAGGAATTGGCTAATGAGTTATTATCTAAATTTGTGAGTCCAGCTTATAATAAATTTTCTAAGAAAAAGGAGCGCGCT
GAACTTTTTGTCGTCCTTAAGGAATTAAGGAATAATATTACTTATAACCGTAGTCAGATTGAACTGAAAACTGATATAGC
TAAACAAATTGCTCACGGGGGAAATTACAAAAAAACATATAAATTAGCTATTCAAGAATTGAGCGATCGCCAGTATCAAT
ATTTAGATAAAACTTTAGAAATTACAGGAGAAATTAGTGAGCTAAACTTAGCTTATCTTCTACGTAAACAAACTCAAAAT
CAAGATTATGTAATGCCACAGCGACCACCAACACAACCACCTAAAGATAACAATAAATCTACAACTATAAAACCAAAGGC
TCAAAATTCTTTGGTAGATCAAGCTTGCCGTCGTGCAGAAACTTTCATTTCTACGAAAAATTATGCTCAAGCAATTTTGG
AGTTGAAAGGTACTCTAAAAACAGATCCAAATGATAGTCGTTATCATGCTTTATTAGGATTTTGCTATTTACACCAAAAT
CAAAATACAATGGCAAAAATTGAAATTAAAAAAGCTCTATCATTAAACCCTAAAGATCCAAAAGCATTAGAGGTACAAAA
AATATTGGAACAAGCTAAATCTAGTAATAATGATAGGAAAAAAACAGGTAAAGTAGCAAGTAAAACTAAACAGAAAGTAA
ATAAAACTGAGGTAGCAAGTAAAACTAAACAGAAAGTAAATAAAACTGAGCAAGCGGGTGGTTTATTTGGAGCTCTTTTT
GGCAGGAATAAAAAGTAA

Upstream 100 bases:

>100_bases
AATCCTTGTAGGAATGTTTCATAGAACTTCTGTATTTTTGTCTACTAATTATGAACAATACTATAAATTACATTTAATAG
AAATTTGAGGAGTATTTATA

Downstream 100 bases:

>100_bases
GGAATAAAAATGTTTTTAAAGGTTATAGGCTAAGAGCACAGATACCTCATTCCTACCTAATAACTCTAGCTCTTAATTCC
TATGACCAGGGGACGACTTT

Product: heat shock protein DnaJ-like

Products: NA

Alternate protein names: Heat Shock Protein DNAJ-Like; Heat Shock Protein DNAJ Domain Protein; DNAJ Domain-Containing Protein; DNAJ-Like Protein; Tetratricopeptide Repeat Domain Protein

Number of amino acids: Translated: 325; Mature: 325

Protein sequence:

>325_residues
MFIFSQGLFKFDFTDHHAILGVSLDAEFDEIRKRYMWLARRLHPDTCPFEKDIDKELANELLSKFVSPAYNKFSKKKERA
ELFVVLKELRNNITYNRSQIELKTDIAKQIAHGGNYKKTYKLAIQELSDRQYQYLDKTLEITGEISELNLAYLLRKQTQN
QDYVMPQRPPTQPPKDNNKSTTIKPKAQNSLVDQACRRAETFISTKNYAQAILELKGTLKTDPNDSRYHALLGFCYLHQN
QNTMAKIEIKKALSLNPKDPKALEVQKILEQAKSSNNDRKKTGKVASKTKQKVNKTEVASKTKQKVNKTEQAGGLFGALF
GRNKK

Sequences:

>Translated_325_residues
MFIFSQGLFKFDFTDHHAILGVSLDAEFDEIRKRYMWLARRLHPDTCPFEKDIDKELANELLSKFVSPAYNKFSKKKERA
ELFVVLKELRNNITYNRSQIELKTDIAKQIAHGGNYKKTYKLAIQELSDRQYQYLDKTLEITGEISELNLAYLLRKQTQN
QDYVMPQRPPTQPPKDNNKSTTIKPKAQNSLVDQACRRAETFISTKNYAQAILELKGTLKTDPNDSRYHALLGFCYLHQN
QNTMAKIEIKKALSLNPKDPKALEVQKILEQAKSSNNDRKKTGKVASKTKQKVNKTEVASKTKQKVNKTEQAGGLFGALF
GRNKK
>Mature_325_residues
MFIFSQGLFKFDFTDHHAILGVSLDAEFDEIRKRYMWLARRLHPDTCPFEKDIDKELANELLSKFVSPAYNKFSKKKERA
ELFVVLKELRNNITYNRSQIELKTDIAKQIAHGGNYKKTYKLAIQELSDRQYQYLDKTLEITGEISELNLAYLLRKQTQN
QDYVMPQRPPTQPPKDNNKSTTIKPKAQNSLVDQACRRAETFISTKNYAQAILELKGTLKTDPNDSRYHALLGFCYLHQN
QNTMAKIEIKKALSLNPKDPKALEVQKILEQAKSSNNDRKKTGKVASKTKQKVNKTEVASKTKQKVNKTEQAGGLFGALF
GRNKK

Specific function: Unknown

COG id: COG2214

COG function: function code O; DnaJ-class molecular chaperone

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37396; Mature: 37396

Theoretical pI: Translated: 10.30; Mature: 10.30

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION ; PS50076 DNAJ_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFIFSQGLFKFDFTDHHAILGVSLDAEFDEIRKRYMWLARRLHPDTCPFEKDIDKELANE
CCEECCCCEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
LLSKFVSPAYNKFSKKKERAELFVVLKELRNNITYNRSQIELKTDIAKQIAHGGNYKKTY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHH
KLAIQELSDRQYQYLDKTLEITGEISELNLAYLLRKQTQNQDYVMPQRPPTQPPKDNNKS
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
TTIKPKAQNSLVDQACRRAETFISTKNYAQAILELKGTLKTDPNDSRYHALLGFCYLHQN
CEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCC
QNTMAKIEIKKALSLNPKDPKALEVQKILEQAKSSNNDRKKTGKVASKTKQKVNKTEVAS
CCCEEEEEEHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
KTKQKVNKTEQAGGLFGALFGRNKK
HHHHHHHHHHHHCCHHHHHHCCCCC
>Mature Secondary Structure
MFIFSQGLFKFDFTDHHAILGVSLDAEFDEIRKRYMWLARRLHPDTCPFEKDIDKELANE
CCEECCCCEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
LLSKFVSPAYNKFSKKKERAELFVVLKELRNNITYNRSQIELKTDIAKQIAHGGNYKKTY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHH
KLAIQELSDRQYQYLDKTLEITGEISELNLAYLLRKQTQNQDYVMPQRPPTQPPKDNNKS
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
TTIKPKAQNSLVDQACRRAETFISTKNYAQAILELKGTLKTDPNDSRYHALLGFCYLHQN
CEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCC
QNTMAKIEIKKALSLNPKDPKALEVQKILEQAKSSNNDRKKTGKVASKTKQKVNKTEVAS
CCCEEEEEEHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
KTKQKVNKTEQAGGLFGALFGRNKK
HHHHHHHHHHHHCCHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA