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The map label for this gene is nucH [H]

Identifier: 113474595

GI number: 113474595

Start: 1213870

End: 1214370

Strand: Direct

Name: nucH [H]

Synonym: Tery_0755

Alternate gene names: 113474595

Gene position: 1213870-1214370 (Clockwise)

Preceding gene: 113474594

Following gene: 113474596

Centisome position: 15.66

GC content: 36.53

Gene sequence:

>501_bases
ATGGCCTCCATATTTTTAGTTAGTTGTCAAAACCATTACTTTAACTCAGACAAAATGACTAGAGTAGAAAGGGTGGTTAG
TGGCCAAACTATAGAAATAGCTGACCGTTCCGTGGCTGTACCTGTACTAGAACCAATTCGCCTAATTGGTATTCAAGCGC
CAGATATTAGACAAAAACCTTGGGGACAAGAAGCAAAAATTCAACTAGAAAAATTAACTTTGGGGCAAGAAGTATTCTTA
GAATTTGATGTTGAGGAGAAAGATAGATTCGATAACCTACTAGCTTATGTTTGGCTAGAAAAAAAACTAATCAATGAATT
TTTGGTAAAAGAAGGTTGGGCTTTAGCAAAGCCAGATTTTCCTAATACTAAGTACATGGAACGTCTAATTCATGCTCAAG
AAAGAGCTAGAATTATGGGACTAGGTATTTGGAACCCAGACCAACCAATGCGTCAAACTCCTGCACAATTTCGTAGACAA
AATCTTGATAAAAAAAGATAG

Upstream 100 bases:

>100_bases
GAAGATGAAGTGTATGAACTACAATTTGGTCGCTACTTTGGTAAAGGAAAGATGCGAATTGGACTGCCATTGGATGAAGA
CTAGAATAATTTATCTACTT

Downstream 100 bases:

>100_bases
TAGATTTTAGTTAGAATTCTCCAGTCGTTTTTAGGCGCGGTGAGAATTCTATTAAGCTCAAACTCAGGGAAGTTTAAAAC
TGCAAAAGCAACTCTTTTCA

Product: nuclease

Products: NA

Alternate protein names: TNase; Micrococcal nuclease; Staphylococcal nuclease [H]

Number of amino acids: Translated: 166; Mature: 165

Protein sequence:

>166_residues
MASIFLVSCQNHYFNSDKMTRVERVVSGQTIEIADRSVAVPVLEPIRLIGIQAPDIRQKPWGQEAKIQLEKLTLGQEVFL
EFDVEEKDRFDNLLAYVWLEKKLINEFLVKEGWALAKPDFPNTKYMERLIHAQERARIMGLGIWNPDQPMRQTPAQFRRQ
NLDKKR

Sequences:

>Translated_166_residues
MASIFLVSCQNHYFNSDKMTRVERVVSGQTIEIADRSVAVPVLEPIRLIGIQAPDIRQKPWGQEAKIQLEKLTLGQEVFL
EFDVEEKDRFDNLLAYVWLEKKLINEFLVKEGWALAKPDFPNTKYMERLIHAQERARIMGLGIWNPDQPMRQTPAQFRRQ
NLDKKR
>Mature_165_residues
ASIFLVSCQNHYFNSDKMTRVERVVSGQTIEIADRSVAVPVLEPIRLIGIQAPDIRQKPWGQEAKIQLEKLTLGQEVFLE
FDVEEKDRFDNLLAYVWLEKKLINEFLVKEGWALAKPDFPNTKYMERLIHAQERARIMGLGIWNPDQPMRQTPAQFRRQN
LDKKR

Specific function: Enzyme that catalyzes the hydrolysis of both DNA and RNA at the 5'-position of the phosphodiester bond [H]

COG id: COG1525

COG function: function code L; Micrococcal nuclease (thermonuclease) homologs

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the thermonuclease family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016071
- InterPro:   IPR006021
- InterPro:   IPR002071 [H]

Pfam domain/function: PF00565 SNase [H]

EC number: =3.1.31.1 [H]

Molecular weight: Translated: 19467; Mature: 19336

Theoretical pI: Translated: 9.07; Mature: 9.07

Prosite motif: PS50830 TNASE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASIFLVSCQNHYFNSDKMTRVERVVSGQTIEIADRSVAVPVLEPIRLIGIQAPDIRQKP
CCEEEEEECCCCEECCHHHHHHHHHHCCCEEEECCCEEECHHHHHHHHHCCCCCCCCCCC
WGQEAKIQLEKLTLGQEVFLEFDVEEKDRFDNLLAYVWLEKKLINEFLVKEGWALAKPDF
CCCCHHEEEEHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCC
PNTKYMERLIHAQERARIMGLGIWNPDQPMRQTPAQFRRQNLDKKR
CCHHHHHHHHHHHHHCEEEEEECCCCCCHHHCCHHHHHHHCCCCCC
>Mature Secondary Structure 
ASIFLVSCQNHYFNSDKMTRVERVVSGQTIEIADRSVAVPVLEPIRLIGIQAPDIRQKP
CEEEEEECCCCEECCHHHHHHHHHHCCCEEEECCCEEECHHHHHHHHHCCCCCCCCCCC
WGQEAKIQLEKLTLGQEVFLEFDVEEKDRFDNLLAYVWLEKKLINEFLVKEGWALAKPDF
CCCCHHEEEEHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCC
PNTKYMERLIHAQERARIMGLGIWNPDQPMRQTPAQFRRQNLDKKR
CCHHHHHHHHHHHHHCEEEEEECCCCCCHHHCCHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8045422 [H]